Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac10g3126 ATGTTCTTCAAGCTCGCAATTGTAGTGTCTCTAATTATTACCTCAGTTTCAGCTGCTTCTGAAGGTCTCAGCTTCATCTTCAATGGCTTCCAGCCTGCAAATCTATCACTCGAAGGCATGGCCACTGTTACCTCCAATGGCTTCTTGAAACTGACCAACGAGACCAGGCATAGATTTGGCCATGCCTTTTATCCTAATCCTATAAATTTTTTCGACTCCTCTTCTAGCGTTTCCTCTTTCTCAACCACTTTCGTCTTTGCCATTATTTCTGAATTCCCAACTCTAAGTGGCCATGGAATTGTCTTCGTGGTGGCTCCGATGAAAGTTTTCCCTGGAGTTCGTCCAAGCCAGTACCTTGGCCTTTTCAATGAGAAAAACAATGGTAACGCAACCAACCATGTATTTGCTGTAGAGCTCGACACGATTCAGAATACAGAGTTCGATGATATTGATGATAATCATATTGGCATAGATATAAACGGGTTGACCTCTGAGAAAGCTGAATCTGCTGGATTTTATTCCGACAACGATGGGAAATTCAGAAACTTGAGCCTTATTAGTGGCCAACTAATGCAGGTTTGGATTGAATACGATGGCTCCAACAAAGTACTCGATGTCACTCTGGCGCCAATTCATATTCCCAAACCCAAAAAGCCACTTTTGTCTCTCTCCCGAAACCTTTCATCTGTCATGAAAAACTCCATGTACGTTGGCTTTTCAGCCTCTACAGGCTCAATTCAAACTTCTCATTATGTTTTAGGTTGGAGCTTCAGTATAAATAGAGAGGCTCAATGTCTTGACCCTTCCCTGCTTCCAAAGTTTCCTGGGAGAAAAGGAAGATCCAAGCTTTTATCGATTGGGTTGCCTTCGATTTCTGCAGGGATTGTTTTATGGGTGGTTTTAGGTATTCTGATCAGAAGGAAGCAGAAGTTCGCCGAGCTACTGGAAGACTGGGAACTTGAATATGGGCCTCACAGGTTCAAATACAAAGATTTATACATTGCTTCAAATGGATTTAAAGAGAGAGAGCTTCTGGGTTCTGGCGGATTTGGACGAGTCTACAAAGGGATATTACCAAACTCTAAACTTGAAATCGCTGTCAAAAGAGTCTCTCATGAATCAAGGCAGGGAATGAAGGAATTCGTGGCTGAGATTGTAAGTCTTGGGAGGCTTCGCCACAGAAACCTCGTACAATTATTAGGTTATTGCAGACGCAAAGGAGAGCTGCTTTTAGTGTATGATTGCATGGCCAATGGAAGCTTGGATAAGTATCTGTTTGGCCAACCAGATCACACTCTTAATTGGAACCAGAGGTTTGGAATCATAAAAGGTGTGGCCTCGGGGCTGCTCTACCTGCATGAAGAATGGGAACAAGTTGTGATTCACAGAGATGTCAAAGCCAGCAACGTCTTGCTAGACCGTGAGTTCAATGGAAGATTAGGAGATTTTGGGTTGGCGAGACTGTATGACCATGGAACAGATCCTCAAACTACCCACATTGTCGGAACACTCGGATATTTGGCTCCAGAGCTCACAAGAACAGGCCGGTCAACAATCCTTACAGACGTGTTTTCTTTTGGGGCATTTCTGCTGGAGGTTGCCACTGGAAGGAGGCCAATAGAGCTACGGGGAATGACAGAGGATGTAATATTGGTGGATTTGGTGTTTTCATGTTGGACGAGGGGAGTCATTCTAGAGGCCAAGGATCCAAACTTGGGAACAGAGTATGTAGCAGAGGAGATGGAGATGGTGCTGAAACTTGGATTGTTGTGTACTCAATTCAACCCAATGGCCAGGCCGAGCATGCGCCAAATTGTGCAGTACTTGGAAGGTGACGCTCCCATGCCGGAGATAACTTCCATCGATACCTCAAGCAGCAGGTATGAAGGTTTTGATGGCATTGCCATGTGTTGCTCTTCTTCCCTCGAGAGGGCTTTTGATCATTCTACTGAAACCCAGTCTCTCCTATCTTCTGGCCGTTGA 1983 44.63 