Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0113 ATGTGGACTCTTCTCATAATTGTCTCTCTCTTCTTCTCCTTTCTTGTGAAGCTATTTCTTTTCCCCTCTCGGTGTGGCCCTTACAAGCTCCCTCCGGGGCCACCCACCTTCCCAATTCTCACAAACTTCCTATTGCTCCGATGGTCGCCCCTTGAGCTCAAGCCTATGCTGCGTAGCTTCATGGCTAAATACGGCCCCATCATCACCATCAACGTCGGCCCGTCCCCGGCCATCTTCATCGCCGACCGCTCCATCGCCTACAAGGCCCTCGTCCAAAACGGCGCCATCTTCGCCGACCGTCCCCCGTTCCTCGCTATCAACAAGATTACTGCCTTGTCTCCCAACCCCCACAACATCACCTCCGCTCCTTATGGCCCCACATGGTGTCTCCTCCGTCGCAATCTCGCGGCGGAGATGCTCCACCCTTTGCGAGTCAGGGCTTATTCGCAGGCTCGCAAGTGGGTTCTAGACATTCTTGTTACTCGCCTTGTGTCTCGATCTGGATCGGGAGCTTATGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGGGACAAGCTGAATGAGACAGAGATCTTGGAAATTCAACAAGTGCAGCGTGAGATTTTGGTGGATCTTCAGCGTTTTGTTATACTCAATTTCTGGCCTAAGTTGATGAAGATTTTGCTTCGAAAGCGTTGGAAGGCTTACTTACAACTCAAAAGCAAGCAAGAAAAGCTAACCCACGACAATAGAAAGCTCAAGCTTGAAAATGAAGAAATTGTGAATTTATGCTCAGAGTTCCTCAACGCCGGGACCGACACCACTGCCACAACCTTGCAGTGGATAATGGCAAACTTGGTGAAATACCCAAAAATCCAACATAAACTTTTTGAAGAGATCAAAGGAGTCATGATAACAACACAACACAGAGGAAGTAAAGGAAGAAGTTTTGGGAAGCTTCCGTATTTGAAAGCAGTGATTCTAGAAGGATTACGAAGGCACCCGCCAGGGCATTTCATAGTACCACATGCAGTGAAAGAAGATACAATGTTGGAGAATTATTTTATTCCCAAAAATGGAACGGTGAATATCCTGGCCGTGGAGATGGGGTGGGATCCAGAAGTATGGGAGGATCCGATGGCATTTAAGCCGGAGAGGTTCGTCAGCGGTGACGGAGAGGCGACGACGACGACGACGACGGCGTTTGATGTAACATGTAGCAAGGAGATTAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGTCCAGGGGCTGGTTTGGCAATGCTTCATTTGGAATATTTTGTTGCAAATTTGGTTTGGCGATTTGAGTGGAAGGCTGTGGAAGGAGATGAGATTGATTTATCAGAGAAGATGGAATTCACTATTGTGATGAAGAAGCCTCTCAAAGCTCATATACATCCAAGGTTTTGA 1440 47.64 MWTLLIIVSLFFSFLVKLFLFPSRCGPYKLPPGPPTFPILTNFLLLRWSPLELKPMLRSFMAKYGPIITINVGPSPAIFIADRSIAYKALVQNGAIFADRPPFLAINKITALSPNPHNITSAPYGPTWCLLRRNLAAEMLHPLRVRAYSQARKWVLDILVTRLVSRSGSGAYVVVEHFQFAMFCLLVLMCFGDKLNETEILEIQQVQREILVDLQRFVILNFWPKLMKILLRKRWKAYLQLKSKQEKLTHDNRKLKLENEEIVNLCSEFLNAGTDTTATTLQWIMANLVKYPKIQHKLFEEIKGVMITTQHRGSKGRSFGKLPYLKAVILEGLRRHPPGHFIVPHAVKEDTMLENYFIPKNGTVNILAVEMGWDPEVWEDPMAFKPERFVSGDGEATTTTTTAFDVTCSKEIKMMPFGAGRRICPGAGLAMLHLEYFVANLVWRFEWKAVEGDEIDLSEKMEFTIVMKKPLKAHIHPRF 479
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 1035016 1038527 - Lag0030751.1 Lac11g0113 585971
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0113 479 CDD CYP77_89 63 472 - -
Lac11g0113 479 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g0113 479 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 Coils Coil 238 258 - -
Lac11g0113 479 Gene3D Cytochrome P450 27 479 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 477 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lac11g0113 479 Pfam Cytochrome P450 250 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0113 479 Pfam Cytochrome P450 31 249 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0113 Lac-Chr11:1035016 Lac9g1469 Lac-Chr9:33061015 2.50E-174 dispersed
Lac11g0113 Lac-Chr11:1035016 Lac11g0114 Lac-Chr11:1045128 6.20E-226 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0113 K24184 - csv:101218555 689.493