Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0340 ATGGCTAATCGGATCTCAGGTGTTTCACAAGTGTCCCCGGCTGACGTTCCCGACATGTCGTCCGATGTCGACGTAGAAGAAAAAGAAGAAGAAGTTGCGCCTTCGTCTCTTTCTTCTCAAAAGCTCCGACGATACGACTCCTTGGATTTAGAGTCTCGTAAACTCGACGGTCATCATCCTCATCATTCTGACGCCAAGGTCTTCTCTCTTAACTCTACATCTTTCTTTTCATTCTCCATTTCGCTAGCTCTTGATTGTGTATACATTTATGTCCAATGGCAGAACAAGAAATGGAGCGTCATATTACAACTGGCATTCCAGAGCATGGGGATAGTGTACGGCGACATCGGAACGTCGCCGCTGTACGTCTACTCCAGCACTTTCCCGGACGGAATAAAGCACAACGACGACGTTTTAGGAGCGCTCTCTTTGATCTTCTACACCATAACTCTGCTTCCGGTCATCAAGTACGTGTTCATCGTTCTCAGAGCAACCGACAACGGAGAAGGCGGAACGTTTGCGCTGTACTCTTTGATCTGTCGATACGCGAAATTAGGGCTAATTCCGAACGAAGAGATTGAAGATCGAGATGTGTCGAATTACCAGTTGAGTTTGCCGAATGAGAGAGAGAAGAGAGCTTCGAAGATCCAGTCGAGGCTGGAGAAGAGCCATTTCGCGAAGGTGTTTCTTCTGTTTGCGACGATGCTTGGAACCTCCATGGTTATCGGCGATGGCGTTCTCACTCCTTGTATCTCAGTTTTATCTGCTGTGGGAGGGATCAAGGAAGCTAACCCTGCAATGACAGAAGGTACGATTGTTTGGGTATCAGTAGGGATATTGGTGTTTCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATAATCTTCATTTGGTTTGGTTTTATCGGTGGGATCGGTGTTTACAACTTCATAAAATACGACCCATCTGTGATTAAGGCCTTAAATCCAATGTACATTGTTCATTACTTCCAAAGGAACCACAAGGATGCTTGGATCTCTCTTGGTGGCACTGTTCTTTCCATTACAGGAGCCGAAGCGTTGTTTGCTGACGTCGGACATTTCAGCGTGCGATCGATCCAACTAAGCATGTCAGCAGTGGCCTACCCAACTCTAATCTGTGCATATTTAGGCCAAACCTCCTTTCTTCGCAAGCATAACGATCTAGTTTCAAACACATTCTACAAGTCAATTCCTGGAAGTCTGTATTGGCCAATGTTTTTGTTGGCAGTTTCAGCATCCATCATAGCAAGCCAAGCATTGATCTCAGGAACTTTCTCTATAATTCAACAGTCAATTTCACTTGGATGCTTCCCTACAGTTAAAGTGGTTCACACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTTATGTTGGCTTGTATTGGTGTCACTTTGGGCTTCAAGGACACTACAAAGATTGGCAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCCTTCCTAGTTCTGATAATGGTGATGATATGGAAAACTCCTATCCTTTTCATAATCACTTACATCCTCATCATTGGTAGTGTTGAATTGATTTATCTAAGTTCAGTCCTTTACAAGTTCGATCAAGGAGGCTATCTCCCTTTGGCTTTTGCAGCTGTTTTGATGACTGTAATGTATGTGTGGAATAGTGTCTTTAGGAAAAAGTACTTTTATGAGCTCAACCACAGAATCTCCTCAGAAAAGCTCAATGAGGTCGTCAATACCACCAGCTTTAGAAGAATTCCTGGCGTGGCATTGTTCTACTCTGACCTTGTTCAAGGCATCCCACCCATCTTCAGGCATTACGTCGAGCACGTGCCTGCATTGCACTCTGTGCTCGTCTTCGTCACCATTAAATCGCTTCCTGTGAGCAAGGTTTTGGCCGAAGAACGTTTCCTCTTTCGTCAAGTAGAAGCCAAGAAGATTGATGTGTTTCGTTGTGTCGTTAGATACGGGTACGCAGACGTGCACACCGAACAAGAAACATTCGAGAGAATATTACTTGAGAGTTTAGAGGAGTTCGAAAGAGAACAACAGAATAAATTGTCTAACAGTGAAAACGGAGACGGAGTCGACAGGAAAATTGAAGGTGAAGATGAGAAAGAATTAGGAGTTGCAAAAGCATGGAAGGATGGAGTTGTTCATTTGATTGGGGAAACTGAGGTGGTTGCTCAAAAGGGAGCTGGCTTTGGAAAGAGGATTATGATAAACTATGCATATAACTTCTTGAAGAGGAATTTGGGGAAAACTGATCAAGTGTTTGATATTCCTCACAAGCATATGCTCAAAGTAGGAATGATTTATGAACTTTAG 2379 43.46 MANRISGVSQVSPADVPDMSSDVDVEEKEEEVAPSSLSSQKLRRYDSLDLESRKLDGHHPHHSDAKVFSLNSTSFFSFSISLALDCVYIYVQWQNKKWSVILQLAFQSMGIVYGDIGTSPLYVYSSTFPDGIKHNDDVLGALSLIFYTITLLPVIKYVFIVLRATDNGEGGTFALYSLICRYAKLGLIPNEEIEDRDVSNYQLSLPNEREKRASKIQSRLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEANPAMTEGTIVWVSVGILVFLFMVQRFGTDKVGYTFAPIIFIWFGFIGGIGVYNFIKYDPSVIKALNPMYIVHYFQRNHKDAWISLGGTVLSITGAEALFADVGHFSVRSIQLSMSAVAYPTLICAYLGQTSFLRKHNDLVSNTFYKSIPGSLYWPMFLLAVSASIIASQALISGTFSIIQQSISLGCFPTVKVVHTSAKYEGQVYVPEINYLLMLACIGVTLGFKDTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTPILFIITYILIIGSVELIYLSSVLYKFDQGGYLPLAFAAVLMTVMYVWNSVFRKKYFYELNHRISSEKLNEVVNTTSFRRIPGVALFYSDLVQGIPPIFRHYVEHVPALHSVLVFVTIKSLPVSKVLAEERFLFRQVEAKKIDVFRCVVRYGYADVHTEQETFERILLESLEEFEREQQNKLSNSENGDGVDRKIEGEDEKELGVAKAWKDGVVHLIGETEVVAQKGAGFGKRIMINYAYNFLKRNLGKTDQVFDIPHKHMLKVGMIYEL 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3478648 3483419 - Lag0030978.1 Lac11g0340 586198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0340 792 Pfam K+ potassium transporter integral membrane domain 104 591 IPR053951 -
Lac11g0340 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 92 791 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac11g0340 792 Pfam K+ potassium transporter C-terminal domain 604 792 IPR053952 -
Lac11g0340 792 NCBIfam potassium uptake protein 104 791 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac11g0340 792 MobiDBLite consensus disorder prediction 1 16 - -
Lac11g0340 792 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0340 Lac-Chr11:3478648 Lac11g0344 Lac-Chr11:3541095 0.00E+00 dispersed
Lac11g0340 Lac-Chr11:3478648 Lac11g0343 Lac-Chr11:3494361 5.60E-131 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0340 K03549 - csv:101215797 1182.55