Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0239 ATGGAGAATTTGATGGGTCTTCTGAGAATCCATGTTTCAAGAGGTGTCAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTATTGTCAAGATGGGCAAACAGAAGTTGAAGACTCGAGTAGTGAAGCAAAATATAAACCCGAAGTGGAACGAAGATCTAACTCTATCGATCCAAGATCCGAATCTTCCGGTCTACCTAATCGTATACGACAAGGACTTGTTCTCACTAGACGACAGGATGGGGGACGCAGAGTTTGACGTTCGTCCATTCATGGAAGCTGTGAAGATGAGGCTGAACAATCTCCCAAGTGGAACAGTCATTAGAAAGATTCAACCAAACAGGGAAAATTGTCTGTCTGAAGAAAGTTGCATTGTTTGGGCAAATGGACAAGTTGTTCAGAAAATGTTTCTTAGGCTAAGAAATGTTGAGTCTGGTGAAGTTGAGCTCGAGTTGAAATGGATCGATATTCCTGGTTCGAGGGGATTGTAG 498 42.17 MENLMGLLRIHVSRGVNLAVRDVVSSDPYVIVKMGKQKLKTRVVKQNINPKWNEDLTLSIQDPNLPVYLIVYDKDLFSLDDRMGDAEFDVRPFMEAVKMRLNNLPSGTVIRKIQPNRENCLSEESCIVWANGQVVQKMFLRLRNVESGEVELELKWIDIPGSRGL 165
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 2362220 2363462 + Lag0030877.1 Lac11g0239 586097
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0239 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lac11g0239 165 Pfam C2 domain 6 93 IPR000008 -
Lac11g0239 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 102 IPR035892 -
Lac11g0239 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Lac11g0239 165 SMART C2_3c 7 102 IPR000008 -
Lac11g0239 165 Gene3D C2 domain 4 160 IPR035892 -
Lac11g0239 165 CDD C2_ArfGAP 6 148 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0239 Lac-Chr11:2362220 Lac3g0420 Lac-Chr3:3189914 9.40E-57 dispersed
Lac11g0239 Lac-Chr11:2362220 Lac10g0291 Lac-Chr10:2220391 1.90E-65 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0239 - - - 0.0