Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac10g2369 | ATGTCTTCTGGGGCTCGATTGCTCGTGTTGGATTTCGCCCTCGCTTTTATGTGGGTATGGTCGGGGATTTTGGTTAAGATCTTTGTTTTTGGGATATTGGGGTTCGGAAATGATCTGGTCAGTGAGGTTGTCAAGGCTACTTTTTCGATTCTCAACATGTTTTTGTTTGCGTTCTTGGTGAAGATCTCCAAAGGGGCGGCTTACAATCCTCTTAGCGTCTTGTCTGCTGCTTTTTCTCGGGATTTCAGTAGCTTTCTCTTCATTGCTGGTTCCAGAATCCCTGCCCAGGTACTTGGAGCTATTACTGGCGTTAGGTCGATTATCCATACGTTCCCCGAAGCAGGACGAGGGCCTCGTTTGAATGTTGGCATCCATCACGGTGCTCTGACAGAAGGACTGTTAACGTACGTCATCGTCATGATCTCACTTGGACTTTCTAAGAAAATCCCTGGAAGTTTCTTCATGAAGACTTGGATCTCAAGTCTCTCCAAGTTAGCTCTTCACATTCTCGGTTCCGACTTAACCGGTGGCTGTATGAACCCTGCATCTGTAATGGGATGGGCATATGCTCGTGGCGAACATATAACAAAGGAACACATTCTTGTATACTGGATTGCTCCGATTCAAGGAACTATACTTGCGGTATGGACGTTTAAGTTACTATTTCGAGAACCGAAAGAGGAGAAAGTAAACACGAAGAAGAAATCGGACTGA | 714 | 45.52 | MSSGARLLVLDFALAFMWVWSGILVKIFVFGILGFGNDLVSEVVKATFSILNMFLFAFLVKISKGAAYNPLSVLSAAFSRDFSSFLFIAGSRIPAQVLGAITGVRSIIHTFPEAGRGPRLNVGIHHGALTEGLLTYVIVMISLGLSKKIPGSFFMKTWISSLSKLALHILGSDLTGGCMNPASVMGWAYARGEHITKEHILVYWIAPIQGTILAVWTFKLLFREPKEEKVNTKKKSD | 237 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 36450300 | 36453998 | - | Lag0026414.1 | Lac10g2369 | 584900 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac10g2369 | 237 | PANTHER | AQUAPORIN SIP2-1-RELATED | 3 | 237 | IPR044226 | GO:0015267(InterPro) | |
| Lac10g2369 | 237 | Pfam | Major intrinsic protein | 48 | 217 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Lac10g2369 | 237 | Gene3D | Glycerol uptake facilitator protein. | 3 | 237 | IPR023271 | - | |
| Lac10g2369 | 237 | PRINTS | Major intrinsic protein family signature | 161 | 183 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Lac10g2369 | 237 | PRINTS | Major intrinsic protein family signature | 201 | 221 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Lac10g2369 | 237 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Lac10g2369 | 237 | PRINTS | Major intrinsic protein family signature | 88 | 107 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Lac10g2369 | 237 | PRINTS | Major intrinsic protein family signature | 130 | 148 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Lac10g2369 | 237 | SUPERFAMILY | Aquaporin-like | 6 | 235 | IPR023271 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac10g2369 | K09875 | - | csv:101214379 | 408.683 |