Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2918 ATGACCATTTCAAGGGGGATACTTTGTCGGTTGCAGAACTCCAAGCTGAACTTGACTTGCATGGCTCCCTGGCCTGATCGTGGATTGAGTCTTGAGGTCTGTCAGAAGCCAATCTTGTTTGGTAAGACAGAATTTGACAAAGAAAAGAGAGTGCTCGACCAGAACAACGGCCAACAAAGACCAGAAGGGTTGGAGGAAGATGAAGATTTCTTCGCCTTCCGTGCTCAGAGAGACCATGAAATTTCTAAATTTGTTGAGTTTTCTGACAGTGAACAGAGAATTGCATTAAGAAAAGAAGCTGTATCAACCAATCGAATGGATTCCGGCGAACCCGAGGGAAATAATAAGGGCCATGTTGAAGTTGAAGGCGGTTCTTGGATTCCGGTGACACCCATGAAGCCCATTCTACCGAGACCGCCGCTGATCTATGCGAGGATGGACCGGAATCAGTCACGGCCACACTGGTTGGGATCAGAGAGACTTTCAGCTGAGACAAGCAGTGGAGCTAATGGTTCTTACGACTGGGGAGCAGCTCAGAGTGGGCAATTGCAAGTGGCGACACATTCCATTGATGCATTAGTGGGCATTCCTTTTTTGCAGCTAATGGCACTGGCAGATGCGGCTTCTATTGTGGGTGGAAATGCAAGCGATCAAATTGAATTGGAGTCTAGCTCTATGAAGGGTCGTCTCGGTGGCAGTTGCATAACTGAAGCTACAGAGTATGAAATATCTGACCATTGCCAGCATGCTTATGACCTCAATATTGTGCAACCCAGATTTCGAGCAAGTGACAGAGATTCGGGGAGCAGTGATTCTGGTCGAGGGGGGTATCAGCCTCAGGAGCTTGTCAGCCAGTACAGGACAGCCCTTGCTGAGTTGAATTTCAATTCGAAACCAATAATCATGAATTTGACCATAATCGCAGGTGAAAATCTCCAGGCTGCAAAAGCAATCTCTGCCACCGTTTGTGACAACATTCTTGAGGTTTCCAGTGAGCAGAAGCTTCCATCACTTCATCTGTTGGACAGTATTGTAAAGAATATCGGAAGAGATTACATAAAATACTTTGCAGAAAGACTGCCCGAGGTATTTTGCAAAGCTTATAGGCAAGTTGACCCTTCTGTACATCCAAGTATGAGACATCTCTTTGGCACCTGGATAGGAGTGTTTCCTCCTCAAACTCTGCAGATTATCGAGAAAGAACTCGGCTTCATGCCCAACGATAGTTCGTCTTCTGGGACCATAACCTCAATGCCAGACTTGCAGGCACAATGTCCAAACCATAGTATCCATGTAAATCTCAATTATATAGAGAGGCAACAACTTCAGCAGTCAGGCAAGGTGAAAGGAATGACTAGTGAAGCTACTGGGGTAGCAACAAATGTAACTCAGGATGTTGCCCAAGCCAAAATCAGTATTGGACGTCCATGGGCAGATACTCCCATTAAAGTGCTTGACATTCAACATCCACTTAGAGATGCACCAAATGATATAGCACAAGAGAAGAACATCACGGCTGCACATACAGACTATGAATATGGTTCTGATCTTCCAAGGACAACAGGTATCGAAATAAGGGTTGTTGATGAAGGGCAAGACAAACCTTGGTCTTCAGTGGGAACCGATTTAGCAGAGAATGCTGGAAACCTGAATAAAACACCACCACCCAGACAGAGGAGGAGAAAACATAGACCTAAGGTCATAATTGAAGGGAAAACTAAAGGAACAAAACCAAACTTGAAGACCCCTAGTGCCAGTCCAAGTATGAGAAAGCGTGGCAGGAAAAGTGGACTCAGCAAGTCTTCAGCTACTCCCCCAATAGAAGTTACAGGTGAAACCTCAGACCAAGAAATGCTCAAGCATAGAAGGAAGTCGTGCAGAAGGGCCATAAATTTTGATTCTCAGGCCCAAACAGGAGACGGATCCTTCAATACAAGGCCACTGGAACAAGAATCACTCATCCAAAACATTCAATCAACTACAGGACTAGAGGAAGTGAGACTTGAAGAAGTAGGCTCTTCCACTGATCCAATTTGGTCCATGAATCAAATGCTGAAAAGCTACGAGTCTCTGCCAGAAAAACAAGCTCCACCAGCTGAAATTTCAGTTGAACATAATTCTCCTGAGAAAGGACTGCCTTCAAACAACCAAATGGAGTACAATACAGAACAAAATGATAAAGCAATTTCCAATTCTGAAGAAGGAAACATGGTAGAAATCATGATCAATGATGATAATCAATCGTTACTAGGAAGTTCAAATGGTCTTATCTTCTGCAAGAACTCCACTTTGACTCCAAGAAAGCAGGAAACTTGTTGCCTGAAAAAACGTTCTCAGGCCATCAAACAAGCAGATACTAGGAGCGTAAATTTAACTGGGGTCCATTATAATACATTATCTGCATATCAGTCGATGTCCTGGATGCATTTTCCCCACATTTGCAAGAAAAAAAGAACTGAGAAGGGGCAGAATCCTGTCTCCTCTAGTGCAATTACTAGTGCAACTGCAGCCACACATTTATTGAGGCCGGAAAGTGCATGCTCTTTCAATGATCCCCAGAGAAATCACACGCTATCAAAATCCAACACCTGGATAGCTGGACCTCAGTTTAATACTTGTAGAAGTAAAACTGCAGCTGGGCATGGAGGAAACGACCATCAGGATAAGTTGCAAACATACGGAGGTATCATGGCTTTAGGTCAGACTGAGAGAACAAAAAAGAGATCCAGAACAACCAAACGAGTTTCTGACATGGCTCCACCAGCAAGAATTGGTGATTGTGAGAAGCAGCCAATGTATCCTACTAATCAACCTCCCTTGAGCAGTTCTGCAAAAAATATCATTACGTCTCAAACATGCATAAATGGACTATTCGAAACAATGAATGCAACAGTGGCAAAGAAGAAAAGAACCAAGAAGAATTTTCCTTCAAGTTCAACTCTTCTCAATATAAAGAAAGATCTTCAGGACCGCAGATTTGTATCCTTCAATCCATACCAATTCTTTCCCAACACATCAGGCACTGCTTCAGAACATGGGAATCAAATGTGCTTTATTGATGCCATAGTGGAACAATTAAAGCATCTAGACATCAACAAAGAAAGCGACAATTTGGGATATAGAGAGCGAGCACTTGTACCCTATAACGTACAAAATCAGGAGCAGAATGCCATTGTCATTTATGGAAGAGATGGAACTATTGTACCATTTAATCCTATAAAAAAACGACGGCCTCGGCCCAAAGTCGAGCTCGATGAAGAGACTGGTAGAGTATGGAAGCTTCTGATGGGAAATATAAACAGCGAAGGCATTGATGGAACAGATGAAGAAAAGATCAAATGGTGGGAAGAAGAGAGGAAGGTGTTTCGAGGGCGAGCAGATTCATTTATCGCACGGATGCATCTTGTTCAAGGTGATAGGCGTTTCTCTCAATGGAAGGGATCAGTTGTGGACTCTGTGGTTGGAGTATTCCTTACTCAGAATGTCTCAGATCACCTTTCTAGCTCTGCCTTCATGTCTCTTGCTGCACGCTTTCCTCCTAAGCCAAAGTGTCACGAAGCATCATGCTATCAAGAGCCAATTATAGATTTGGATGAACCCGAAGAATGCATGTTGAATTTAGAGGATGGCACGAAATTGAACAAACAAATAATGCAACAACAAATAAGTGAAGAGGGCTCCTTGATGAAAAATGAAGTGGAAAAAAGTGAAGGACGAATAGTTGTTGACAACAATGAATCTTCTGGAAGTAATGTCGATGATGGGAGCTCAAACAAGGAACCAGAAAAGAAAATCTTTAGTTCATCTCATAACATTGTTGAGGCATGTAGCAATTCTTTGGGAGAAATATCATTGACTGGAACCAGCCCAATGCAGGAATGTTTCTCCGCAGAGAAAGAAATATATGATTCGTTTTCATTTCAAGACTGTCTGGATTCATCAATTTCTCAAACCAGTGAGAGCATTGAACCATCCTCGGAAGGCAATTCAGAAGATCTACCAAGCTGGTCCAAAGAGGCACACATAGACTCTTCATCAGAGGAGCTTATTCAGATGGCTGGACTAAATACTCTAAATGCTCATGTTACTATTGATAGTTTTGTTGACCAGTCAGAAAACACCACAGACAACAAACTAGTAGGAAAGAAATGTGACAATGGAATAGATGACGCTTTCCAACCAGATGATCATGAAATATCCATAAAAGATTATGCCAGTCATTTGAGTGGCTGTCAAATGCAGCAAAACCACACCTCAGAATCATTGGAGGTTGACTACTCTCAGACGTGCAATGGAGTTCAAACTTCCAACGAGTGCCAGAACAAGGATGAAAATTTTCATACTGAACAAAGTACCCTGTCTGTAGAATCTGACAATCATGCTAACGTTGAAATGGAGCTCATAGTAGATATTCACGAAGCACCATTATCTAGTAGTGAATTAAGCATCAACGCAAAGGAGCCAAGTTTGACCTTACAGTCTCAAGGCAGTGTGATTGAGGACCCTCAAAATGTTGAGTCGCCAGCAGAATGCACAAATAATGTGCATGAAATTCAACCAAAAATTTCACCAAATGCTACAGGAATAACAACGCAGTCAAATCCAAAGGAGTATGACTATTTACTTAGTAATGAGTTTAAAGAGATTAAACCTGCTACTTCAAGATCTCAGAGAAAACAAATTGCAAAGGAAAAAGAAGGTAACCGCAATTGGGACGACTTAAGAAAACAGGCAGAAGCCAATGGAAGGAAACGACAGAGAACTGAAAATACAATGGACTCGTTGGATTGGGAAGCTGTAAGATGTGCTGATGTGAATGAAATTGCACACACCATCAGAGAACGGGGCATGAACAACATGCTTGCTGAACGAATCAAGGATTTTCTAAACCGATTGGTGAAAGATCATGGGAGCACTGATCTCGAATGGTTAAGGGATGTTGCACCAGACCAAGCAAAAGAATATTTACTAAGTGTAAGAGGATTGGGACTAAAAAGCGTGGAGTGTGTGCGACTTCTTACTCTTCATCACCTTGCATTCCCAGTTGACACAAATGTTGGACGTATAGCCGTACGACTGGGATGGGTACCCCTTCAACCACTACCAGAATCCCTACAGTTGCATCTTCTAGAATTGTACCCTGTGCTGGAGTCAATCCAGAAGTATCTCTGGCCTCGGCTTTGCAAGCTTGACCAAAGAACACTGTATGAGCTGCACTACCAAATGATTACGTTTGGAAAGGTCTTTTGTACAAAAAGCAAACCAAATTGTAATGCTTGTCCAATGAGAGGAGAATGTAGACACTTTGCTAGCGCATTTGCAAGTGCAAGACTCGGCCTTCCAGCACCAGAAGATAAAAGAATAGTTACTACTACTGAAAGCAGAGAAGCTGACAATAACCAAGCCAGAACAATTGACCAACCAATGCTGTCCCTCCCTCCCTCAACAATATCATCTGAAGAAATCAAGCCATCAGAATTAAGCCATCATTCTGATGAGAAAACTACATTTGGTACATGCGTACCCATTATTGAAGAACCAGCAACACCAGAGCAAGAAAGCACCACACAAGCTGCACTCAGCGACATTGAGGATGCCTTCCACGAAGACCCGGATGAAATTCCTGTAATAAAACTAGACATTGAGGAGTTCTCACTGAATTTACAGAACTACGTTCAAAAGAACATGGAACTTCAAGAGGGTGACATGTCAAAAGCCTTAATTGCACTAACCCCAGAAGCTGCATCAATTCCCATGCCCAAACTTAAGAATGTCAGCCGGCTGCGTACAGAGCACCAAGTCTATGAACTTCCAGATAATCACCCTCTTCTTGAAAAGTTGAAGTTGGATAGAAGGGAACCAGATGATCCTTGCTCATACCTTTTGGCTATATGGACACCAGGTGAAACAGCAAATTCCATCCAACTACCCGAAAAAAAGTGCAGTAATCAAGAACACCATCAATTGTGTCATGAGGAGGAGTGCTTCTCGTGCAACAGTGTCAGAGAAGCCAACTCCCTCATGGTTCGAGGGACTCTTTTGATACCATGTCGAACAGCAATGAGAGGAAGCTTTCCACTGAACGGTACCTATTTTCAAGTCAATGAGGTGTTTGCAGATCACGACTCAAGCCTCAACCCGATTGATGTTCCTAGGAACTGGTTATGGAATCTTCCTAGGCGTACTGTATATTTTGGGACCTCCATACCAACGATATTTAAAGGTTTGACTACACAAGGCATCCAACACTGTTTCTGGAGAGGATTCGTCTGTGTAAGAGGTTTTGACCAAAAATCAAGGGCACCCCGACCTTTGATGGCCAGGCTTCATTTTCCAGCCAGCAAATTGAACAGGGGAAGAGATGATTGCTTAGAGATAAATATCAGCATAGAGATGCAGAAACAAGTGTTGAACTCAGCGGCCAAGTCTACTCTCTCTTCTGGTGCTCCATGGGCTTCTGGGGTGGGATTGGTGCCCACTGCAATATCAGATAGAGGACTGGAGCTGCTATCAGCAACCTTTTGGTTTAGTGTCCTGGTATGTGAACATCTGAACTATTTCCTCTGGCCTATCAGAGGATTTCAATTGGAGATTCTGTCTGGTAACTTTCTAGGTGAGTTATTGGGAAGATCTGCTAAAATGGCCATCGATAAGCATGTTTCTATGGCCCCAAATCCTGAACCATCATGCAAGAATTTGATGATTATTCGATTTCCATCAGTAAAACATAATAGCAGTATCATGATTCTTGTGCTTAGAGTATGTGTAATGTCATTGGTTCTGGGTTTGCTTGGATGA 6798 42.81 