Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0057 ATGAGAATGCTACAAGAAGCGATTGGCAGTACTTTTGCTCCACGCTCTTTACTCCATAGCTATAAGAGAAGTTTTAATGGCTTTGTCGTGAGGCTAACCGAAGTCGAAGCACAGAAAGTTTCGGAAATGAAGGGTGTAATCTCAGTTTTCCCAAATGAAAGAAAACAACTCCACACAACAAGATCATGGGACTTCATGGGTTTGTCTCAACAAGCTAGTCGAGTTCCATATGTGGAAAGTGATATCATCGTTGGAGTACTCGACTCTGGCATTTGGCCGGAATCCCCCAGTTTCCTCGACCAAGGATACGGCCCGCCGCCGTCCAAGTGGAAGGGTACTTGTGAAGTCTCACCCAATTTCTCTTGCAACAATAAAATCATTGGAGCTCGATCATATCGTAGCGATGGTTTGTATCCAACAAGTGATATTCGCGGTCCAAGAGATTCAGATGGCCATGGCACGCACACGGCATCGACCGTGGCGGGCGGGTTGGTCGGGGGAGCGAGTATGGTTGGTCTCGGCTCCGGCACGGCAAGGGGTGGAGTCCCATCGGCACGAATCGCGGCGTACAAAGTATGTTGGTCGGATGGTTGCTATGATGCCGATATTCTTGCTGCATTCGACGACGCCATTGCTGATGGGGTTGACATCATCTCTTTCTCCATTGGAGCATTCGTGACTCGAGATTACTTCAATGACTCCATGGCCATTGGAGCTTTCCATGCAATGAAGAATGGAATCCTTACGTCAATGTCCGCTGGCAACGACGGTCCAACACCTTTCACAATTAAAAACTTCTCACCATGGTCTCTATCGGTCGCGGCTAGCACTACCGATAGGAAATTTTTGACTCCAGTTCAACTCGGAGATGGAACAAGTTTCAATGGAGTCTCCATCAATACATTTGATCTAAATGGAACACAATATCCGTTGGTATATGCTGGAAATGTACCAAATGTAACCGCTGGCTTCGTTGGATCCATGTCAAGATTTTGCAGGGAGAACTCAGTGGATAGGGAGTTGGTGAAGGGTAAAATTGTCCTATGTGATGGTTTTGTACCAAGAAATGTGGGTTCTTTAAAGGGTGCAATTGGAATTATAATGCAGGACACAACTCCAAAAGATCTCACATTCTCTTTTCCCTGGCCTGCCTCCCACCTTGGCCCACAAGAAAGACATCTCATTTCTTCTTATATCAACTTAAATAGTCTTCCAACAGCAACTATATTAAAAAGCATACAAGGGAAGCATGAATTATCCCCTTTTGTTGCTTCTTTCTCTTCAAGGGGTCCAAATCCAATAACTCCCAACATTCTTAAGCCAGACTTGACTGGTCCAGGAGTTGAAATTCTTGCTGCATGGTCTCCTATAGCTCCACCATCGGGAGATGAATATGACAATAGAAATATCTCTTTCAATATCATTTCAGGGACTTCAATGTCTTGCCCACATGCTACGGCAGCTGCTGCATATGTTAAATCATTTCATCCTTCTTGGTCTCCTGCTGCACTTAAATCAGCACTTATGACGACTGCATTTCCTATGAGAGCTGAACTTAACACAGATGCAGAATTCGCATATGGTTCTGGCCATATAAACCCACTAAGTGCAGTGAACCCTGGATTGGTCTACAATGCTACTGAAATTGACTATGTACGGTTTCTATGCGGTCAAGGTTCTAGCACCAAGTTGCTCCAGCAAGTCTCTGGAGATAATAGTACTTGTTCTCCAGACAATTCCGACACGGTTTTTGATCTAAACTATCCTTCATTCGCTCTTTCCACATCGATCTCAACCTCAATCAGGAAAATTTACAAAAGAAGGGTCACAAATGTTGGGTCAACAAACTCAACATATAAAGCTACAATTTTTGCTCCTTTAGGGCTTAATATTAAAGTGAGTCCTTCTATTCTTTCATTCAAGGCTTTGGGAGAAGAGCAAAACTTTGAGCTTACAATTGAAGGAAGTATTGATAGAAGCATTGCATCAGCTTCCTTGGTGTGGGATGATGGTCAACACAAAGTTAGGAGTCCTATAACAGTCTTTGATGCTAATATGTTGGTTAATTAG 2070 43.91 