Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2927 ATGGAGTTTGAAATTGCAGGTTTTATTTTTGTCTCCATTCTGTGGGGTTTCTGGGTATGGCGCCGCCGTGGATCGGCGGCGACGGAGCAGCTTCCGCCGGGGCCACCTCGTTGGCCAGTGGTCGGAAACTTGCCCCAACTCAGCTTCTCCGCTCACGAATCCTTCACCAAACTCGCCACCAAGTACGGCCCAATCATGACCCTCCATCTCGGGTCGATGAGCACGGTGGTCGTCTCGTCGAGCACGGCGGCGCGTGAGATGTTCAAAAACCACGACGCGCCGCTGGCAGGACGCATGATTTACGAGGCAATGAAAGGGAACCACGGCACCGAAGGCTCCCTAATCACCTCCCAGTACGGGCCCCACTGGCGGATGCTGAGACGCCTCGCCACCACCGAGTTCTTCGTCACGCGCCGCCTCGACGCCATGCGACACATCCGCCGGCGCTGCGTGGACGCGATGATCCGCCACGTGGGCGACAACGGCGCGTGTGGGGACGCGCCGCCGATCGAGTTGGGGAGATTGTTCTTCATAATGAGCTTTAACCTGATCGGGAATCTGATATTTTCGAAAGATCTAGTGGAGCGGAATTCGACGAGGGGGAAGGGATTTTACTACCATGCGAGACGGGTGATGGAGATGGCCGGAAAGCCGAACGTGGCGGACTTTTTGCCGGCGTTCCGGTGGGTGGATCCGCAGGGGATAAGGAGGAAGACGCAGTTTCATGTGAAGAAAGCGTTTGAAATTGCAGGGGAGTTTATAAGAGAGAGATTGAAGGAAAAAGAAAGTGAAGAGAAGAGAAAAGAAGAAGGAAGAAAGGATTATTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGCGTCGAGGAGCCTTCATGTTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGTAAGCTATTATTATTCATAA 930 54.95 MEFEIAGFIFVSILWGFWVWRRRGSAATEQLPPGPPRWPVVGNLPQLSFSAHESFTKLATKYGPIMTLHLGSMSTVVVSSSTAAREMFKNHDAPLAGRMIYEAMKGNHGTEGSLITSQYGPHWRMLRRLATTEFFVTRRLDAMRHIRRRCVDAMIRHVGDNGACGDAPPIELGRLFFIMSFNLIGNLIFSKDLVERNSTRGKGFYYHARRVMEMAGKPNVADFLPAFRWVDPQGIRRKTQFHVKKAFEIAGEFIRERLKEKESEEKRKEEGRKDYLDVLLEFRGDGVEEPSCFSSWIINVIVFVSYYYS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43858790 43859719 + Lag0026972.1 Lac10g2927 585458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2927 309 Gene3D Cytochrome P450 25 295 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2927 309 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 302 - -
Lac10g2927 309 Pfam Cytochrome P450 32 285 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2927 309 SUPERFAMILY Cytochrome P450 18 285 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2927 309 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2927 309 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac10g2927 309 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2927 Lac-Chr10:43858790 Lac11g2564 Lac-Chr11:41700489 1.40E-40 dispersed
Lac10g2927 Lac-Chr10:43858790 Lac11g2232 Lac-Chr11:38358842 6.80E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2927 - - - 0.0