Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2877 ATGGGATTTTCAACTCACAGAGACCTTCTCTCTCAGTTTATGCGAACCATCTCCGACGAAACTTACCTACGCGACATCGTCGTCAGCTTCCTTTTGGCCGGCCGCGACACCGTGGCTTCCGCCTTGACCAGCTTCTTCTGGGTTCTTTCCGCCCACCCCGCCGTCGAGACCGCCATCCAGCTCGAAGCTGACCGGGTCATCGGACCCGACTCTGACCCGACAAATTTCAACCAAATCCGAAACCTTCACTACTTACAAGCCGCCATTTTCGAGTCCATGAGGCTCTACCCGCCGATTCAATTCGACTCCAAGTTTTGCCAAAACGACGACGTTTTGCCCGACGGGACTTTCGTCCGACGTGGCACTCGGGTCACTTACCATCCGTATGCCATGGGTCGGGTCGAGGAGATTTGGGGTCCGGACTGTCTTGAGTTCGACCCGACCCGGTGGCTCAGAGACGGCGTTTTCTGCCCGGAGAATCCCTTCAAGTACCCGGTTTTTCAAGGTGGGTTTCGATTTTGTTTGGGGAAGGATATGGCGCTTGTTGAGTTGAAAACCGTCGCGCTTTCGCTTATTCGACGGTTTCGGTTTCGGTCGGTGATGCCATCTGCGGCGCTGCGGTTCTCTCCCGGCCTCACCGCCACCTTCCACGGCGGGTTTCGAGTTTTTGTTAGTGAGAAGAAGAAGAAGAAACCGAGTTGA 702 55.27 MGFSTHRDLLSQFMRTISDETYLRDIVVSFLLAGRDTVASALTSFFWVLSAHPAVETAIQLEADRVIGPDSDPTNFNQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDVLPDGTFVRRGTRVTYHPYAMGRVEEIWGPDCLEFDPTRWLRDGVFCPENPFKYPVFQGGFRFCLGKDMALVELKTVALSLIRRFRFRSVMPSAALRFSPGLTATFHGGFRVFVSEKKKKKPS 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43301779 43302480 + Lag0026922.1 Lac10g2877 585408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2877 233 Gene3D Cytochrome P450 3 214 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PANTHER CYTOCHROME P450 8 218 - -
Lac10g2877 233 Pfam Cytochrome P450 6 199 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS E-class P450 group I signature 22 39 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS E-class P450 group I signature 42 68 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS E-class P450 group I signature 86 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS E-class P450 group I signature 164 174 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS E-class P450 group I signature 174 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 SUPERFAMILY Cytochrome P450 5 225 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS P450 superfamily signature 174 185 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS P450 superfamily signature 165 174 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS P450 superfamily signature 33 50 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2877 233 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2877 Lac-Chr10:43301779 Lac4g2600 Lac-Chr4:45092971 4.30E-47 dispersed
Lac10g2877 Lac-Chr10:43301779 Lac10g1894 Lac-Chr10:24549545 4.40E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2877 K20624 - csv:101207686 400.593