Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0056 ATGGGAAGTCATCCGAAAGACCAAATTTCGACCTCGTCTCATCACATGAGAATGCTACAAAAAGTCATTGGCAGCACTTTTGCTCGTCACTCTTTACTTCATAGCTATAAGAGAAGCTTTAATGGCTTTGTGGTGAAGCTGACTAACGCCGAAGCACAGAAAGTTTCAGAAAGGAAGGGCGTAATTTCAGTATTTCGAAATGGAAAAAAACAACTCCACACAACAAGGTCGTGGGACTTCATGGGTTTCTCTCAACAAGTCAGTCGAGTTCCATCGGTAGAAAGCGATATCGTCGTCGGAGTTTTTGATTCCGGCATCTGGCCGGAATCTCCCAGTTTCCAAGACCGGCGATATGGCCCCCCACCAACCAAGTGGAACGGCACTTGTGAACTCTCACCCAATTTCTCTTGCAACAATAAAATTATCGGAGCTCGATCATATCGCAGCGACGGTAAGTATCCAGTAAACGACATCCAAGGTCCAAGAGATTCAAATGGGCATGGGACGCACACAGCGTCGACGGTGGCGGGCGGGTTGGTCGGGGGAGCGAGTATGCTCGGTCTCGGCTCGGGCACAGCAAGGGGAGGAGTCCCGTCAGCGCGAATCGCCGCGTACAAAGTATGCTGGTCCGACGGTTGCCATGACGCCGACATTCTTGCTGCATTCGACGACGCCATTGCCGACGGGGTCGACATAATCTCCCTGTCTCTTGGAGGAAATGTGCCAAGAGATTACTTCAATGACTCCATAGCCATCGGAGCTTTCCATGCAATGAAGAAGGGAATCCTCACGTCCATGTCTGCTGGCAACGACGGTCCAGGACTTTTCACGATCAGAAACTTCTCGCCTTGGTCTCTGTCAGTGGCGGCCAGCACTACTGATAGGAAATTTTTGACTGGAGTTCAACTCGGAGATGGAAGAACATTCCATGGAGTCAGCATCAATACATTTGATCTAAATGGAACCCAATATCCATTGGTTTATGCCGGAGATATACCGAATGTTACCGCTGGCTTCAATCAATCCATATCCAGATTTTGCTTGGAAAACTCAGTGGACAGGGAGTTGGTGAAGGGTAAAATTGCCCTATGTGATTTTTTGGTAACTCCACAAAATATGAGTTCTTTGAAAGGTGCAATTGGGATTATAATGCAAGATAGACTTCCAAAAGATCTCACATTCCCTTTTCCCTTGCCTGCCTCTCGCTTAGGCACACAGAATGGAACTCTCATTTCTTCTTATATCAACTTAAACAGCCTTCCAACAGCTACTATATTAAAGAGCATAGAAGGAAAACATGAATCAAGCCCTTTTGTGGCATCTTTCTCTTCAAGGGGTCCAAATCCAGCAACTCTTGACATTCTCAAGCCGGATTTGACTGGTCCAGGAGTTGAAATTCTCGCAGCATGGTCTCCTATAGGTCCACCTTCAGAAGCTGAAGATGATAATAGAAAGGTTCTTTATAATATCATTTCGGGAACTTCAATGTCTTGCCCACATGCTACAGCGGTAGCTGCATATGTTAAATCGTTCCACCCTTCTTGGTCTCCTGCTGCACTCAAATCAGCACTAATGACAACGGCATTTCCTATGAGTGCTGAACTTAACCCAGATGCAGAATTCGCATATGGTTCTGGCCATATAAATCCACTAAGCGCAGTGAACCCTGGGTTGGTCTACAATGCTACTGAAATTGACTATGTACGGTTTTTATGTGGTCAAGGTTATAGCACCCAGTTGCTCCAACAAGTCTCTGAAGATAATAGTACTTGTTCTCCAAACAATTCCGACACGGTTTTCGATCTAAACTATCCTTCATTCGCTCTTTCCACATCGATCTCAACCTCAATCAGGCAAATTTACAAACGAAGAGTCACAAATGTTGGGTCAACAAATTCCACATATAAAGCTACAATTTTTGCTCCTTTAGGGCTTAATATTACAGTGAATCCTTCTATTCTTTCATTCAAGGCTTTGGGAGAAGAGCAAAACTTTGAGCTTACAATTGAAGGAAGTATTGATAGAAGCATTGCATCAGCTTCCTTGGTGTGGGATGATGGTCAACACAAAGTCAGAAGTCCTATAACATTGTTTGACGCTAATAGCTGGATTATTAATTAG 2121 44.84 