Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0028 ATGGTACACCCAGAATTTGTGAAGATATTGTCGACAGAAGTGAAGGCCAAGTTCTGGGGAAAGCCATCTGTGTTCAAACGTGACAGAAAATCAATGTTCGGAAATGGTTTGGTAATGGCTGAAGGAGATGAGTGGGTTCGCCAGAGACATGTCATCACTCCTGCATTTAATCCATCCAACTTGAAGGCAATGTCAAGCTTGATGGTGGAGTCCACCACCCACATGCTGGAGAGATGGGCCAACCTCGTACTCTCCGGCCACCCACAAATCGAAGTCGAAAAAGAAATCACTTCCACCGCCGGCGAAATCATCGCCAAAACCAGCTTCGGAATCGACCACAAAAGCGGCCGACAAGTCTTCCAGAAACTCAGGGATCTCCAGATGACACTCTTCAAAACCAACCGCCTCGTCGGAGTCCCGTTCGCCGGAGTTCTCAACGCCGGCAAGGCCCGAGAGGCCAGACGCCTTGGGGAGGAGATCGACGGGCTGTTTCGGGCGGTGATCACGGCGAGGAGAGAGAATCAGGCGGTGCCGCAGCAGCATGATCTTTTGAGTTTGCTTTTGAAAGAGAGCGGCGAAGAGGGGAAGCTGGGGAGGAGGCTGAGCACGACGGAGCTGATCGACGAGTGTAAGACGTTTTTCTTTGGTGGGCATGAAACGACGGCGTTGGCTCTGACGTGGACACTGCTGCTTTTGGGCATTCATACGGAGTGGCAAACGCAGCTGAGAGAGGAGATCAAACAAGTGCTTGGTGATAAACACACTGACTTTGATTTCACTAAGCTTTCTCAACTCAGAAAGATGGGATGGGTAATGAGCGAGGTTCTACGTCTATACCCATCAGCACCAAACGTACAAAGACAAGCAAGAAGAGACATTACAATAAACGGAGTGACAATCCCGAATGGCACCAACATGTGGATCGACGTGGTGGGCATGCATCACGACCAAGCCCTTTGGGGAGACCAGGTCAACGAGTTCCACCCTGAGAGATTCCAAAACGACGCCATTGCTGGCGGCTGCAGCCACAAGATGGGCTATTTGCCATTTGGGTTTGGAGGAAGAATGTGTGTTGGAAGGCACTTGACGTTTATGGAGTATAAGATTGTGTTGACCTTGATTTTGTCTAGGTTTTCCTTCTCTTTGTCTCCTGATTACTGCCATTCGCCTTCCATTATGCTCTCCCTCCGACCTGCCCATGGCTTGCCCCTCATTTTTCAACTACTCGAGGATTAG 1236 50.97 MVHPEFVKILSTEVKAKFWGKPSVFKRDRKSMFGNGLVMAEGDEWVRQRHVITPAFNPSNLKAMSSLMVESTTHMLERWANLVLSGHPQIEVEKEITSTAGEIIAKTSFGIDHKSGRQVFQKLRDLQMTLFKTNRLVGVPFAGVLNAGKAREARRLGEEIDGLFRAVITARRENQAVPQQHDLLSLLLKESGEEGKLGRRLSTTELIDECKTFFFGGHETTALALTWTLLLLGIHTEWQTQLREEIKQVLGDKHTDFDFTKLSQLRKMGWVMSEVLRLYPSAPNVQRQARRDITINGVTIPNGTNMWIDVVGMHHDQALWGDQVNEFHPERFQNDAIAGGCSHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSPDYCHSPSIMLSLRPAHGLPLIFQLLED 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 247461 250005 + Lag0030666.1 Lac11g0028 585886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0028 411 PRINTS E-class P450 group I signature 205 222 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS E-class P450 group I signature 357 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS E-class P450 group I signature 347 357 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS E-class P450 group I signature 225 251 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 350 359 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g0028 411 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 403 IPR050665 GO:0004497(PANTHER)
Lac11g0028 411 Gene3D Cytochrome P450 2 409 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 SUPERFAMILY Cytochrome P450 6 406 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 Pfam Cytochrome P450 3 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS P450 superfamily signature 270 281 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS P450 superfamily signature 348 357 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS P450 superfamily signature 216 233 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0028 411 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0028 Lac-Chr11:247461 Lac12g2036 Lac-Chr12:37429546 3.10E-72 dispersed
Lac5g2937 Lac-Chr5:47435976 Lac11g0028 Lac-Chr11:247461 4.20E-123 transposed
Lac11g0028 Lac-Chr11:247461 Lac5g2936 Lac-Chr5:47431740 6.70E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0028 - - - 0.0