Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g2988 ATGGCGGCCTCCTCCGGCAACCCCTTCTGGTACCAGTTGGTCTTCGGCCGCTGGTTCTCCGTCTTCGCTTCCATTCTCATCATGTCCGTCTCCGGCGCCACCTACATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTGGGCTACGACCAAACCACCCTCAATCTGCTCAGCTTCTTCAAGGATTTAGGCGGCAATGTCGGCGTCATCGGCGGCCTCATCAACGAGGTCGCCCCGCCGTGGGTGGTTCTTTTAATCGGCGCCGTCATGAACCTCTTCGGCTACATGATGATTTGGCTGGCCGTAACCAGCCGGATCCCGAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGCATCGGAGCTAATTCTCAGACGTTTGCGAATACAGGGGCTCTCGTCACTTGCGTCAAGAACTTCCCGGAGAGTCGCGGCAGCGTTTTGGGCCTTTTGAAGGGCTTCGTCGGATTGAGCGGTGCCATTTTGACCCAGCTTTACCATGCGTTTTACGGCAACAACTCCAAATCTCTCATCCTCTTAATCGCTTGGCTTCCGGCCGCCGTCTCTGTAACTTTCCTCCGTTTCGTTCGCATCATTAAGGATCTCCGGCAGCCGAATGAGCTCAAAGTCTTCTTCCACATCCTTTATATTTCCCTTGGCCTTGCTGGGTCGTTAATGGTTTTGATTATTCTGCAAAATCGGCTGAAATTTCAACAAATGGAATACGCCGGAAGTGCCATTGTTGTGATTGTTCTGCTTTTACTCCCTCTGGCCATCGTTTTCAGAGAGGAATTGAATGTTTGGAAGAGTAAAATCGAAAACCCAATTTCTCAATTGGAGTTAGCATCTCAACAACCGCCGCCGCGACTGACCTCGGCGGTGCCACCGGCGCCGCCGAGCCCTCCGTCAGGCTCCTGCATTAAGAACACATTCAAACCCCCAAGCAGAGGAGAGGACTACACAATTCCGCAAGCCGTTTTCAGCATCGATATGATTATTCTCTTCATCGCTACAATCTGTGGCGTCGGTGGAACATTGACGGCGATCGACAATTTGGGTCAAATCGGAGAATCTTTAGGGTACCCATCTCACAGCACCACCACGTTCATCTCTCTCGTCAGCATATGGAATTACCTCGGCCGTGTAGTCGCCGGATTCGCGTCGGAATTCCTCTGGAAAAAGTACAAACTCCCACGTCCTCTGTTTTTCTTCGTGACGGTTATTCTATCTTGCGTCGGCCATCTTCTAATCGCCTTCGGAGTTCCCAATTCGCTCTATTTTTCTTCGATCATCATCGGGTTCTGCTTCGGCGCGCAGTGGCCGTTGATCTTCGCAATCATATCGGAAATTTTCGGGCTGAAGTATTACGCGACTCTGTACAATTTGGGGGGAGTGGCAAGCCCGATTGGAGCGTATATTTTGAATGTGAGAGTGGCGGGTCGTTTGTACGACGAAGAGGCACGACGGCAGATGGAGGCGGCGGGGCGGCGGAGAAAAGCAGGGGAGGATTTGAGTTGCTTGGGAGTGGAATGTTACAGAAAGGCGTTTCTAATAATCACGGCGGCGACGATTTTTGGGGCGTTTGTTTCGTTGATTTTGGTGATTAGGACATGGAAGTTTTATAAGGGCGATATCTATAGGAAGTTCAGGGAGGAAGAAGGTGAAGAGGTGGAGGCGAAAATGGCGGCTCCGACGAACAGTGCGGTGGCGAAAACTGAAACTGTTTAG 1731 51.47 MAASSGNPFWYQLVFGRWFSVFASILIMSVSGATYMFGLYSSDIKSSLGYDQTTLNLLSFFKDLGGNVGVIGGLINEVAPPWVVLLIGAVMNLFGYMMIWLAVTSRIPKPQIWHMCLYICIGANSQTFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGNNSKSLILLIAWLPAAVSVTFLRFVRIIKDLRQPNELKVFFHILYISLGLAGSLMVLIILQNRLKFQQMEYAGSAIVVIVLLLLPLAIVFREELNVWKSKIENPISQLELASQQPPPRLTSAVPPAPPSPPSGSCIKNTFKPPSRGEDYTIPQAVFSIDMIILFIATICGVGGTLTAIDNLGQIGESLGYPSHSTTTFISLVSIWNYLGRVVAGFASEFLWKKYKLPRPLFFFVTVILSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGVASPIGAYILNVRVAGRLYDEEARRQMEAAGRRRKAGEDLSCLGVECYRKAFLIITAATIFGAFVSLILVIRTWKFYKGDIYRKFREEEGEEVEAKMAAPTNSAVAKTETV 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44461487 44463217 - Lag0027033.1 Lac10g2988 585519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g2988 576 MobiDBLite consensus disorder prediction 287 306 - -
Lac10g2988 576 SUPERFAMILY MFS general substrate transporter 8 201 IPR036259 -
Lac10g2988 576 CDD MFS_Mch1p_like 16 528 - -
Lac10g2988 576 Pfam Nodulin-like 17 262 IPR010658 -
Lac10g2988 576 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 551 - GO:0016020(PANTHER)
Lac10g2988 576 SUPERFAMILY MFS general substrate transporter 219 540 IPR036259 -
Lac10g2988 576 Gene3D MFS general substrate transporter like domains 326 541 IPR036259 -
Lac10g2988 576 MobiDBLite consensus disorder prediction 290 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1494 Lac-Chr10:14801630 Lac10g2988 Lac-Chr10:44461487 4.40E-93 dispersed
Lac10g2988 Lac-Chr10:44461487 Lac13g0676 Lac-Chr13:5152703 3.30E-205 dispersed
Lac7g2487 Lac-Chr7:42586346 Lac10g2988 Lac-Chr10:44461487 2.30E-136 transposed
Lac8g2982 Lac-Chr8:46686858 Lac10g2988 Lac-Chr10:44461487 8.90E-82 transposed
Lac9g0513 Lac-Chr9:9795469 Lac10g2988 Lac-Chr10:44461487 1.70E-83 transposed
Lac9g0838 Lac-Chr9:17664564 Lac10g2988 Lac-Chr10:44461487 7.20E-12 transposed
Lac1g2190 Lac-Chr1:43350846 Lac10g2988 Lac-Chr10:44461487 3.10E-212 wgd
Lac10g2988 Lac-Chr10:44461487 Lac8g2375 Lac-Chr8:41858954 6.20E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g2988 - - - 0.0