Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac11g0113 | ATGTGGACTCTTCTCATAATTGTCTCTCTCTTCTTCTCCTTTCTTGTGAAGCTATTTCTTTTCCCCTCTCGGTGTGGCCCTTACAAGCTCCCTCCGGGGCCACCCACCTTCCCAATTCTCACAAACTTCCTATTGCTCCGATGGTCGCCCCTTGAGCTCAAGCCTATGCTGCGTAGCTTCATGGCTAAATACGGCCCCATCATCACCATCAACGTCGGCCCGTCCCCGGCCATCTTCATCGCCGACCGCTCCATCGCCTACAAGGCCCTCGTCCAAAACGGCGCCATCTTCGCCGACCGTCCCCCGTTCCTCGCTATCAACAAGATTACTGCCTTGTCTCCCAACCCCCACAACATCACCTCCGCTCCTTATGGCCCCACATGGTGTCTCCTCCGTCGCAATCTCGCGGCGGAGATGCTCCACCCTTTGCGAGTCAGGGCTTATTCGCAGGCTCGCAAGTGGGTTCTAGACATTCTTGTTACTCGCCTTGTGTCTCGATCTGGATCGGGAGCTTATGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGGGACAAGCTGAATGAGACAGAGATCTTGGAAATTCAACAAGTGCAGCGTGAGATTTTGGTGGATCTTCAGCGTTTTGTTATACTCAATTTCTGGCCTAAGTTGATGAAGATTTTGCTTCGAAAGCGTTGGAAGGCTTACTTACAACTCAAAAGCAAGCAAGAAAAGCTAACCCACGACAATAGAAAGCTCAAGCTTGAAAATGAAGAAATTGTGAATTTATGCTCAGAGTTCCTCAACGCCGGGACCGACACCACTGCCACAACCTTGCAGTGGATAATGGCAAACTTGGTGAAATACCCAAAAATCCAACATAAACTTTTTGAAGAGATCAAAGGAGTCATGATAACAACACAACACAGAGGAAGTAAAGGAAGAAGTTTTGGGAAGCTTCCGTATTTGAAAGCAGTGATTCTAGAAGGATTACGAAGGCACCCGCCAGGGCATTTCATAGTACCACATGCAGTGAAAGAAGATACAATGTTGGAGAATTATTTTATTCCCAAAAATGGAACGGTGAATATCCTGGCCGTGGAGATGGGGTGGGATCCAGAAGTATGGGAGGATCCGATGGCATTTAAGCCGGAGAGGTTCGTCAGCGGTGACGGAGAGGCGACGACGACGACGACGACGGCGTTTGATGTAACATGTAGCAAGGAGATTAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGTCCAGGGGCTGGTTTGGCAATGCTTCATTTGGAATATTTTGTTGCAAATTTGGTTTGGCGATTTGAGTGGAAGGCTGTGGAAGGAGATGAGATTGATTTATCAGAGAAGATGGAATTCACTATTGTGATGAAGAAGCCTCTCAAAGCTCATATACATCCAAGGTTTTGA | 1440 | 47.64 | MWTLLIIVSLFFSFLVKLFLFPSRCGPYKLPPGPPTFPILTNFLLLRWSPLELKPMLRSFMAKYGPIITINVGPSPAIFIADRSIAYKALVQNGAIFADRPPFLAINKITALSPNPHNITSAPYGPTWCLLRRNLAAEMLHPLRVRAYSQARKWVLDILVTRLVSRSGSGAYVVVEHFQFAMFCLLVLMCFGDKLNETEILEIQQVQREILVDLQRFVILNFWPKLMKILLRKRWKAYLQLKSKQEKLTHDNRKLKLENEEIVNLCSEFLNAGTDTTATTLQWIMANLVKYPKIQHKLFEEIKGVMITTQHRGSKGRSFGKLPYLKAVILEGLRRHPPGHFIVPHAVKEDTMLENYFIPKNGTVNILAVEMGWDPEVWEDPMAFKPERFVSGDGEATTTTTTAFDVTCSKEIKMMPFGAGRRICPGAGLAMLHLEYFVANLVWRFEWKAVEGDEIDLSEKMEFTIVMKKPLKAHIHPRF | 479 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1035016 | 1038527 | - | Lag0030751.1 | Lac11g0113 | 585971 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac11g0113 | 479 | CDD | CYP77_89 | 63 | 472 | - | - | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 414 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 261 | 278 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 281 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 326 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | E-class P450 group I signature | 424 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 417 | 426 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac11g0113 | 479 | SUPERFAMILY | Cytochrome P450 | 31 | 478 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | P450 superfamily signature | 272 | 289 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | P450 superfamily signature | 327 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | P450 superfamily signature | 424 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PRINTS | P450 superfamily signature | 415 | 424 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | Coils | Coil | 238 | 258 | - | - | |
| Lac11g0113 | 479 | Gene3D | Cytochrome P450 | 27 | 479 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 12 | 477 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lac11g0113 | 479 | Pfam | Cytochrome P450 | 250 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0113 | 479 | Pfam | Cytochrome P450 | 31 | 249 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0113 | Lac-Chr11:1035016 | Lac9g1469 | Lac-Chr9:33061015 | 2.50E-174 | dispersed | |
| Lac11g0113 | Lac-Chr11:1035016 | Lac11g0114 | Lac-Chr11:1045128 | 6.20E-226 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac11g0113 | K24184 | - | csv:101218555 | 689.493 |