Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2621 ATGGAAATCGACTCACAGAAGAATCTTCAGCGCAAGCAGTGTACCTATCAAATATCGGATGAGCAGTACAAGGTTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCAATTGTCTCTAAGTGGAAACCTCATTTACCTGTTTGTACTGTATTGGGATTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCCTGTACAAGCACATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGAGATCTGCCACCCCACTCGTTCAGCCACACAACTTTATGCACCCAGACGATCACCTAGTTTTGGAAGATGAAAGTGGGAGAGTCAAGCTTTCCGGGGCTGTGCTTATACCTTCTGTATATGTTACTGGGATTGTTGTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCACTCATATCAAGTGAAGATAAGTACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAAAAGGAACAAGGGATTGCAGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCTGTCGAAATTCCCCGTGCACTTTTAAATGGACAGCATTTGTCTGCAAAGGACCAAGAGAAGCTGACAGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCAGGTTCCAGTGACCCAGCCAATTTTTCCTTACCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAACATAGATGATCTTGAGAAGTATTCAGAGGCTAAAGATAAGCTTGAATTTCTGGAGAGGACATTGAGCTGGAGGCATCTGGCTCCAACTACTCCAAATACTCTTGGTTGCTATCCTTTCACTGATCGAGATCCCTTTCTGATCGAGAGCTGTCCCCATGTTTATTTTATTGGCAATCAAGACAAGTTCGATACTCGCTTAATAAAGGGATCTGAAGGGCAGATGGTTAGACTCATTTCGATTCCAAGATTTTGTGAGAAGGGAGTTGCCGTAATGCTTAACCTGAGAAATCTTGAATGCCACACTGTGAGTTTTGGGACTGAATTCAGCTGA 1317 43.36 MEIDSQKNLQRKQCTYQISDEQYKVQKETYKGQQYSHIYFARLHLMRTILHSIVSKWKPHLPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLEDESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVVFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALLNGQHLSAKDQEKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTTPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMLNLRNLECHTVSFGTEFS 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40343358 40349331 + Lag0026666.1 Lac10g2621 585152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2621 438 CDD MPP_PolD2_C 181 433 IPR041863 -
Lac10g2621 438 Gene3D - 41 164 - -
Lac10g2621 438 Gene3D - 169 437 - -
Lac10g2621 438 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Lac10g2621 438 FunFam DNA polymerase delta subunit 2 40 164 - -
Lac10g2621 438 FunFam DNA polymerase delta small subunit 169 438 - -
Lac10g2621 438 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 5 431 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Lac10g2621 438 Pfam DNA polymerase alpha/epsilon subunit B 182 393 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2621 K02328 - csv:101221438 839.721