Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0028 | ATGGTACACCCAGAATTTGTGAAGATATTGTCGACAGAAGTGAAGGCCAAGTTCTGGGGAAAGCCATCTGTGTTCAAACGTGACAGAAAATCAATGTTCGGAAATGGTTTGGTAATGGCTGAAGGAGATGAGTGGGTTCGCCAGAGACATGTCATCACTCCTGCATTTAATCCATCCAACTTGAAGGCAATGTCAAGCTTGATGGTGGAGTCCACCACCCACATGCTGGAGAGATGGGCCAACCTCGTACTCTCCGGCCACCCACAAATCGAAGTCGAAAAAGAAATCACTTCCACCGCCGGCGAAATCATCGCCAAAACCAGCTTCGGAATCGACCACAAAAGCGGCCGACAAGTCTTCCAGAAACTCAGGGATCTCCAGATGACACTCTTCAAAACCAACCGCCTCGTCGGAGTCCCGTTCGCCGGAGTTCTCAACGCCGGCAAGGCCCGAGAGGCCAGACGCCTTGGGGAGGAGATCGACGGGCTGTTTCGGGCGGTGATCACGGCGAGGAGAGAGAATCAGGCGGTGCCGCAGCAGCATGATCTTTTGAGTTTGCTTTTGAAAGAGAGCGGCGAAGAGGGGAAGCTGGGGAGGAGGCTGAGCACGACGGAGCTGATCGACGAGTGTAAGACGTTTTTCTTTGGTGGGCATGAAACGACGGCGTTGGCTCTGACGTGGACACTGCTGCTTTTGGGCATTCATACGGAGTGGCAAACGCAGCTGAGAGAGGAGATCAAACAAGTGCTTGGTGATAAACACACTGACTTTGATTTCACTAAGCTTTCTCAACTCAGAAAGATGGGATGGGTAATGAGCGAGGTTCTACGTCTATACCCATCAGCACCAAACGTACAAAGACAAGCAAGAAGAGACATTACAATAAACGGAGTGACAATCCCGAATGGCACCAACATGTGGATCGACGTGGTGGGCATGCATCACGACCAAGCCCTTTGGGGAGACCAGGTCAACGAGTTCCACCCTGAGAGATTCCAAAACGACGCCATTGCTGGCGGCTGCAGCCACAAGATGGGCTATTTGCCATTTGGGTTTGGAGGAAGAATGTGTGTTGGAAGGCACTTGACGTTTATGGAGTATAAGATTGTGTTGACCTTGATTTTGTCTAGGTTTTCCTTCTCTTTGTCTCCTGATTACTGCCATTCGCCTTCCATTATGCTCTCCCTCCGACCTGCCCATGGCTTGCCCCTCATTTTTCAACTACTCGAGGATTAG | 1236 | 50.97 | MVHPEFVKILSTEVKAKFWGKPSVFKRDRKSMFGNGLVMAEGDEWVRQRHVITPAFNPSNLKAMSSLMVESTTHMLERWANLVLSGHPQIEVEKEITSTAGEIIAKTSFGIDHKSGRQVFQKLRDLQMTLFKTNRLVGVPFAGVLNAGKAREARRLGEEIDGLFRAVITARRENQAVPQQHDLLSLLLKESGEEGKLGRRLSTTELIDECKTFFFGGHETTALALTWTLLLLGIHTEWQTQLREEIKQVLGDKHTDFDFTKLSQLRKMGWVMSEVLRLYPSAPNVQRQARRDITINGVTIPNGTNMWIDVVGMHHDQALWGDQVNEFHPERFQNDAIAGGCSHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSPDYCHSPSIMLSLRPAHGLPLIFQLLED | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 247461 | 250005 | + | Lag0030666.1 | Lac11g0028 | 585886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0028 | 411 | PRINTS | E-class P450 group I signature | 205 | 222 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | E-class P450 group I signature | 357 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | E-class P450 group I signature | 347 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | E-class P450 group I signature | 225 | 251 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 350 | 359 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Lac11g0028 | 411 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 403 | IPR050665 | GO:0004497(PANTHER) | |
Lac11g0028 | 411 | Gene3D | Cytochrome P450 | 2 | 409 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | SUPERFAMILY | Cytochrome P450 | 6 | 406 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | Pfam | Cytochrome P450 | 3 | 388 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | P450 superfamily signature | 270 | 281 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | P450 superfamily signature | 348 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | P450 superfamily signature | 216 | 233 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac11g0028 | 411 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0028 | Lac-Chr11:247461 | Lac12g2036 | Lac-Chr12:37429546 | 3.10E-72 | dispersed | |
Lac5g2937 | Lac-Chr5:47435976 | Lac11g0028 | Lac-Chr11:247461 | 4.20E-123 | transposed | |
Lac11g0028 | Lac-Chr11:247461 | Lac5g2936 | Lac-Chr5:47431740 | 6.70E-19 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0028 | - | - | - | 0.0 |