MTISRGILCRLQNSKLNLTCMAPWPDRGLSLEVCQKPILFGKTEFDKEKRVLDQNNGQQRPEGLEEDEDFFAFRAQRDHEISKFVEFSDSEQRIALRKEAVSTNRMDSGEPEGNNKGHVEVEGGSWIPVTPMKPILPRPPLIYARMDRNQSRPHWLGSERLSAETSSGANGSYDWGAAQSGQLQVATHSIDALVGIPFLQLMALADAASIVGGNASDQIELESSSMKGRLGGSCITEATEYEISDHCQHAYDLNIVQPRFRASDRDSGSSDSGRGGYQPQELVSQYRTALAELNFNSKPIIMNLTIIAGENLQAAKAISATVCDNILEVSSEQKLPSLHLLDSIVKNIGRDYIKYFAERLPEVFCKAYRQVDPSVHPSMRHLFGTWIGVFPPQTLQIIEKELGFMPNDSSSSGTITSMPDLQAQCPNHSIHVNLNYIERQQLQQSGKVKGMTSEATGVATNVTQDVAQAKISIGRPWADTPIKVLDIQHPLRDAPNDIAQEKNITAAHTDYEYGSDLPRTTGIEIRVVDEGQDKPWSSVGTDLAENAGNLNKTPPPRQRRRKHRPKVIIEGKTKGTKPNLKTPSASPSMRKRGRKSGLSKSSATPPIEVTGETSDQEMLKHRRKSCRRAINFDSQAQTGDGSFNTRPLEQESLIQNIQSTTGLEEVRLEEVGSSTDPIWSMNQMLKSYESLPEKQAPPAEISVEHNSPEKGLPSNNQMEYNTEQNDKAISNSEEGNMVEIMINDDNQSLLGSSNGLIFCKNSTLTPRKQETCCLKKRSQAIKQADTRSVNLTGVHYNTLSAYQSMSWMHFPHICKKKRTEKGQNPVSSSAITSATAATHLLRPESACSFNDPQRNHTLSKSNTWIAGPQFNTCRSKTAAGHGGNDHQDKLQTYGGIMALGQTERTKKRSRTTKRVSDMAPPARIGDCEKQPMYPTNQPPLSSSAKNIITSQTCINGLFETMNATVAKKKRTKKNFPSSSTLLNIKKDLQDRRFVSFNPYQFFPNTSGTASEHGNQMCFIDAIVEQLKHLDINKESDNLGYRERALVPYNVQNQEQNAIVIYGRDGTIVPFNPIKKRRPRPKVELDEETGRVWKLLMGNINSEGIDGTDEEKIKWWEEERKVFRGRADSFIARMHLVQGDRRFSQWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPPKPKCHEASCYQEPIIDLDEPEECMLNLEDGTKLNKQIMQQQISEEGSLMKNEVEKSEGRIVVDNNESSGSNVDDGSSNKEPEKKIFSSSHNIVEACSNSLGEISLTGTSPMQECFSAEKEIYDSFSFQDCLDSSISQTSESIEPSSEGNSEDLPSWSKEAHIDSSSEELIQMAGLNTLNAHVTIDSFVDQSENTTDNKLVGKKCDNGIDDAFQPDDHEISIKDYASHLSGCQMQQNHTSESLEVDYSQTCNGVQTSNECQNKDENFHTEQSTLSVESDNHANVEMELIVDIHEAPLSSSELSINAKEPSLTLQSQGSVIEDPQNVESPAECTNNVHEIQPKISPNATGITTQSNPKEYDYLLSNEFKEIKPATSRSQRKQIAKEKEGNRNWDDLRKQAEANGRKRQRTENTMDSLDWEAVRCADVNEIAHTIRERGMNNMLAERIKDFLNRLVKDHGSTDLEWLRDVAPDQAKEYLLSVRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLGLPAPEDKRIVTTTESREADNNQARTIDQPMLSLPPSTISSEEIKPSELSHHSDEKTTFGTCVPIIEEPATPEQESTTQAALSDIEDAFHEDPDEIPVIKLDIEEFSLNLQNYVQKNMELQEGDMSKALIALTPEAASIPMPKLKNVSRLRTEHQVYELPDNHPLLEKLKLDRREPDDPCSYLLAIWTPGETANSIQLPEKKCSNQEHHQLCHEEECFSCNSVREANSLMVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIDVPRNWLWNLPRRTVYFGTSIPTIFKGLTTQGIQHCFWRGFVCVRGFDQKSRAPRPLMARLHFPASKLNRGRDDCLEINISIEMQKQVLNSAAKSTLSSGAPWASGVGLVPTAISDRGLELLSATFWFSVLVCEHLNYFLWPIRGFQLEILSGNFLGELLGRSAKMAIDKHVSMAPNPEPSCKNLMIIRFPSVKHNSSIMILVLRVCVMSLVLGLLG 2265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43784285 43803081 - Lag0026963.1 Lac10g2918 585449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2918 2265 ProSiteProfiles CID domain profile. 278 406 IPR006569 -
