Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g2918 | ATGACCATTTCAAGGGGGATACTTTGTCGGTTGCAGAACTCCAAGCTGAACTTGACTTGCATGGCTCCCTGGCCTGATCGTGGATTGAGTCTTGAGGTCTGTCAGAAGCCAATCTTGTTTGGTAAGACAGAATTTGACAAAGAAAAGAGAGTGCTCGACCAGAACAACGGCCAACAAAGACCAGAAGGGTTGGAGGAAGATGAAGATTTCTTCGCCTTCCGTGCTCAGAGAGACCATGAAATTTCTAAATTTGTTGAGTTTTCTGACAGTGAACAGAGAATTGCATTAAGAAAAGAAGCTGTATCAACCAATCGAATGGATTCCGGCGAACCCGAGGGAAATAATAAGGGCCATGTTGAAGTTGAAGGCGGTTCTTGGATTCCGGTGACACCCATGAAGCCCATTCTACCGAGACCGCCGCTGATCTATGCGAGGATGGACCGGAATCAGTCACGGCCACACTGGTTGGGATCAGAGAGACTTTCAGCTGAGACAAGCAGTGGAGCTAATGGTTCTTACGACTGGGGAGCAGCTCAGAGTGGGCAATTGCAAGTGGCGACACATTCCATTGATGCATTAGTGGGCATTCCTTTTTTGCAGCTAATGGCACTGGCAGATGCGGCTTCTATTGTGGGTGGAAATGCAAGCGATCAAATTGAATTGGAGTCTAGCTCTATGAAGGGTCGTCTCGGTGGCAGTTGCATAACTGAAGCTACAGAGTATGAAATATCTGACCATTGCCAGCATGCTTATGACCTCAATATTGTGCAACCCAGATTTCGAGCAAGTGACAGAGATTCGGGGAGCAGTGATTCTGGTCGAGGGGGGTATCAGCCTCAGGAGCTTGTCAGCCAGTACAGGACAGCCCTTGCTGAGTTGAATTTCAATTCGAAACCAATAATCATGAATTTGACCATAATCGCAGGTGAAAATCTCCAGGCTGCAAAAGCAATCTCTGCCACCGTTTGTGACAACATTCTTGAGGTTTCCAGTGAGCAGAAGCTTCCATCACTTCATCTGTTGGACAGTATTGTAAAGAATATCGGAAGAGATTACATAAAATACTTTGCAGAAAGACTGCCCGAGGTATTTTGCAAAGCTTATAGGCAAGTTGACCCTTCTGTACATCCAAGTATGAGACATCTCTTTGGCACCTGGATAGGAGTGTTTCCTCCTCAAACTCTGCAGATTATCGAGAAAGAACTCGGCTTCATGCCCAACGATAGTTCGTCTTCTGGGACCATAACCTCAATGCCAGACTTGCAGGCACAATGTCCAAACCATAGTATCCATGTAAATCTCAATTATATAGAGAGGCAACAACTTCAGCAGTCAGGCAAGGTGAAAGGAATGACTAGTGAAGCTACTGGGGTAGCAACAAATGTAACTCAGGATGTTGCCCAAGCCAAAATCAGTATTGGACGTCCATGGGCAGATACTCCCATTAAAGTGCTTGACATTCAACATCCACTTAGAGATGCACCAAATGATATAGCACAAGAGAAGAACATCACGGCTGCACATACAGACTATGAATATGGTTCTGATCTTCCAAGGACAACAGGTATCGAAATAAGGGTTGTTGATGAAGGGCAAGACAAACCTTGGTCTTCAGTGGGAACCGATTTAGCAGAGAATGCTGGAAACCTGAATAAAACACCACCACCCAGACAGAGGAGGAGAAAACATAGACCTAAGGTCATAATTGAAGGGAAAACTAAAGGAACAAAACCAAACTTGAAGACCCCTAGTGCCAGTCCAAGTATGAGAAAGCGTGGCAGGAAAAGTGGACTCAGCAAGTCTTCAGCTACTCCCCCAATAGAAGTTACAGGTGAAACCTCAGACCAAGAAATGCTCAAGCATAGAAGGAAGTCGTGCAGAAGGGCCATAAATTTTGATTCTCAGGCCCAAACAGGAGACGGATCCTTCAATACAAGGCCACTGGAACAAGAATCACTCATCCAAAACATTCAATCAACTACAGGACTAGAGGAAGTGAGACTTGAAGAAGTAGGCTCTTCCACTGATCCAATTTGGTCCATGAATCAAATGCTGAAAAGCTACGAGTCTCTGCCAGAAAAACAAGCTCCACCAGCTGAAATTTCAGTTGAACATAATTCTCCTGAGAAAGGACTGCCTTCAAACAACCAAATGGAGTACAATACAGAACAAAATGATAAAGCAATTTCCAATTCTGAAGAAGGAAACATGGTAGAAATCATGATCAATGATGATAATCAATCGTTACTAGGAAGTTCAAATGGTCTTATCTTCTGCAAGAACTCCACTTTGACTCCAAGAAAGCAGGAAACTTGTTGCCTGAAAAAACGTTCTCAGGCCATCAAACAAGCAGATACTAGGAGCGTAAATTTAACTGGGGTCCATTATAATACATTATCTGCATATCAGTCGATGTCCTGGATGCATTTTCCCCACATTTGCAAGAAAAAAAGAACTGAGAAGGGGCAGAATCCTGTCTCCTCTAGTGCAATTACTAGTGCAACTGCAGCCACACATTTATTGAGGCCGGAAAGTGCATGCTCTTTCAATGATCCCCAGAGAAATCACACGCTATCAAAATCCAACACCTGGATAGCTGGACCTCAGTTTAATACTTGTAGAAGTAAAACTGCAGCTGGGCATGGAGGAAACGACCATCAGGATAAGTTGCAAACATACGGAGGTATCATGGCTTTAGGTCAGACTGAGAGAACAAAAAAGAGATCCAGAACAACCAAACGAGTTTCTGACATGGCTCCACCAGCAAGAATTGGTGATTGTGAGAAGCAGCCAATGTATCCTACTAATCAACCTCCCTTGAGCAGTTCTGCAAAAAATATCATTACGTCTCAAACATGCATAAATGGACTATTCGAAACAATGAATGCAACAGTGGCAAAGAAGAAAAGAACCAAGAAGAATTTTCCTTCAAGTTCAACTCTTCTCAATATAAAGAAAGATCTTCAGGACCGCAGATTTGTATCCTTCAATCCATACCAATTCTTTCCCAACACATCAGGCACTGCTTCAGAACATGGGAATCAAATGTGCTTTATTGATGCCATAGTGGAACAATTAAAGCATCTAGACATCAACAAAGAAAGCGACAATTTGGGATATAGAGAGCGAGCACTTGTACCCTATAACGTACAAAATCAGGAGCAGAATGCCATTGTCATTTATGGAAGAGATGGAACTATTGTACCATTTAATCCTATAAAAAAACGACGGCCTCGGCCCAAAGTCGAGCTCGATGAAGAGACTGGTAGAGTATGGAAGCTTCTGATGGGAAATATAAACAGCGAAGGCATTGATGGAACAGATGAAGAAAAGATCAAATGGTGGGAAGAAGAGAGGAAGGTGTTTCGAGGGCGAGCAGATTCATTTATCGCACGGATGCATCTTGTTCAAGGTGATAGGCGTTTCTCTCAATGGAAGGGATCAGTTGTGGACTCTGTGGTTGGAGTATTCCTTACTCAGAATGTCTCAGATCACCTTTCTAGCTCTGCCTTCATGTCTCTTGCTGCACGCTTTCCTCCTAAGCCAAAGTGTCACGAAGCATCATGCTATCAAGAGCCAATTATAGATTTGGATGAACCCGAAGAATGCATGTTGAATTTAGAGGATGGCACGAAATTGAACAAACAAATAATGCAACAACAAATAAGTGAAGAGGGCTCCTTGATGAAAAATGAAGTGGAAAAAAGTGAAGGACGAATAGTTGTTGACAACAATGAATCTTCTGGAAGTAATGTCGATGATGGGAGCTCAAACAAGGAACCAGAAAAGAAAATCTTTAGTTCATCTCATAACATTGTTGAGGCATGTAGCAATTCTTTGGGAGAAATATCATTGACTGGAACCAGCCCAATGCAGGAATGTTTCTCCGCAGAGAAAGAAATATATGATTCGTTTTCATTTCAAGACTGTCTGGATTCATCAATTTCTCAAACCAGTGAGAGCATTGAACCATCCTCGGAAGGCAATTCAGAAGATCTACCAAGCTGGTCCAAAGAGGCACACATAGACTCTTCATCAGAGGAGCTTATTCAGATGGCTGGACTAAATACTCTAAATGCTCATGTTACTATTGATAGTTTTGTTGACCAGTCAGAAAACACCACAGACAACAAACTAGTAGGAAAGAAATGTGACAATGGAATAGATGACGCTTTCCAACCAGATGATCATGAAATATCCATAAAAGATTATGCCAGTCATTTGAGTGGCTGTCAAATGCAGCAAAACCACACCTCAGAATCATTGGAGGTTGACTACTCTCAGACGTGCAATGGAGTTCAAACTTCCAACGAGTGCCAGAACAAGGATGAAAATTTTCATACTGAACAAAGTACCCTGTCTGTAGAATCTGACAATCATGCTAACGTTGAAATGGAGCTCATAGTAGATATTCACGAAGCACCATTATCTAGTAGTGAATTAAGCATCAACGCAAAGGAGCCAAGTTTGACCTTACAGTCTCAAGGCAGTGTGATTGAGGACCCTCAAAATGTTGAGTCGCCAGCAGAATGCACAAATAATGTGCATGAAATTCAACCAAAAATTTCACCAAATGCTACAGGAATAACAACGCAGTCAAATCCAAAGGAGTATGACTATTTACTTAGTAATGAGTTTAAAGAGATTAAACCTGCTACTTCAAGATCTCAGAGAAAACAAATTGCAAAGGAAAAAGAAGGTAACCGCAATTGGGACGACTTAAGAAAACAGGCAGAAGCCAATGGAAGGAAACGACAGAGAACTGAAAATACAATGGACTCGTTGGATTGGGAAGCTGTAAGATGTGCTGATGTGAATGAAATTGCACACACCATCAGAGAACGGGGCATGAACAACATGCTTGCTGAACGAATCAAGGATTTTCTAAACCGATTGGTGAAAGATCATGGGAGCACTGATCTCGAATGGTTAAGGGATGTTGCACCAGACCAAGCAAAAGAATATTTACTAAGTGTAAGAGGATTGGGACTAAAAAGCGTGGAGTGTGTGCGACTTCTTACTCTTCATCACCTTGCATTCCCAGTTGACACAAATGTTGGACGTATAGCCGTACGACTGGGATGGGTACCCCTTCAACCACTACCAGAATCCCTACAGTTGCATCTTCTAGAATTGTACCCTGTGCTGGAGTCAATCCAGAAGTATCTCTGGCCTCGGCTTTGCAAGCTTGACCAAAGAACACTGTATGAGCTGCACTACCAAATGATTACGTTTGGAAAGGTCTTTTGTACAAAAAGCAAACCAAATTGTAATGCTTGTCCAATGAGAGGAGAATGTAGACACTTTGCTAGCGCATTTGCAAGTGCAAGACTCGGCCTTCCAGCACCAGAAGATAAAAGAATAGTTACTACTACTGAAAGCAGAGAAGCTGACAATAACCAAGCCAGAACAATTGACCAACCAATGCTGTCCCTCCCTCCCTCAACAATATCATCTGAAGAAATCAAGCCATCAGAATTAAGCCATCATTCTGATGAGAAAACTACATTTGGTACATGCGTACCCATTATTGAAGAACCAGCAACACCAGAGCAAGAAAGCACCACACAAGCTGCACTCAGCGACATTGAGGATGCCTTCCACGAAGACCCGGATGAAATTCCTGTAATAAAACTAGACATTGAGGAGTTCTCACTGAATTTACAGAACTACGTTCAAAAGAACATGGAACTTCAAGAGGGTGACATGTCAAAAGCCTTAATTGCACTAACCCCAGAAGCTGCATCAATTCCCATGCCCAAACTTAAGAATGTCAGCCGGCTGCGTACAGAGCACCAAGTCTATGAACTTCCAGATAATCACCCTCTTCTTGAAAAGTTGAAGTTGGATAGAAGGGAACCAGATGATCCTTGCTCATACCTTTTGGCTATATGGACACCAGGTGAAACAGCAAATTCCATCCAACTACCCGAAAAAAAGTGCAGTAATCAAGAACACCATCAATTGTGTCATGAGGAGGAGTGCTTCTCGTGCAACAGTGTCAGAGAAGCCAACTCCCTCATGGTTCGAGGGACTCTTTTGATACCATGTCGAACAGCAATGAGAGGAAGCTTTCCACTGAACGGTACCTATTTTCAAGTCAATGAGGTGTTTGCAGATCACGACTCAAGCCTCAACCCGATTGATGTTCCTAGGAACTGGTTATGGAATCTTCCTAGGCGTACTGTATATTTTGGGACCTCCATACCAACGATATTTAAAGGTTTGACTACACAAGGCATCCAACACTGTTTCTGGAGAGGATTCGTCTGTGTAAGAGGTTTTGACCAAAAATCAAGGGCACCCCGACCTTTGATGGCCAGGCTTCATTTTCCAGCCAGCAAATTGAACAGGGGAAGAGATGATTGCTTAGAGATAAATATCAGCATAGAGATGCAGAAACAAGTGTTGAACTCAGCGGCCAAGTCTACTCTCTCTTCTGGTGCTCCATGGGCTTCTGGGGTGGGATTGGTGCCCACTGCAATATCAGATAGAGGACTGGAGCTGCTATCAGCAACCTTTTGGTTTAGTGTCCTGGTATGTGAACATCTGAACTATTTCCTCTGGCCTATCAGAGGATTTCAATTGGAGATTCTGTCTGGTAACTTTCTAGGTGAGTTATTGGGAAGATCTGCTAAAATGGCCATCGATAAGCATGTTTCTATGGCCCCAAATCCTGAACCATCATGCAAGAATTTGATGATTATTCGATTTCCATCAGTAAAACATAATAGCAGTATCATGATTCTTGTGCTTAGAGTATGTGTAATGTCATTGGTTCTGGGTTTGCTTGGATGA | 6798 | 42.81 | MTISRGILCRLQNSKLNLTCMAPWPDRGLSLEVCQKPILFGKTEFDKEKRVLDQNNGQQRPEGLEEDEDFFAFRAQRDHEISKFVEFSDSEQRIALRKEAVSTNRMDSGEPEGNNKGHVEVEGGSWIPVTPMKPILPRPPLIYARMDRNQSRPHWLGSERLSAETSSGANGSYDWGAAQSGQLQVATHSIDALVGIPFLQLMALADAASIVGGNASDQIELESSSMKGRLGGSCITEATEYEISDHCQHAYDLNIVQPRFRASDRDSGSSDSGRGGYQPQELVSQYRTALAELNFNSKPIIMNLTIIAGENLQAAKAISATVCDNILEVSSEQKLPSLHLLDSIVKNIGRDYIKYFAERLPEVFCKAYRQVDPSVHPSMRHLFGTWIGVFPPQTLQIIEKELGFMPNDSSSSGTITSMPDLQAQCPNHSIHVNLNYIERQQLQQSGKVKGMTSEATGVATNVTQDVAQAKISIGRPWADTPIKVLDIQHPLRDAPNDIAQEKNITAAHTDYEYGSDLPRTTGIEIRVVDEGQDKPWSSVGTDLAENAGNLNKTPPPRQRRRKHRPKVIIEGKTKGTKPNLKTPSASPSMRKRGRKSGLSKSSATPPIEVTGETSDQEMLKHRRKSCRRAINFDSQAQTGDGSFNTRPLEQESLIQNIQSTTGLEEVRLEEVGSSTDPIWSMNQMLKSYESLPEKQAPPAEISVEHNSPEKGLPSNNQMEYNTEQNDKAISNSEEGNMVEIMINDDNQSLLGSSNGLIFCKNSTLTPRKQETCCLKKRSQAIKQADTRSVNLTGVHYNTLSAYQSMSWMHFPHICKKKRTEKGQNPVSSSAITSATAATHLLRPESACSFNDPQRNHTLSKSNTWIAGPQFNTCRSKTAAGHGGNDHQDKLQTYGGIMALGQTERTKKRSRTTKRVSDMAPPARIGDCEKQPMYPTNQPPLSSSAKNIITSQTCINGLFETMNATVAKKKRTKKNFPSSSTLLNIKKDLQDRRFVSFNPYQFFPNTSGTASEHGNQMCFIDAIVEQLKHLDINKESDNLGYRERALVPYNVQNQEQNAIVIYGRDGTIVPFNPIKKRRPRPKVELDEETGRVWKLLMGNINSEGIDGTDEEKIKWWEEERKVFRGRADSFIARMHLVQGDRRFSQWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPPKPKCHEASCYQEPIIDLDEPEECMLNLEDGTKLNKQIMQQQISEEGSLMKNEVEKSEGRIVVDNNESSGSNVDDGSSNKEPEKKIFSSSHNIVEACSNSLGEISLTGTSPMQECFSAEKEIYDSFSFQDCLDSSISQTSESIEPSSEGNSEDLPSWSKEAHIDSSSEELIQMAGLNTLNAHVTIDSFVDQSENTTDNKLVGKKCDNGIDDAFQPDDHEISIKDYASHLSGCQMQQNHTSESLEVDYSQTCNGVQTSNECQNKDENFHTEQSTLSVESDNHANVEMELIVDIHEAPLSSSELSINAKEPSLTLQSQGSVIEDPQNVESPAECTNNVHEIQPKISPNATGITTQSNPKEYDYLLSNEFKEIKPATSRSQRKQIAKEKEGNRNWDDLRKQAEANGRKRQRTENTMDSLDWEAVRCADVNEIAHTIRERGMNNMLAERIKDFLNRLVKDHGSTDLEWLRDVAPDQAKEYLLSVRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLGLPAPEDKRIVTTTESREADNNQARTIDQPMLSLPPSTISSEEIKPSELSHHSDEKTTFGTCVPIIEEPATPEQESTTQAALSDIEDAFHEDPDEIPVIKLDIEEFSLNLQNYVQKNMELQEGDMSKALIALTPEAASIPMPKLKNVSRLRTEHQVYELPDNHPLLEKLKLDRREPDDPCSYLLAIWTPGETANSIQLPEKKCSNQEHHQLCHEEECFSCNSVREANSLMVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIDVPRNWLWNLPRRTVYFGTSIPTIFKGLTTQGIQHCFWRGFVCVRGFDQKSRAPRPLMARLHFPASKLNRGRDDCLEINISIEMQKQVLNSAAKSTLSSGAPWASGVGLVPTAISDRGLELLSATFWFSVLVCEHLNYFLWPIRGFQLEILSGNFLGELLGRSAKMAIDKHVSMAPNPEPSCKNLMIIRFPSVKHNSSIMILVLRVCVMSLVLGLLG | 2265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 43784285 | 43803081 | - | Lag0026963.1 | Lac10g2918 | 585449 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g2918 | 2265 | ProSiteProfiles | CID domain profile. | 278 | 406 | IPR006569 | - | |
Lac10g2918 | 2265 | Pfam | RRM in Demeter | 2011 | 2111 | IPR028925 | - | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 902 | 932 | - | - | |
Lac10g2918 | 2265 | Gene3D | - | 1665 | 1777 | IPR023170 | - | |
Lac10g2918 | 2265 | CDD | CID_Pcf11 | 283 | 395 | IPR047415 | - | |
Lac10g2918 | 2265 | PANTHER | TRANSCRIPTIONAL ACTIVATOR DEMETER | 534 | 2120 | IPR044811 | GO:0019104(InterPro)|GO:0035514(InterPro)|GO:0141166(InterPro) | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 1316 | 1333 | - | - | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 1794 | 1822 | - | - | |
