Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0190 ATGGCGGCTTCGGCTGACCGGCTCCGCCCTGTCGTGAAGCTTTCCGGCCCGGCGACTCGTTTTCACGACGATTCGGCGGAGACCCAGCCTCTGCTTTCGAGGGTATTGAGTTATCCGATTGGGACTATTCACCACCATTTGCGCCGCCGTCTCGGTGCCGTGAAGCCCGAAGCGCCTCGGCGACGGCAGTCTTTTGGTCGAGAATTCGGGCATGCTGCTGCGGAAACCGTTCTTGTTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGGTCGTAAGATTAACTGCACTTGCAGTGTATGCCATTCTTCTTATGCCTGGTTTTCTTCAAGTTATGTATGACTATTACTTCTCAAGTCACGTTCGAAGGGATATTATTTATGGAAATCAACCGAGAAATAGCTTGGATTTGTATTTACCTTCAAATACGGATAAAAAAAAACCAGTTGTGATATTTGTTAGCGGTGGAGCTTGGATTATTGGATATAAGGCATGGGGAGCTCTTTTAGGACTGCAGTTGGCAGAGAGAGACATCATTGTGGCCTCAATTGACTATAGAAACTTCCCTCAGGGTACAATTAGCGACATGGTGAAAGATGTTTCTCAAGGGATTTCATTTGTCTGCAAGAATATAGCAGATTATGGAGGAGATCAGGACAGAATCTTTCTGATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAGTCAAAGCTGAAAAGGGCGAGAGTGTAGATTGGAGTGTCTCCCAAATAAAGTCTTATTTTGGTTTATCTGGAGGTTATAACTTATTGAACCTAGTTGATCACTTCGATAGTCGGGGTCTATATCGTTCCGTCTTTTTGAGCATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCTGAAATAAGAATCCGAGATCCTAGCATTAGAGATGTTGTATCCAGCTTACCTCCTTTTGTTCTTTTCCATGGTACTGGTGATTATTCAATCCCATCAGATGCCAGTGAAACTTTTGTGGAGACACTTCGACAAGCTGGGGCGCAAGCTGACCTATTTCTCTATGAGGGAAAAACTCATACAGATGTGTTCCTTCAGGATCCGTTTCGGGGAGGCAGTTACGAACTTTTCGATCAAATAGTTGCCATATTACATGCAGGCGACGAGGAAGCTCTTGCAAAGGATTCTATGGCACCGCCGAAACCGCGCCTTGTTCCAGAGATTTTGATTATATTGGCACGTATGGTTAGCCCTTTCTGA 1278 45.93 MAASADRLRPVVKLSGPATRFHDDSAETQPLLSRVLSYPIGTIHHHLRRRLGAVKPEAPRRRQSFGREFGHAAAETVLVTRLSFTLLRSLGVGYRWVVRLTALAVYAILLMPGFLQVMYDYYFSSHVRRDIIYGNQPRNSLDLYLPSNTDKKKPVVIFVSGGAWIIGYKAWGALLGLQLAERDIIVASIDYRNFPQGTISDMVKDVSQGISFVCKNIADYGGDQDRIFLMGQSAGAHISVCALLEQAVKAEKGESVDWSVSQIKSYFGLSGGYNLLNLVDHFDSRGLYRSVFLSIMEGEESLSQFSPEIRIRDPSIRDVVSSLPPFVLFHGTGDYSIPSDASETFVETLRQAGAQADLFLYEGKTHTDVFLQDPFRGGSYELFDQIVAILHAGDEEALAKDSMAPPKPRLVPEILIILARMVSPF 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1792216 1799648 + Lag0030828.1 Lac11g0190 586048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0190 425 Pfam BD-FAE 141 349 IPR049492 -
Lac11g0190 425 Gene3D alpha/beta hydrolase 120 373 IPR029058 -
Lac11g0190 425 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 374 - -
Lac11g0190 425 SUPERFAMILY alpha/beta-Hydrolases 104 387 IPR029058 -
Lac11g0190 425 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 39 390 IPR050300 GO:0016298(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0190 Lac-Chr11:1792216 Lac8g1175 Lac-Chr8:25026730 1.10E-72 dispersed
Lac11g0190 Lac-Chr11:1792216 Lac13g0443 Lac-Chr13:3163935 2.40E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0190 K15889 - csv:101206540 625.165