Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2390 ATGGAGATCTTACAGGCGCTCGATGCTCAAGTTCTCATTGGTTTAGCAGCGGCCCTGCTTGCCATTGTTGCTGGTGCTATTGTCCTCTTTTCCTCCAGAAAACCCGCCTCTAGAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAACTTGTTAAGCGTACAAAGCTGAGCCATAATGTGGCGAAGTTCACTTTTATTCTTCCGATGCCCGATTCAATTCTTGGTCTTCCTATTGGACAACATTTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAACTACTTTGGACTCTGATGTTGGATACTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACATCATTTTCGAGAAATGCGTGTTGGGGATTATCTTGCTGTAAAGGGACCAAAGGGACGTTTTAAGTATCAACCCGGTCAAGTTAGGGCATTGGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGAAGAATTGGATCTTCTTGCCCGTAGATACCCTGATCGCTTCAAGATCTACTTCGTGTTGAACCAGCCTCCTGAAGTTTGGGATGGTGGCGTTGGCTTTGTAACCAAGGAAATGATTCAAGCGCATTGCCCTGCACCTGCCGCTGACATTCAGATTCTACGATGCGGCCCGCCACCGATGAACAAGGCCATGGCTGCACACCTTGATGAACTCGGCTATACACCTGAAATGCAGTTTCAATTCTAA 753 46.35 MEILQALDAQVLIGLAAALLAIVAGAIVLFSSRKPASRACLDPENFKEFKLVKRTKLSHNVAKFTFILPMPDSILGLPIGQHLSCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFKYQPGQVRALGMLAGGSGITPMYQEELDLLARRYPDRFKIYFVLNQPPEVWDGGVGFVTKEMIQAHCPAPAADIQILRCGPPPMNKAMAAHLDELGYTPEMQFQF 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36703378 36707812 + Lag0026435.1 Lac10g2390 584921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2390 250 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 44 148 IPR017927 GO:0016491(InterPro)
Lac10g2390 250 FunFam NADH-cytochrome b5 reductase 169 250 - -
Lac10g2390 250 PRINTS Cytochrome B5 reductase signature 133 147 - -
Lac10g2390 250 PRINTS Cytochrome B5 reductase signature 97 104 - -
Lac10g2390 250 PRINTS Cytochrome B5 reductase signature 156 175 - -
Lac10g2390 250 PRINTS Cytochrome B5 reductase signature 75 86 - -
Lac10g2390 250 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 136 246 IPR039261 -
Lac10g2390 250 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 169 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Lac10g2390 250 Gene3D - 167 250 IPR039261 -
Lac10g2390 250 FunFam NADH-cytochrome b5 reductase 39 138 - -
Lac10g2390 250 SUPERFAMILY Riboflavin synthase domain-like 41 149 IPR017938 -
Lac10g2390 250 CDD cyt_b5_reduct_like 49 250 - -
Lac10g2390 250 Pfam Oxidoreductase NAD-binding domain 167 233 IPR001433 GO:0016491(InterPro)
Lac10g2390 250 Gene3D Translation factors 36 141 - -
Lac10g2390 250 Pfam Oxidoreductase FAD-binding domain 49 147 IPR008333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2390 Lac-Chr10:36703378 Lac9g2955 Lac-Chr9:47301682 6.80E-91 dispersed
Lac1g1605 Lac-Chr1:37275908 Lac10g2390 Lac-Chr10:36703378 3.40E-112 wgd
Lac10g2390 Lac-Chr10:36703378 Lac13g2348 Lac-Chr13:37259634 2.50E-08 wgd
Lac10g2390 Lac-Chr10:36703378 Lac13g1753 Lac-Chr13:20110957 1.40E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2390 K00326 - csv:101212931 445.662