Lac10g2918 2265 Pfam RRM in Demeter 2011 2111 IPR028925 -
Lac10g2918 2265 MobiDBLite consensus disorder prediction 902 932 - -
Lac10g2918 2265 Gene3D - 1665 1777 IPR023170 -
Lac10g2918 2265 CDD CID_Pcf11 283 395 IPR047415 -
Lac10g2918 2265 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 534 2120 IPR044811 GO:0019104(InterPro)|GO:0035514(InterPro)|GO:0141166(InterPro)
Lac10g2918 2265 MobiDBLite consensus disorder prediction 1316 1333 - -
Lac10g2918 2265 MobiDBLite consensus disorder prediction 1794 1822 - -
Lac10g2918 2265 Pfam CID domain 287 395 IPR006569 -
Lac10g2918 2265 Gene3D - 274 403 IPR008942 -
Lac10g2918 2265 CDD ENDO3c 1596 1714 IPR003265 GO:0006284(InterPro)
Lac10g2918 2265 SMART 558neu5 281 403 IPR006569 -
Lac10g2918 2265 SMART ccc3 1749 1769 IPR003651 GO:0051539(InterPro)
Lac10g2918 2265 MobiDBLite consensus disorder prediction 1551 1574 - -
Lac10g2918 2265 MobiDBLite consensus disorder prediction 692 718 - -
Lac10g2918 2265 SUPERFAMILY DNA-glycosylase 1124 1771 IPR011257 GO:0003824(InterPro)|GO:0006281(InterPro)
Lac10g2918 2265 MobiDBLite consensus disorder prediction 1224 1264 - -
Lac10g2918 2265 SMART endo3end 1586 1748 IPR003265 GO:0006284(InterPro)
Lac10g2918 2265 MobiDBLite consensus disorder prediction 1316 1345 - -
Lac10g2918 2265 MobiDBLite consensus disorder prediction 532 618 - -
Lac10g2918 2265 MobiDBLite consensus disorder prediction 1792 1833 - -
Lac10g2918 2265 FunFam polyadenylation and cleavage factor homolog 4 276 403 - -
Lac10g2918 2265 FunFam DNA glycosylase/AP lyase ROS1 1670 1778 - -
Lac10g2918 2265 SUPERFAMILY ENTH/VHS domain 279 402 IPR008942 -
Lac10g2918 2265 Pfam Permuted single zf-CXXC unit 1977 2006 IPR028924 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2918 Lac-Chr10:43784285 Lac9g2674 Lac-Chr9:45083654 1.40E-203 dispersed
Lac10g2914 Lac-Chr10:43740027 Lac10g2918 Lac-Chr10:43784285 9.80E-145 proximal
Lac10g0707 Lac-Chr10:5446038 Lac10g2918 Lac-Chr10:43784285 1.40E-41 transposed
Lac13g0639 Lac-Chr13:4762154 Lac10g2918 Lac-Chr10:43784285 1.90E-275 transposed
Lac1g2240 Lac-Chr1:43794648 Lac10g2918 Lac-Chr10:43784285 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2918 - - - 0.0