Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac11g0114 | ATGAATTGGATTCTTCTCTTAATTGTCTCTCTCTTCCTCTCTTTTCTTGTGAAGTTATTTCTTTTCCCCTCTCGGCGTGGCCTTTACAAGCTCCCTCCGGGGCCACCCACATTCCCAATTCTCTCAAACTTCCTATGGCTCCGCCAGTCGCCCCTTGACTTCGAATCTGTGCTGCGCAGTTTCATTGCCAAATATGGTCCCATCATCACCCTCCACATCGGCCCGTCGCCGACCATCGTAATCTCCGACCGCTCCATTGCCCACAAGGCCCTCGTCCAAAACGGCGCCATCTTTGCCGACCGTCCCCAGGTCCTTGCCATCAACAGGATTGCCACCACCGGCAGCTGCCTCAACAATATCACTTCCGCCCCTTATGGCTCTACTTGGCGCCTCCTCCGCCGCAATCTCGCAGCGGAGATGCTCCACCCTTCTCGGGTCCGAGCTTATTCTCGGGCCCGCAGGTGGGTTTTAGACATTCTTGTTACTCGCCTTTTGTCTCGATCTGGATCGGGAGCTTATGTTGTTGTTGAGCATTTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGCTTTGGGGACAAGCTGAATGAGACAGAGATCTTGGAAATTCAACAAGTGCAGCGTGAGATTTTGGTGAATCTTCAGCGTTTTGTTATACTCAATTTCTGGCCTAAGTTGATGAAGGTTTTGCTTCGGAAGCGTTGGAAGGCTTACTTACAACTCAAAAGCAGGCAAGAAAAGGTTAACTTTCCTATACTTGAATTCAAAATCTTAAAGCTCATAAGTCCTCATCCCATTTATCAAGGCACGAGAGAAGGCCAAACAAGAAACAGCAAAAAACATCGAGAAGAAAAAGAAGAATTTGTAGTATCATATGTGGATACTCTACTCGATTTGCACCTTATCGATGAAAATAGAAAGCTTAAAAATGAAGAAATGGTGAGTTTATGCTCGGAGTTCCTCGACGCCGGGACCGACACCACTGCCACAACTTTGCAGTGGATAATGGCGAACTTAGTAAAGTACCCACACATCCAACAAAAACTATTCGAAGAGATCAAACGTGTCGTGGGATCCAACACAAAACAACATGGGTTACGGGAAGAGGAAGTGAAGGAAGAAGATTTGGGGAAGCTTCCATATCTGAAAGCCGTGGTTCTAGAAGGATTACGAAGGCACCCGCCGGGGCATTTCATGTTACCACATGCAGTGAAAGAAGATACGATGTTGGAGAATTATTTCGTACCGAAAAATGGGACGGTGAATATCATGGCAGTGGAGATGGGGTGGGATCCGGAAGTATGGGAGGATCCAATGGCGTTTAAGCCGGAGAGGTTCGTGAGCAGCGACGGAGACGCGGCGACGACAACTACCACATTTGATGTAACATGTAGCAAGGAGATCAAGATGATGCCGTTTGGAGCAGGAAGGAGGATATGTCCAGGGGCTGGTTTGGCAATGCTTCATTTGGAATATTTTGTTGCAAATTTGGTTTGGCGATTTGAGTGGAAGGCTGTGGAAGGAGATGAGATTGATTTATCAGAGAAGATGGAATTCACCATTGTCATGAAGAACCCTCTCAAAGCCCATATACATCCAAGGTTTTAG | 1611 | 46.93 | MNWILLLIVSLFLSFLVKLFLFPSRRGLYKLPPGPPTFPILSNFLWLRQSPLDFESVLRSFIAKYGPIITLHIGPSPTIVISDRSIAHKALVQNGAIFADRPQVLAINRIATTGSCLNNITSAPYGSTWRLLRRNLAAEMLHPSRVRAYSRARRWVLDILVTRLLSRSGSGAYVVVEHFQFAMFCLLVLMCFGDKLNETEILEIQQVQREILVNLQRFVILNFWPKLMKVLLRKRWKAYLQLKSRQEKVNFPILEFKILKLISPHPIYQGTREGQTRNSKKHREEKEEFVVSYVDTLLDLHLIDENRKLKNEEMVSLCSEFLDAGTDTTATTLQWIMANLVKYPHIQQKLFEEIKRVVGSNTKQHGLREEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFMLPHAVKEDTMLENYFVPKNGTVNIMAVEMGWDPEVWEDPMAFKPERFVSSDGDAATTTTTFDVTCSKEIKMMPFGAGRRICPGAGLAMLHLEYFVANLVWRFEWKAVEGDEIDLSEKMEFTIVMKNPLKAHIHPRF | 536 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1045128 | 1047878 | - | Lag0030752.1 | Lac11g0114 | 585972 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac11g0114 | 536 | FunFam | Cytochrome P450 family protein | 26 | 536 | - | - | |
| Lac11g0114 | 536 | SUPERFAMILY | Cytochrome P450 | 32 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 313 | 330 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 333 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | E-class P450 group I signature | 384 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 474 | 483 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac11g0114 | 536 | Gene3D | Cytochrome P450 | 25 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | P450 superfamily signature | 481 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | P450 superfamily signature | 472 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | PRINTS | P450 superfamily signature | 324 | 341 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0114 | 536 | CDD | CYP77_89 | 64 | 529 | - | - | |
| Lac11g0114 | 536 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 13 | 534 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lac11g0114 | 536 | Pfam | Cytochrome P450 | 32 | 527 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0114 | Lac-Chr11:1045128 | Lac9g1469 | Lac-Chr9:33061015 | 2.90E-192 | dispersed | |
| Lac7g1926 | Lac-Chr7:29132811 | Lac11g0114 | Lac-Chr11:1045128 | 4.30E-12 | dispersed | |
| Lac11g0113 | Lac-Chr11:1035016 | Lac11g0114 | Lac-Chr11:1045128 | 6.20E-226 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac11g0114 | K24184 | - | csv:101218555 | 768.074 |