Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac11g0019 | ATGGCGCTATCGGTGAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTCGCAATCGTGGCGTTGATTTTGGTGCTCATTTGGACCATTCACTTCAGAGGCGGCCTCGCTTGGGAGGCTGTCAATAAGAACCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGCGAAGCAATAATTAGTTATAAATCACTGCCACTGAGAAAGGAAGTGAAGAAAGTGATACACATGGTGCTACACGGCGTGGCATTGATACTGGGTATTGTGGGGATCAGCGCTGCATTCAAGAACCATAATGAAAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATTGTCCTGTATGGCATCCAGTGGGTGTACGGGTTGGTGACATTCTTGTACCCAGGAGGATCATTGGATGTCCGAAGAGCGTCACTTCCATGGCACGTGGTATTGGGCATGATGATTTACATATTAGCAGTGGGCAACTCGGCGCTTGGGTTTCTAGAGAAGCTGACGTTTCTGGAGAGCTCTGGGGTCTCCAAATATGGCACTGAGGCCTTCCTCGTCAACTTCACCGCCATCACCACTCTCATTTTTGCACTCTTTGTCATTCTCTCTGTTATTTCACAACCCAAACCTCAAGACGACCACCACGCCGCTTATTCAGCTATATGA | 699 | 47.64 | MALSVKAFPFTVVSHVLAIVALILVLIWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHMVLHGVALILGIVGISAAFKNHNESGIANLYSLHSWIGIGVIVLYGIQWVYGLVTFLYPGGSLDVRRASLPWHVVLGMMIYILAVGNSALGFLEKLTFLESSGVSKYGTEAFLVNFTAITTLIFALFVILSVISQPKPQDDHHAAYSAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 190025 | 193973 | - | Lag0030657.1 | Lac11g0019 | 585877 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac11g0019 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Lac11g0019 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Lac11g0019 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Lac11g0019 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Lac11g0019 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Lac11g0019 | 232 | Gene3D | - | 2 | 227 | - | - | |
| Lac11g0019 | 232 | PANTHER | CYTOCHROME B561-RELATED | 4 | 220 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0019 | Lac-Chr11:190025 | Lac8g2802 | Lac-Chr8:45221650 | 8.90E-53 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac11g0019 | K08360 | - | csv:101209308 | 371.703 |