Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g3060 | ATGACGGATTCAGTGAGAGGGATGATTATTTATAGGGAATCGAAGGATGCGAGAACGCGGAGAGTGAACATTGACAAAGCTTCGCTTTCAATCACTCAGAAAAGTCGTTGTATCGACGAAAGATTATTAAGTGTTCATTTTACAATGAAACATGTAGTTTTGCACGGATACCTTACTACAGGCTACATCATATGGACAAAAAGGGAGAAGGTTGTGAAGGTGACCGATGGCGATCGCCCAAAAAGGGAGAAGGTTGTGAAGTTCAACGGCCGGCGCTTGCGATGCGACTTCACACCAGTCCGAAGAAAACTTCCTGCCGTCCGAGACTCAGACCGAAGCTTTGTTCATGTCATTCCCTATAATTACTTCTCACTGAATGGGCCAGATTCTGCCGAACCACATCCATGGCGTCCGCCCAGTGAGGTGCAAGAAATTCCACCTCCGTCGTTGGACGCCACCGCCGAACAGCCTCCCCTGTTCGATGGAACTACCAGGTTGTATACTGCTTACATATGCCCTTATGCACACCGTGTTTGGATCATCCGGAATTTTAAGGGACTGCAAGATAAAATTAAGCTAGTTCCTCTCAACCTTTTTAATAGGCTTTCCTGGTATAAGGAGAAAGTATACTCTGTAAACAAGGTGCCATCTCTTGAACATAATGGAAAAGTTATTGGAGAAAGTCTTGATCTGCTCAAATATATTGATAGCAACTTTGAAGGGCCTTCTCTTCTTCCAGATGACTCTGGTAAAATAGAGTATGCCGAAGAGTTGATATCCTACAGCGAAACATTCAACGGCACAATAATCTCTGCATTTAAAGGTGACATCGCTAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAACGCTTTGCAAAAATTTGATGGCCCCTTCCTACTTGGAGAAATCAGTCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCAAGTTTTCTTATTAGAGGCTCTCAAGTATGATATCACAGAAGGAAGGCCTAAACTAACTGCATGGATTGAGTTTCATCTACCTGCTTTCTTGTTCCTTGGTTTCTCGGCTTCCAATGCATGTTTTCCTATCTTTGGATTTGAACCACAGATCTTGTAG | 1113 | 43.22 | MTDSVRGMIIYRESKDARTRRVNIDKASLSITQKSRCIDERLLSVHFTMKHVVLHGYLTTGYIIWTKREKVVKVTDGDRPKREKVVKFNGRRLRCDFTPVRRKLPAVRDSDRSFVHVIPYNYFSLNGPDSAEPHPWRPPSEVQEIPPPSLDATAEQPPLFDGTTRLYTAYICPYAHRVWIIRNFKGLQDKIKLVPLNLFNRLSWYKEKVYSVNKVPSLEHNGKVIGESLDLLKYIDSNFEGPSLLPDDSGKIEYAEELISYSETFNGTIISAFKGDIAKEAGAQFDYLENALQKFDGPFLLGEISQVDIAYIPFVERFQVFLLEALKYDITEGRPKLTAWIEFHLPAFLFLGFSASNACFPIFGFEPQIL | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 45086947 | 45091486 | - | Lag0027105.1 | Lac10g3060 | 585591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g3060 | 370 | SUPERFAMILY | Thioredoxin-like | 157 | 244 | IPR036249 | - | |
Lac10g3060 | 370 | Gene3D | Glutaredoxin | 139 | 240 | - | - | |
Lac10g3060 | 370 | Gene3D | - | 241 | 345 | - | - | |
Lac10g3060 | 370 | SUPERFAMILY | GST C-terminal domain-like | 239 | 342 | IPR036282 | - | |
Lac10g3060 | 370 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 162 | 243 | IPR004045 | - | |
Lac10g3060 | 370 | Pfam | Glutathione S-transferase, N-terminal domain | 166 | 242 | IPR004045 | - | |
Lac10g3060 | 370 | Pfam | Glutathione S-transferase, C-terminal domain | 280 | 342 | - | - | |
Lac10g3060 | 370 | FunFam | Glutathione S-transferase L2, chloroplastic | 138 | 240 | - | - | |
Lac10g3060 | 370 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 141 | 342 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g3060 | Lac-Chr10:45086947 | Lac10g3062 | Lac-Chr10:45103231 | 1.10E-97 | dispersed | |
Lac10g3060 | Lac-Chr10:45086947 | Lac10g3061 | Lac-Chr10:45091571 | 2.40E-100 | tandem | |
Lac10g3060 | Lac-Chr10:45086947 | Lac13g0871 | Lac-Chr13:7072635 | 3.70E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g3060 | K00799 | - | csv:101210504 | 363.229 |