Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac10g3062 | ATGGCTACTCTAAATGCGGTGCCGGAAGTTCGTCCACCGTCATTGGAAGCCAATGCCGAACAACCTCCCCTTTTCGATGGAACCACCAGGTTGTATATGGCTTATTATTGCCCGTTTGCACAGCGTGCTTGGATCACAAGAAATTACAAGGGGTTACAAGATAAAATTAAACTTGTGCCTCTAAACCTTCAAAACAGGCCTGTCTGGTATAAGGAAAAAGTCAACCCTTCAAACAAGGTGCCAGCTTTGGAGCACAATGGAAAAGTTATTGGAGAAAGCCTTGATTTGATCAAATACATAGATAGTAACTTTGAAGGACCTTCTCTTTTCCCAGATGATCCTGCCAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACCGATACATTTACTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGTCCACAATTTGATTACCTTGAGAATGCTCTGCAGAAATTTGATGATGGGCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAAAGGTTCCATGTTTTCTTAGCTGAGGTTTTCAAGTATGATATCACAGAAGGAAGGCCTAATCTAGCTGCATGGATTGAGGAGTTCAACAAGATTGATGCTTACAAGCAAACCAAATACGATCCTAAAGCCATTGTTGAACTTTACAAGAAACGTTTCATGGTACCATATGCTTTAACACAATATCTTTCTATAATTAGATTACTTTTCTCTAATAATTTTCATTGCTTCAACTCCTTTACGATGATCGTAAATGCAACTTTTGTTGTTGTCAGAGTGGAAGAGGTTCTACCTCCGTCGTTGGACGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACCAGGTTGTATACTGCTTACATATGCCCATATGCTCAACGTGTGTGGATCACCCGGAATTACAAGGGACTACAAGACAAAATTAAGCTATTTCCTCTCAACCTTTTAAATAGGCCTGACTGGTATAAGGAAAAAGTATACCCTGTAAACAAGGTTCCATCTCTGGAACATAATGGGAAAGTTATTGGAGAAAGTCTTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAGTGATACGTTTATTGGTGCAGTAGTCTCTTCATTTAAAGGTGACACTGCAAAGGAAGCAGGTGCTCAATTTGATTATTTGGAAAATGCTTTGCATAAATTCGATGGCCCCTTCCTCCTTGGGGAAATCAGTCAGGTGGATATAGGATACATTCCATTTATTGAAAGGTACCACATTGTCTTATTGGAGGTTCTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGTGCGTAGTATGTGCATTTTGCATTCTGATAGCTTTGTTGTGAAGATAAATGGTTTATTCTATACTTTCTAG | 1494 | 40.5 | MATLNAVPEVRPPSLEANAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPVWYKEKVNPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDPAKRQFGEELLAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLAEVFKYDITEGRPNLAAWIEEFNKIDAYKQTKYDPKAIVELYKKRFMVPYALTQYLSIIRLLFSNNFHCFNSFTMIVNATFVVVRVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLFPLNLLNRPDWYKEKVYPVNKVPSLEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTFIGAVVSSFKGDTAKEAGAQFDYLENALHKFDGPFLLGEISQVDIGYIPFIERYHIVLLEVLKIDITEGRPKLAAWIEVRSMCILHSDSFVVKINGLFYTF | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 45103231 | 45110952 | - | Lag0027107.1 | Lac10g3062 | 585593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac10g3062 | 497 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Lac10g3062 | 497 | SUPERFAMILY | GST C-terminal domain-like | 104 | 234 | IPR036282 | - | |
Lac10g3062 | 497 | Gene3D | Glutaredoxin | 2 | 105 | - | - | |
Lac10g3062 | 497 | Gene3D | Glutaredoxin | 270 | 372 | - | - | |
Lac10g3062 | 497 | FunFam | Glutathione S-transferase L2, chloroplastic | 2 | 105 | - | - | |
Lac10g3062 | 497 | Pfam | Glutathione S-transferase, C-terminal domain | 150 | 208 | - | - | |
Lac10g3062 | 497 | Pfam | Glutathione S-transferase, C-terminal domain | 415 | 474 | - | - | |
Lac10g3062 | 497 | CDD | GST_C_Lambda | 113 | 231 | - | - | |
Lac10g3062 | 497 | Gene3D | - | 373 | 480 | - | - | |
Lac10g3062 | 497 | Gene3D | - | 106 | 237 | - | - | |
Lac10g3062 | 497 | FunFam | Lambda class glutathione S-transferase | 106 | 237 | - | - | |
Lac10g3062 | 497 | Pfam | Glutathione S-transferase, N-terminal domain | 31 | 107 | IPR004045 | - | |
Lac10g3062 | 497 | Pfam | Glutathione S-transferase, N-terminal domain | 298 | 374 | IPR004045 | - | |
Lac10g3062 | 497 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 6 | 264 | IPR044629 | GO:0004364(InterPro)|GO:0004364(PANTHER)|GO:0010731(PANTHER) | |
Lac10g3062 | 497 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 27 | 108 | IPR004045 | - | |
Lac10g3062 | 497 | SFLD | Main (cytGST) | 30 | 210 | - | - | |
Lac10g3062 | 497 | SUPERFAMILY | Thioredoxin-like | 21 | 109 | IPR036249 | - | |
Lac10g3062 | 497 | SUPERFAMILY | GST C-terminal domain-like | 371 | 474 | IPR036282 | - | |
Lac10g3062 | 497 | SFLD | Glutathione Transferase (cytosolic) | 30 | 210 | IPR040079 | - | |
Lac10g3062 | 497 | SFLD | Glutathione Transferase (cytosolic) | 297 | 474 | IPR040079 | - | |
Lac10g3062 | 497 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 294 | 375 | IPR004045 | - | |
Lac10g3062 | 497 | FunFam | Glutathione S-transferase L2, chloroplastic | 269 | 372 | - | - | |
Lac10g3062 | 497 | SUPERFAMILY | Thioredoxin-like | 289 | 376 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g3060 | Lac-Chr10:45086947 | Lac10g3062 | Lac-Chr10:45103231 | 1.10E-97 | dispersed | |
Lac10g3062 | Lac-Chr10:45103231 | Lac13g0871 | Lac-Chr13:7072635 | 5.00E-93 | dispersed | |
Lac10g3061 | Lac-Chr10:45091571 | Lac10g3062 | Lac-Chr10:45103231 | 6.90E-109 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac10g3062 | K00799 | - | csv:101210004 | 452.981 |