Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2926 ATGTTCACGGCGGGGACGGACACAACCACCAGCACACTAGAATGGGCAATGGCGGAGCTCCTCCACAACCCGGCGGCGATGCAGAAACTTCAGGCAGAGCTCCGATCTACCATCCCGCCGGACGGCAACCTCGAAGAAACCCATCTCCAAAACCTCCCGTATCTCGACGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCGCCGTTGCCGTTCCTCTTCCCGAGAATGGCCATGAAGCCCTGCAAAATCCTCGGCTACCGGATTCCGGCGGAGACCCAAGTTTTGGTCAACGTTTGGGCCATCGGCCGAGACCCAGAAAACTGGAAAGACGCTACGGTTTTCTCTCCGGAGAGATTCTTGGAGCCCGGCGCCGGGGCCGGGAAGGATTTTAAAGGTCAGCACTTTGACTTCCTTCCTTTTGGGTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGAGTTCTTCCGGTAGCTTTGGGTTCGTTGATTCTGTCGTTTGATTGGGCCCTGCCGGACGGAATGTTGCCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACTCTTAGAAAGAAAGTTCCTTTGAAGGCCATTCCGACACCTTATAAACGACGCCGTTTCTGA 630 57.62 MFTAGTDTTTSTLEWAMAELLHNPAAMQKLQAELRSTIPPDGNLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNVWAIGRDPENWKDATVFSPERFLEPGAGAGKDFKGQHFDFLPFGSGRRMCPAVPLASRVLPVALGSLILSFDWALPDGMLPEEMDMSEQMGITLRKKVPLKAIPTPYKRRRF 209
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 43850544 43851173 - Lag0026971.1 Lac10g2926 585457
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2926 209 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 204 - -
Lac10g2926 209 Gene3D Cytochrome P450 1 200 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 Pfam Cytochrome P450 1 191 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 140 149 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac10g2926 209 SUPERFAMILY Cytochrome P450 1 203 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS E-class P450 group I signature 147 170 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS E-class P450 group I signature 137 147 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 PRINTS P450 superfamily signature 138 147 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2926 209 FunFam Predicted protein 2 199 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2926 Lac-Chr10:43850544 Lac11g2179 Lac-Chr11:37937363 4.80E-58 dispersed
Lac10g2926 Lac-Chr10:43850544 Lac13g0123 Lac-Chr13:857567 4.00E-52 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2926 - - - 0.0