Lac10g2918 | 2265 | Pfam | CID domain | 287 | 395 | IPR006569 | - | |
Lac10g2918 | 2265 | Gene3D | - | 274 | 403 | IPR008942 | - | |
Lac10g2918 | 2265 | CDD | ENDO3c | 1596 | 1714 | IPR003265 | GO:0006284(InterPro) | |
Lac10g2918 | 2265 | SMART | 558neu5 | 281 | 403 | IPR006569 | - | |
Lac10g2918 | 2265 | SMART | ccc3 | 1749 | 1769 | IPR003651 | GO:0051539(InterPro) | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 1551 | 1574 | - | - | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 692 | 718 | - | - | |
Lac10g2918 | 2265 | SUPERFAMILY | DNA-glycosylase | 1124 | 1771 | IPR011257 | GO:0003824(InterPro)|GO:0006281(InterPro) | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 1224 | 1264 | - | - | |
Lac10g2918 | 2265 | SMART | endo3end | 1586 | 1748 | IPR003265 | GO:0006284(InterPro) | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 1316 | 1345 | - | - | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 532 | 618 | - | - | |
Lac10g2918 | 2265 | MobiDBLite | consensus disorder prediction | 1792 | 1833 | - | - | |
Lac10g2918 | 2265 | FunFam | polyadenylation and cleavage factor homolog 4 | 276 | 403 | - | - | |
Lac10g2918 | 2265 | FunFam | DNA glycosylase/AP lyase ROS1 | 1670 | 1778 | - | - | |
Lac10g2918 | 2265 | SUPERFAMILY | ENTH/VHS domain | 279 | 402 | IPR008942 | - | |
Lac10g2918 | 2265 | Pfam | Permuted single zf-CXXC unit | 1977 | 2006 | IPR028924 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g2918 | Lac-Chr10:43784285 | Lac9g2674 | Lac-Chr9:45083654 | 1.40E-203 | dispersed | |
Lac10g2914 | Lac-Chr10:43740027 | Lac10g2918 | Lac-Chr10:43784285 | 9.80E-145 | proximal | |
Lac10g0707 | Lac-Chr10:5446038 | Lac10g2918 | Lac-Chr10:43784285 | 1.40E-41 | transposed | |
Lac13g0639 | Lac-Chr13:4762154 | Lac10g2918 | Lac-Chr10:43784285 | 1.90E-275 | transposed | |
Lac1g2240 | Lac-Chr1:43794648 | Lac10g2918 | Lac-Chr10:43784285 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g2918 | - | - | - | 0.0 |