Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2545 ATGGAGGCCATGCCCAGCATCCTTGACAACACCTCTCCTTATCAATTTTGGTGCTTTTGGTTCATCATTGCCATCCTCCTCCATCTCTTCCTCAAAAAACATCTCCCAAAACCTAAACCCTCATCTTCTACCATCCTCGCGCCGCCCGCCCTCCCTCTCATCGGTCACCTCCACCTCCTGACCCCGGTTCTAGTTACCTCCTTCCAAGCGCTAGCTCGCCGCTACGGCCCCCTCATCGAGCTCCGACTTGGCGCATCAAAGTGCGTCATTGTATCTAATGCCGCAGTCGCCAAAGAGATCCTCAAAACTCACGAACACAACTTCCTATCTCGACCCGAGTTCGGCGCATCCGAGTACTTCATCTACCAAGGGTCCAGATTCGTCCTAGCCCCCTATGGACCCTACTGGCGATTCATGAAGAAACTAACTATGACACGGCTTCTCTCGCCGTCGCAGTTGGCAGCCTCCACCGCCATCCGCGGCGACGAGGTGGCGAAGCTAGTGGAGAGAATAGAGGCAAATTCAAGAGAAAAGAAGCCCTCGGATTTGAGATTGGAATTTACCACTTTGACAAACAACATCATCTCGAGGATGCTTTTGAGCACAAGGTGCTCTGGTGGGAAAGATGAGGCCCAAGAGATTAAGGACTTGGTGTGGAGTATCAATAGGCTGGCTGGGAAGTTGAGTATGGGGGACATTTTGGGACCTTTGAAAGTGCTTGATTTCTCTGGAAATGGAAGGAAGTTTGTGAGAACTATGAACAGATTTGATGGGTTGGTGGAGAAGATAATGAAGGAGCATGAAGACAACAACAAGGCTGCCATTAATGGCGGTGGAGATGTGGAGAGAAGAAGAGATTTGTTGGATATCTTGCTGGAGATTTACAATGATCCAGATGCTGAGATGAAGATAACCAGAAAAGATATCAAGTCCTTCTTGCTTGTGAGTTTTTAA 954 49.06 MEAMPSILDNTSPYQFWCFWFIIAILLHLFLKKHLPKPKPSSSTILAPPALPLIGHLHLLTPVLVTSFQALARRYGPLIELRLGASKCVIVSNAAVAKEILKTHEHNFLSRPEFGASEYFIYQGSRFVLAPYGPYWRFMKKLTMTRLLSPSQLAASTAIRGDEVAKLVERIEANSREKKPSDLRLEFTTLTNNIISRMLLSTRCSGGKDEAQEIKDLVWSINRLAGKLSMGDILGPLKVLDFSGNGRKFVRTMNRFDGLVEKIMKEHEDNNKAAINGGGDVERRRDLLDILLEIYNDPDAEMKITRKDIKSFLLVSF 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39435499 39436452 - Lag0026590.1 Lac10g2545 585076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2545 317 Gene3D Cytochrome P450 31 317 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2545 317 SUPERFAMILY Cytochrome P450 47 315 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2545 317 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2545 317 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2545 317 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2545 317 Pfam Cytochrome P450 48 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2545 317 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 315 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2545 Lac-Chr10:39435499 Lac11g0533 Lac-Chr11:5498410 6.90E-64 dispersed
Lac10g2543 Lac-Chr10:39421749 Lac10g2545 Lac-Chr10:39435499 3.50E-52 proximal
Lac10g2545 Lac-Chr10:39435499 Lac10g2551 Lac-Chr10:39485491 1.30E-160 proximal
Lac10g2545 Lac-Chr10:39435499 Lac2g0256 Lac-Chr2:1933022 3.10E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2545 - - - 0.0