MRMLQEAIGSTFAPRSLLHSYKRSFNGFVVRLTEVEAQKVSEMKGVISVFPNERKQLHTTRSWDFMGLSQQASRVPYVESDIIVGVLDSGIWPESPSFLDQGYGPPPSKWKGTCEVSPNFSCNNKIIGARSYRSDGLYPTSDIRGPRDSDGHGTHTASTVAGGLVGGASMVGLGSGTARGGVPSARIAAYKVCWSDGCYDADILAAFDDAIADGVDIISFSIGAFVTRDYFNDSMAIGAFHAMKNGILTSMSAGNDGPTPFTIKNFSPWSLSVAASTTDRKFLTPVQLGDGTSFNGVSINTFDLNGTQYPLVYAGNVPNVTAGFVGSMSRFCRENSVDRELVKGKIVLCDGFVPRNVGSLKGAIGIIMQDTTPKDLTFSFPWPASHLGPQERHLISSYINLNSLPTATILKSIQGKHELSPFVASFSSRGPNPITPNILKPDLTGPGVEILAAWSPIAPPSGDEYDNRNISFNIISGTSMSCPHATAAAAYVKSFHPSWSPAALKSALMTTAFPMRAELNTDAEFAYGSGHINPLSAVNPGLVYNATEIDYVRFLCGQGSSTKLLQQVSGDNSTCSPDNSDTVFDLNYPSFALSTSISTSIRKIYKRRVTNVGSTNSTYKATIFAPLGLNIKVSPSILSFKALGEEQNFELTIEGSIDRSIASASLVWDDGQHKVRSPITVFDANMLVN 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 471951 475396 - Lag0030695.1 Lac11g0057 585915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0057 689 ProSiteProfiles Serine proteases, subtilase domain profile. 62 538 - -
Lac11g0057 689 Pfam Subtilase family 80 528 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac11g0057 689 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 679 IPR045051 -
Lac11g0057 689 PRINTS Subtilisin serine protease family (S8) signature 148 161 IPR015500 -
Lac11g0057 689 PRINTS Subtilisin serine protease family (S8) signature 476 492 IPR015500 -
Lac11g0057 689 PRINTS Subtilisin serine protease family (S8) signature 79 98 IPR015500 -
Lac11g0057 689 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 58 IPR037045 -
Lac11g0057 689 Gene3D - 279 416 - -
Lac11g0057 689 Gene3D - 555 683 - -
Lac11g0057 689 CDD PA_subtilisin_like 286 409 - -
Lac11g0057 689 Gene3D Peptidase S8/S53 domain 81 551 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac11g0057 689 FunFam Subtilisin-like protease SBT1.5 81 293 - -
Lac11g0057 689 Pfam Fibronectin type-III domain 585 681 IPR041469 -
Lac11g0057 689 CDD Peptidases_S8_3 55 512 IPR034197 -
Lac11g0057 689 ProSitePatterns Serine proteases, subtilase family, serine active site. 477 487 IPR023828 -
Lac11g0057 689 Pfam Peptidase inhibitor I9 11 58 IPR010259 -
Lac11g0057 689 SUPERFAMILY Subtilisin-like 62 539 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0057 Lac-Chr11:471951 Lac2g2679 Lac-Chr2:41234342 1.10E-271 dispersed
Lac11g0056 Lac-Chr11:465701 Lac11g0057 Lac-Chr11:471951 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0057 - - - 0.0