Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2908 ATGAAAATGGATGATCAATATGCTCTCTCCGATCTCCGCCACCTCATGACTGCTCCTCCTCGTTCCCATTTCCCTTCTTCCTCAATTCCCCACCATGATCTCTTCTCCTCTTCCTCCTCCGCTTCGGCTTCGGCCTCGGCAGCCTTTCGCCACCACCATAGTCCCTACGATCTCATTATGATGATGCCACGTGACCCTCTTCCCGATTTTCGCTCCGATTCCGCCGCCTCGCCCCCTGCCGTCGTCGCCTCCGCTCCCCCCACCGGCTTCGAAGTCGAAACCACCTCGCTCGCTGCCGACTCCGCCACCGCCCGATGGCCTCGCCAGGAAACCCTCACTCTCTTGGACATCAGATCTCGCCTTGATTCTAAGTTCAGAGAAGCTAACCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGAATCATGGCTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAGACAAAGGAAGGCAAAGCTGGAAGACAAGATGGCAAGAACTACAGATTCTTCAGGCAGCTGGAAGCTCTCTATGGTGAAACCAGCAATGCCACTTCACTTCCAGATTCCCATTATGTTGGAGACAGCAACCTCAGATTCCAACAAAACGGGACCAACAATCCCATGAGCCACGAACCTCAGCAGAAGCACTACTGCGACAGCCTCAGCCTCTCCAACACGTCGGACTTCGAAACCTCGGCCTCGTCTGACGGTAACGACGACCTCGGCTCGGTCGGCGTAATGGACAACGATTCGACGGAGAAGAGGAGGAAGAAGCGAGGCGGGAAATGCTGGAAGGCGAAGATCAAGCAATTCATCGACTCGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAGAAGGAGAGAATGGTTCGTGAGGAGGAATGGAGAAGACAAGAAGTGTCAAGAATTGACAGAGAGAGAAGCTTTTGGGCGAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCATTAATGGAGGCATTGCAGAAGCTAACAGGACGAGAATCGAGAGAGTACAACTCCTCGCCCGACCACGGATTAACCGCGGTCGAGCATCATCGAAACAATAGCGAAAACCAAAACGAAGACGGGAGCGAGATACTAAACAACAGCACAGCTAGAGAACTAGTAGACAACAACAATTACCAAAGAAAAATAGTAATGGATCAAGGCAACAAGAAACGCAAGGAGAATTCAAGATCAGCCACCACCCCAACAACAACCTACAATCTTTACTTCCAAACAGACTCCTCCCTCTACAGCGGCGGCGGAGCCTACGGCGGTGGCGCCGAGATTAAAGAACAAAGCCCAAACAGTTCGAATGCGGGCGGCGGTGGCGGTGGCGGCGGCCATGTGGTGCAAGATAGCTGCTTTCGTTTCTTGATGGGTGAAGGAGATCAGTCTCAATCTGGTTTATGGGAAAATTTTGGGCTGAAACTCAACAATGGAAGTGATCAAACTTGA 1548 50.13 MKMDDQYALSDLRHLMTAPPRSHFPSSSIPHHDLFSSSSSASASASAAFRHHHSPYDLIMMMPRDPLPDFRSDSAASPPAVVASAPPTGFEVETTSLAADSATARWPRQETLTLLDIRSRLDSKFREANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHYVGDSNLRFQQNGTNNPMSHEPQQKHYCDSLSLSNTSDFETSASSDGNDDLGSVGVMDNDSTEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMVREEEWRRQEVSRIDRERSFWAKERAWIEARDAALMEALQKLTGRESREYNSSPDHGLTAVEHHRNNSENQNEDGSEILNNSTARELVDNNNYQRKIVMDQGNKKRKENSRSATTPTTTYNLYFQTDSSLYSGGGAYGGGAEIKEQSPNSSNAGGGGGGGGHVVQDSCFRFLMGEGDQSQSGLWENFGLKLNNGSDQT 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43682996 43685599 + Lag0026953.1 Lac10g2908 585439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2908 515 Pfam Myb/SANT-like DNA-binding domain 105 191 IPR044822 -
Lac10g2908 515 MobiDBLite consensus disorder prediction 401 415 - -
Lac10g2908 515 MobiDBLite consensus disorder prediction 401 436 - -
Lac10g2908 515 Gene3D - 106 168 - -
Lac10g2908 515 FunFam trihelix transcription factor PTL-like 106 168 - -
Lac10g2908 515 CDD GT1 105 170 - -
Lac10g2908 515 Coils Coil 295 322 - -
Lac10g2908 515 ProSiteProfiles Myb-like domain profile. 98 163 IPR001005 -
Lac10g2908 515 MobiDBLite consensus disorder prediction 458 478 - -
Lac10g2908 515 PANTHER FI21293P1 86 388 - -
Lac10g2908 515 MobiDBLite consensus disorder prediction 243 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2908 Lac-Chr10:43682996 Lac13g0637 Lac-Chr13:4732206 2.40E-58 dispersed
Lac10g2908 Lac-Chr10:43682996 Lac11g1813 Lac-Chr11:32745947 4.30E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22837 PF13837 Myb_DNA-bind_4 1.40E-19 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2908 - - - 0.0