MFFKLAIVVSLIITSVSAASEGLSFIFNGFQPANLSLEGMATVTSNGFLKLTNETRHRFGHAFYPNPINFFDSSSSVSSFSTTFVFAIISEFPTLSGHGIVFVVAPMKVFPGVRPSQYLGLFNEKNNGNATNHVFAVELDTIQNTEFDDIDDNHIGIDINGLTSEKAESAGFYSDNDGKFRNLSLISGQLMQVWIEYDGSNKVLDVTLAPIHIPKPKKPLLSLSRNLSSVMKNSMYVGFSASTGSIQTSHYVLGWSFSINREAQCLDPSLLPKFPGRKGRSKLLSIGLPSISAGIVLWVVLGILIRRKQKFAELLEDWELEYGPHRFKYKDLYIASNGFKERELLGSGGFGRVYKGILPNSKLEIAVKRVSHESRQGMKEFVAEIVSLGRLRHRNLVQLLGYCRRKGELLLVYDCMANGSLDKYLFGQPDHTLNWNQRFGIIKGVASGLLYLHEEWEQVVIHRDVKASNVLLDREFNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPELTRTGRSTILTDVFSFGAFLLEVATGRRPIELRGMTEDVILVDLVFSCWTRGVILEAKDPNLGTEYVAEEMEMVLKLGLLCTQFNPMARPSMRQIVQYLEGDAPMPEITSIDTSSSRYEGFDGIAMCCSSSLERAFDHSTETQSLLSSGR 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45578603 45580585 - Lag0027171.1 Lac10g3126 585657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac10g3126 660 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g3126 660 CDD STKc_IRAK 345 611 - -
Lac10g3126 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac10g3126 660 FunFam Lectin-domain containing receptor kinase A4.3 324 415 - -
Lac10g3126 660 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524(InterPro)
Lac10g3126 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 276 IPR013320 -
Lac10g3126 660 FunFam L-type lectin-domain containing receptor kinase V.9 22 264 - -
Lac10g3126 660 Gene3D - 21 267 - -
Lac10g3126 660 CDD lectin_legume_LecRK_Arcelin_ConA 23 260 IPR001220 GO:0030246(InterPro)
Lac10g3126 660 PANTHER - 27 617 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Lac10g3126 660 FunFam L-type lectin-domain containing receptor kinase S.4 416 622 - -
Lac10g3126 660 SUPERFAMILY Protein kinase-like (PK-like) 320 621 IPR011009 -
Lac10g3126 660 SMART serkin_6 339 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g3126 660 Gene3D Phosphorylase Kinase; domain 1 324 414 - -
Lac10g3126 660 Gene3D Transferase(Phosphotransferase) domain 1 416 629 - -
Lac10g3126 660 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac10g3126 660 Pfam Legume lectin domain 23 270 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g3126 Lac-Chr10:45578603 Lac1g1998 Lac-Chr1:41574633 1.60E-232 dispersed
Lac10g3126 Lac-Chr10:45578603 Lac10g3127 Lac-Chr10:45582749 9.90E-307 tandem
Lac3g0147 Lac-Chr3:1017958 Lac10g3126 Lac-Chr10:45578603 1.10E-137 transposed
Lac3g2977 Lac-Chr3:47585469 Lac10g3126 Lac-Chr10:45578603 8.00E-25 transposed
Lac9g1402 Lac-Chr9:31787145 Lac10g3126 Lac-Chr10:45578603 3.80E-19 transposed
Lac1g1991 Lac-Chr1:41493945 Lac10g3126 Lac-Chr10:45578603 1.20E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85702 PF00069 Pkinase 1.60E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac10g3126 - - - 0.0