Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2551 ATGGAAGCCCTTGCCACCATCTTTGACAACATCTCTTCCCCTCAATATTGGTGTTTTTGGTTCATCACTGCCCTCTTCCTCCATCTCTTCCTAAAAAAATATCTCCCAAAACCTAAACCCTCATCATCCTCCGATGTCCACGCGCCGCCACCGACTCCACCGGCCCTCCCTCTCATCGGCCATCTCCACCTCCTGACTCCTGTTCTTGTTACCTCCTTCCAAACCCTAGCTCGTCGCTATGGCCCCCTCATCGAGCTTCGACTCGGAGCATCAAAGTGTGTCGTCGTCTCTACAGCCACAGTCGCGAAAGAGATCCTCAAAACTCACGAGCACAACTTCCTCTCCCGACCGGAGTTCGGCGCGTCTGAGTACTTCATCTACCAAGGGTCGAGATTCGTATTAGCCTCCTACGGACCCTACTGGCGATTCATGAAGAAGCTAATCATGACACGACTTCTCTCGCCGCCGCAGCTGGCAGTCTCTGCTGCCATCCGCGGCGACGAGGTAGTGAAGCTAGTGGAGAGAATAGAGGCAAATTCAAGGGAAAAGAAGCCCTCAGATTTGAAATTGGAATTTACCACTTTGGCAAACAACATCATATCAAGGATGGCTTTGAGCACAAGGTGCTGTGGTGGGAAAGATGAGGCTCAAGAGATTAAGGACTTGGTGTGGAGTATCAATAGGCTGGCTGGGAAGTTGAGTATGGGGGACATTTTGGGACCTTTGAAAGTGCTTGATTTCTCTGGAAATGGAAGGAAGTTTGTGAGAACTATGAACAGATTTGATGGGTTGGTGGAGAAGATAATGAAGGAGCATGAAGACAACAACAAGGCTGCCATTAATGGCGGTGGAGATATGGAGAGAAGAAGAGATTTGTTGGATATCTTGCTGGAGATTTACAACGATCCAGATGCTGAGATGAGGATAACCAGAAAAGATATCAAGTCCTTCTTGCTTGTGAGTTTCTAA 969 48.61 MEALATIFDNISSPQYWCFWFITALFLHLFLKKYLPKPKPSSSSDVHAPPPTPPALPLIGHLHLLTPVLVTSFQTLARRYGPLIELRLGASKCVVVSTATVAKEILKTHEHNFLSRPEFGASEYFIYQGSRFVLASYGPYWRFMKKLIMTRLLSPPQLAVSAAIRGDEVVKLVERIEANSREKKPSDLKLEFTTLANNIISRMALSTRCCGGKDEAQEIKDLVWSINRLAGKLSMGDILGPLKVLDFSGNGRKFVRTMNRFDGLVEKIMKEHEDNNKAAINGGGDMERRRDLLDILLEIYNDPDAEMRITRKDIKSFLLVSF 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39485491 39486459 - Lag0026596.1 Lac10g2551 585082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2551 322 Gene3D Cytochrome P450 41 322 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2551 322 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 24 320 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lac10g2551 322 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2551 322 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2551 322 Pfam Cytochrome P450 50 317 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2551 322 SUPERFAMILY Cytochrome P450 49 320 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2551 Lac-Chr10:39485491 Lac11g0533 Lac-Chr11:5498410 2.90E-62 dispersed
Lac10g2545 Lac-Chr10:39435499 Lac10g2551 Lac-Chr10:39485491 1.30E-160 proximal
Lac10g2551 Lac-Chr10:39485491 Lac11g2230 Lac-Chr11:38343552 3.60E-20 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2551 - - - 0.0