Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0205 | ATGGCGACACTAATGTCGGGCTCCAGAATTCAGCCAGCAGCTTCTGTTCTTTCCTCCTCCATCAAGCATCTGGGTTTTAGTTCCTACGTTCGTTCCAATTGCTCGCTTTCTCCTTTTCACCATTCCTCCCTGTGCTTCAGGCGCTCTGGACCCAGACGAACTCTCTCTGTTTCCATGTCGGTTGGCCCTCTTGAAACCTGCGTCAAAGCTTCCATTACGGTGCCCAACAGGCTCGGCGACTGCCCTTTTTGCCAAAGGGTATTACTGACTTTGGAGGAAAAGCATCTACCCTATGACCTAAAGTTGGTAGACCTGTCAAACAAACCAGAATGGTTCTTAAAAATAAATTCGGAGGGTAAAGTTCCTGTGATTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATGTTATAACTCAAACACTGGAAGAGAAGTACCCAAATCCACCTTTGGCGACCCCTCCTGATAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGCTTTTCTAAAGAGCAAGGATCCAAATGATGGAACAGAACAAGCATTACTCAGCGAGCTAAGTTCTTTCAATGATCACATCAAAGAGAATGGCCCTTTTATCAATGGGAAGGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTATAAGAACTGGTCTGTTCCAGACAGCCTACCCTACGTTAAGTCTTACATGAAGAGCATATTCTCAAGAGAGTCATTTGCAAAAACTCGTGCGCTGCCTGAGGATGTTATTGCTGGTTGGCGTCCAAAGAATGATCTCGACCGTGTCTTAAAGTATAAAGCAGAAGCGACTTGCATAGTTGAATTGGTTAAAACGACGTCAATCTTTGCACTTCCATCTCTTGTTTTCTAG | 912 | 44.08 | MATLMSGSRIQPAASVLSSSIKHLGFSSYVRSNCSLSPFHHSSLCFRRSGPRRTLSVSMSVGPLETCVKASITVPNRLGDCPFCQRVLLTLEEKHLPYDLKLVDLSNKPEWFLKINSEGKVPVIKFDEQWVADSDVITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELSSFNDHIKENGPFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFAKTRALPEDVIAGWRPKNDLDRVLKYKAEATCIVELVKTTSIFALPSLVF | 303 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1994550 | 1999516 | + | Lag0030843.1 | Lac11g0205 | 586063 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0205 | 303 | FunFam | Glutathione S-transferase DHAR3, chloroplastic | 151 | 272 | - | - | |
Lac11g0205 | 303 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 71 | 149 | IPR004045 | - | |
Lac11g0205 | 303 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 64 | 270 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(InterPro)|GO:0045174(PANTHER)|GO:0098869(InterPro) | |
Lac11g0205 | 303 | SUPERFAMILY | GST C-terminal domain-like | 144 | 269 | IPR036282 | - | |
Lac11g0205 | 303 | CDD | GST_N_family | 81 | 142 | - | - | |
Lac11g0205 | 303 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 127 | 273 | IPR010987 | - | |
Lac11g0205 | 303 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 62 | 150 | - | - | |
Lac11g0205 | 303 | Pfam | Glutathione S-transferase, N-terminal domain | 81 | 143 | IPR004045 | - | |
Lac11g0205 | 303 | SUPERFAMILY | Thioredoxin-like | 79 | 148 | IPR036249 | - | |
Lac11g0205 | 303 | CDD | GST_C_DHAR | 150 | 270 | - | - | |
Lac11g0205 | 303 | SFLD | Main (cytGST) | 80 | 247 | - | - | |
Lac11g0205 | 303 | Gene3D | - | 151 | 272 | - | - | |
Lac11g0205 | 303 | Gene3D | Glutaredoxin | 63 | 150 | - | - | |
Lac11g0205 | 303 | SFLD | Glutathione Transferase (cytosolic) | 80 | 247 | IPR040079 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0205 | Lac-Chr11:1994550 | Lac13g0925 | Lac-Chr13:7661525 | 5.40E-74 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0205 | K21888 | - | csv:101203335 | 504.982 |