Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g3074 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCCAGGTATTCGATCACCTCGTCGCCGTCGAGAACTCCGGCCTTGACTCCACGCCGAAGCTTCAACGACGCGATGATCGAACAGAGCGTCGAATCTGCGGCGGCGATTATCATGAAATGGAATCCGGATTCCTCCACTTACGCGAAGGTTACTTCGATGTTCTATGAAGATAAACGAGAAGCCATGCAGTTCATTAAGCGAGTGAATGATCTTCAGAAGGCGATGCATCTGATGGTTTCGGAAGATTCTGGTTCTTCGGCTCCGGAAAGGCTTGTTTACGCTCAAGGATTGATGGAAATCGCCATGAAGCGACTTCAGAAGGAGTTTTATCAGATTCTCTCGATGAATCGCGCTCATCTCGATCCGGAATCTGTTTCCACTCGGTCGTCTCGCTGCTCCACCAGATCGAGCACTTCCGTTGATTTCGACGAGGAAGGAACCCTAGACGAGGAAATCCAAGTCGTAGGGGACTCAATCTCTGAAGTTGAGCAAGTTTCTTTCAATGTCATGGAGGATTTGCGCGTCATAGCTGAGTGCATGATCTCCTCTGGCTACGCTAAAGAGTGCGTTAGTATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGGCTCGGACTTGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATCAAACTCGCAATTAGAACGCTGTTCGTTGGCGAGCGAATTCTCTGCGACCACGTGTTTTCCTCTTCTGAATCGATTAGTGAATCCTGTTTTGCTGATATATCCAGAGAAGGCGCTTTGCTTCTGTTCGGATTCCCCGAACTTGTTGCCAAGAGCAAGAAATCGCCGGAAAAAATGTTCCGTGTTCTTGATATGTACTCCTCAATCGCCGAAAACTGGGCGGAGATCGAAACGATTTTCTCCTCCGAGTCCACATCTGTAGTTCGGTCTCAAGCTCTGAACTCACTCGCGAAACTCGCCGAGTTAGTCCGCGCGATTGTCATGGATCTCGAGTTGTCGATTCAGAAGAACTCATCCAAATCGCCGGTCTCTGGCGGCGGCGTTCATTCATTGACGCTTCTCTCGATGAATTACCTCACCTTCCTCGCCGATTACGGCAACATCTTGACGGATATTTTCGCCGATTGGATTCCGCCTGAGAAATCCTCTCTCGATCAAATTTTCTTCAGCAGTTCAGAATCCGACGAATCTACAACGGCTTCTGCAATCTCCTTACGATTCGGATGGCTAATTCTAGTCCTCCTCTGCAAACTCGACAGCAAAGCGAAACGCTACAAAGACGTTTCACTCTCGTATCTCTTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCAGTACCTTCTCGGCGACGAGTGGATCACGAAGCACGAGGTGAAAATAAGGCAATTCGCGATCAAGTACGAGGCGTTGGCTTGGGGCAGAGTCTTCGATTCCTTGCCGGAGAATCCAACGGCGAAATTTTCACAGGAGGAAGCCAAAGAAATCTTCAGGAACTTCAATATGGCATTCCAAGAAACGCATCGGAAACAGAAATCCTTCTTCATTCCTGATTCAAAGCTTCGAGACGAAGTTAAACTATCAATCGGTAGAAAGCTTGTGTCGTTCTATGGAGAATTTTACAGAGCGCAAAAAGCTTACGCCGGTGCTGATGAAAAGCCGTACATCAGATTCTCGCCAGAGGATATCGGTAACTATCTTTCCGATCTCTATTTTGAGCCGTCCGATTGGGCGAGCGTTTCGACCTCGTCGCCGTCGTCGACCTCCTCCTCTCACCGACGGGAACTTGGGCCCCGGTAA 1926 48.23 MPRKGMRSLLFQFSSPSNSISRYSITSSPSRTPALTPRRSFNDAMIEQSVESAAAIIMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKAMHLMVSEDSGSSAPERLVYAQGLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRCSTRSSTSVDFDEEGTLDEEIQVVGDSISEVEQVSFNVMEDLRVIAECMISSGYAKECVSMYKVIRKSIIDEGVYRLGLEKLSPSRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDHVFSSSESISESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSIAENWAEIETIFSSESTSVVRSQALNSLAKLAELVRAIVMDLELSIQKNSSKSPVSGGGVHSLTLLSMNYLTFLADYGNILTDIFADWIPPEKSSLDQIFFSSSESDESTTASAISLRFGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLQYLLGDEWITKHEVKIRQFAIKYEALAWGRVFDSLPENPTAKFSQEEAKEIFRNFNMAFQETHRKQKSFFIPDSKLRDEVKLSIGRKLVSFYGEFYRAQKAYAGADEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRRELGPR 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45202775 45204700 - Lag0027119.1 Lac10g3074 585605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g3074 641 Gene3D Exocyst complex component Exo70 56 619 - -
Lac10g3074 641 Pfam Exocyst complex component Exo70 N-terminal 50 134 - -
Lac10g3074 641 MobiDBLite consensus disorder prediction 619 641 - -
Lac10g3074 641 PANTHER EXOCYST COMPLEX PROTEIN EXO70 48 614 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Lac10g3074 641 FunFam Exocyst subunit Exo70 family protein 67 620 - -
Lac10g3074 641 SUPERFAMILY Cullin repeat-like 53 613 IPR016159 -
Lac10g3074 641 Pfam Exo70 exocyst complex subunit C-terminal 251 611 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g3074 Lac-Chr10:45202775 Lac3g1916 Lac-Chr3:21554657 6.80E-119 dispersed
Lac2g3036 Lac-Chr2:48150287 Lac10g3074 Lac-Chr10:45202775 3.80E-14 transposed
Lac1g2070 Lac-Chr1:42231880 Lac10g3074 Lac-Chr10:45202775 1.00E-145 wgd
Lac10g3074 Lac-Chr10:45202775 Lac13g0853 Lac-Chr13:6913197 6.10E-144 wgd
Lac10g3074 Lac-Chr10:45202775 Lac9g2512 Lac-Chr9:43821538 2.50E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g3074 K07195 - csv:101208543 1060.06