Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac11g0177 | ATGGCGATTGTGATTTTTCTAACAACGCTTTTAGTGATTTTTGTTTCATCACTTGCAAAGATTGCATATGATACTCTCTCATGCTACTGGCTGACCCCTAGGAGGATCAGGAAGGCGATGGCAAAGCAAGGCGTTCGCGGCCCTGAGCCCCGGCCGCTCATCGGAAACATCCTCGATGTAGCGGCGCTCGTGGCGAAATCCACCGCAGCCGACATGAGCTCGATCGATCACGACATCGTCGATCGCCTGCTGCCCCATTACACTGCGTGGACAAAGCAATATGGAAAGAGGTTCATTTACTGGAACGGGACGGAGCCGAGACTGTGCTTGACGGAGACGGAATTGATAAAAGAACTATTGGCAAAAAACAGCAGTGTGTGTGGGAAATCGTGGCTGCAAAGACAGGGAACCAAACACTTCATAGGGAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCATCAACGTCACATCGTTGCACCTGCCTTTATGGGGGACAAGCTCAAGAGCTATGCGGGGTACATGGTGGAATGCACTAAGAAAATGATGGAATCATTAGAGAGCGAGTTGGACTCGGGCCGGACCGAGTTCGAAATCGCCGATTACATGAAGCGACTCACCGCCGACATCATTTCTCGGACTGAGTTCGACACCAACTCCGACAAAGGCAAACAAATCTTCCATATGGTCACTCTTCTTCAGCGCCTCTGCGCCCAAGCCAGCCGCCACCTCTGCTTCCCCGGTAGCCGGTTTTTTCCAAGTAAATACAACAGAGAAATAAAGTCACTAAAAATGGAGGTGGAGAGGTTGTTAATGGAGATCATTCAAAGCAGAAAAGATGGTGTGGAGATTGGAAGAAGCACTTGCTATGGAAGTGATTTGTTGGGGATGCTGTTGAACGAGATGCAAAAGAAGAGAGAAGATGGATTCAGCTTGAACTTGCAGCTGATAATGGATGAATGCAAGACTTTCTTCTTTGCTGGCCATGAAACCACTGCTCTTTTGCTCACTTGGACCATCATGTTGCTCGCCACTAACCCTAATTGGCAACACAAGGTTCGTGATGAACTCAACCAAGTTTGCAATGGTGGAACCCCTCCCTCTGTTGAGCATCTCTCCAAGCTCACCTTGTTAAACATGGTGATAAACGAATCCCTGAGGCTTTACCCACCGGCGACGGTGCTTCCTAGAATGGCATTCGAGGACATAAAGCTAGGAGACTTAGAGATCCCAAAAGGGCTATCGATATGGATCCCGGTGCTCGCGATTCATCACAGCGAAGAGTTATGGGGAAAAGATGCAAACGAGTTCAAACCAGAACGATTTGCCACAAAGCCATTCAGTGGGGGACGTTTCATTCCATTTGCAGCTGGACCAAGAAACTGCATTGGGCAAGCTTTTGCAATGATGGAAGCTAAGATCATCTTGGCTATGTTACTCTCAAAGTTTAGCTTCACTATTTCGGATTCTTATCGCCATGCTCCTGTTGTTGTCCTCACCATACAGCCTAAGTATGGAGTTCAAGTTTGTTTGACCCCATTGAATAATTCTTGA | 1557 | 47.66 | MAIVIFLTTLLVIFVSSLAKIAYDTLSCYWLTPRRIRKAMAKQGVRGPEPRPLIGNILDVAALVAKSTAADMSSIDHDIVDRLLPHYTAWTKQYGKRFIYWNGTEPRLCLTETELIKELLAKNSSVCGKSWLQRQGTKHFIGKGLLMANGEDWYHQRHIVAPAFMGDKLKSYAGYMVECTKKMMESLESELDSGRTEFEIADYMKRLTADIISRTEFDTNSDKGKQIFHMVTLLQRLCAQASRHLCFPGSRFFPSKYNREIKSLKMEVERLLMEIIQSRKDGVEIGRSTCYGSDLLGMLLNEMQKKREDGFSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPNWQHKVRDELNQVCNGGTPPSVEHLSKLTLLNMVINESLRLYPPATVLPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFKPERFATKPFSGGRFIPFAAGPRNCIGQAFAMMEAKIILAMLLSKFSFTISDSYRHAPVVVLTIQPKYGVQVCLTPLNNS | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1671895 | 1677014 | - | Lag0030815.1 | Lac11g0177 | 586035 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac11g0177 | 518 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 7 | 508 | IPR050665 | GO:0004497(PANTHER) | |
| Lac11g0177 | 518 | Coils | Coil | 261 | 281 | - | - | |
| Lac11g0177 | 518 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | PRINTS | E-class P450 group I signature | 421 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | Coils | Coil | 177 | 197 | - | - | |
| Lac11g0177 | 518 | Pfam | Cytochrome P450 | 87 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | SUPERFAMILY | Cytochrome P450 | 47 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | Gene3D | Cytochrome P450 | 29 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0177 | 518 | CDD | CYP72_clan | 84 | 509 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac11g0177 | Lac-Chr11:1671895 | Lac2g0225 | Lac-Chr2:1727760 | 1.10E-106 | dispersed | |
| Lac1g2210 | Lac-Chr1:43514208 | Lac11g0177 | Lac-Chr11:1671895 | 1.70E-33 | transposed | |
| Lac11g0177 | Lac-Chr11:1671895 | Lac8g2821 | Lac-Chr8:45447759 | 4.50E-238 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac11g0177 | K10717 | - | csv:101213604 | 951.044 |