MGSHPKDQISTSSHHMRMLQKVIGSTFARHSLLHSYKRSFNGFVVKLTNAEAQKVSERKGVISVFRNGKKQLHTTRSWDFMGFSQQVSRVPSVESDIVVGVFDSGIWPESPSFQDRRYGPPPTKWNGTCELSPNFSCNNKIIGARSYRSDGKYPVNDIQGPRDSNGHGTHTASTVAGGLVGGASMLGLGSGTARGGVPSARIAAYKVCWSDGCHDADILAAFDDAIADGVDIISLSLGGNVPRDYFNDSIAIGAFHAMKKGILTSMSAGNDGPGLFTIRNFSPWSLSVAASTTDRKFLTGVQLGDGRTFHGVSINTFDLNGTQYPLVYAGDIPNVTAGFNQSISRFCLENSVDRELVKGKIALCDFLVTPQNMSSLKGAIGIIMQDRLPKDLTFPFPLPASRLGTQNGTLISSYINLNSLPTATILKSIEGKHESSPFVASFSSRGPNPATLDILKPDLTGPGVEILAAWSPIGPPSEAEDDNRKVLYNIISGTSMSCPHATAVAAYVKSFHPSWSPAALKSALMTTAFPMSAELNPDAEFAYGSGHINPLSAVNPGLVYNATEIDYVRFLCGQGYSTQLLQQVSEDNSTCSPNNSDTVFDLNYPSFALSTSISTSIRQIYKRRVTNVGSTNSTYKATIFAPLGLNITVNPSILSFKALGEEQNFELTIEGSIDRSIASASLVWDDGQHKVRSPITLFDANSWIIN 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 465701 469060 - Lag0030694.1 Lac11g0056 585914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0056 706 CDD Peptidases_S8_3 70 528 IPR034197 -
Lac11g0056 706 Gene3D Peptidase S8/S53 domain 96 567 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac11g0056 706 Pfam Fibronectin type-III domain 601 696 IPR041469 -
Lac11g0056 706 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Lac11g0056 706 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Lac11g0056 706 PRINTS Subtilisin serine protease family (S8) signature 163 176 IPR015500 -
Lac11g0056 706 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Lac11g0056 706 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Lac11g0056 706 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 695 IPR045051 -
Lac11g0056 706 Gene3D - 571 698 - -
Lac11g0056 706 SUPERFAMILY Subtilisin-like 72 558 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac11g0056 706 ProSiteProfiles Serine proteases, subtilase domain profile. 77 554 - -
Lac11g0056 706 Pfam Peptidase inhibitor I9 8 73 IPR010259 -
Lac11g0056 706 FunFam Subtilisin-like protease SBT1.5 96 307 - -
Lac11g0056 706 CDD PA_subtilisin_like 301 425 - -
Lac11g0056 706 Pfam Subtilase family 95 544 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac11g0056 706 Gene3D - 294 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0056 Lac-Chr11:465701 Lac2g2679 Lac-Chr2:41234342 4.00E-290 dispersed
Lac13g1041 Lac-Chr13:8859875 Lac11g0056 Lac-Chr11:465701 9.10E-65 dispersed
Lac11g0056 Lac-Chr11:465701 Lac11g0057 Lac-Chr11:471951 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0056 - - - 0.0