Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0343 ATGACACTCACATCCTCCTTCCTAGTTCTAATAATGGTGATGATATGGAAAACTCGCATCCTTTTCATAATCACTTACATCCTCATCATTGGTAGTGTTGAATTGCTTTATCTGAGTTCAGTCCTTTACAAGTTCGATCAAGGAGGCTATCTCCCTCTGGCTTTTGCAGCTGTTTTGATGACTGTAATGTATGTGTGGAATAGTGTCTTTAGAAAAAAGTACTTTTATGAGCTCAGCCACAAAATCTCCTCAGAAAAGCTCAATGAGGTCGTCAATGCCACCAGCATTAGAAGAATTCCTGGCGTGGCATTGTTCTACTCTGACCTTGTTCAAGGCATCCCACCCATCTTCGGGCATTACGTCAAGCACGTGCCTGCGTTGCACTCTGTGCTCGTCTTCGTCACCATTAAATCGCTTCCTGTGAGCAAGGTTCCGGCAGAAAAACGTTTCCTCTTTCGTCAAGTAGAAGTCAAGGAGATTGACGTGTTTCGTTGTGTCGTTAGATATGGGTACGCAGACGTGCACACCAAACAAGAATCGTTCGAGAAGATATTACTTGAGAGATTGGAGAAGTTTGAAAGAGACCAATGGAACAAATTGTCTAACGACGAAAATGGAGTTGACGGGAGAGTTGAAGGTGAAGATGAGAAAGGATTTGGAGGAGTTGCAGAAGCATGGAAGGATGGAGTTGTTCATTTGATTGGGGAAACTGAGGTGGTTGCTCAAAAAGAGGCTGGCTTTGGAAAGAAGATTATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAAACTGATCAAGTGTTCCATATTCCTCACAAGCATATGCTCAAAGATTGTTTGGATATCAGTAGGGATATTGGTGTGCCTGTTGTTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATAATCTTCATTTGGTTTGGGTTCAACGCTGGATCGGTGTTTACAACTTCATAAAATACGACCCATCTGTGATTAAGGCCTTAAATCCAATGTACATTGTTCATTACTTCCAAAGGAACAACAAGGATGCTTGGATCTCTCTTGGTGGCATTGTTCTTTCCATTACAAGAACCGAAGCGTTGTTCACCGACATCGGGCATTTCAGCGTGCGATCTATCCAACTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATCTGTGCATATGTAGGCCAAGCCTCCTTTCTTCGCAAGCATAATGATCTAGTTTCAGACACATTCTACAAGTCAATTCCTGGAAGTCTGTATTGGCCAATGTTTGTGTTGGCAGTTTCAGCATCCATCATAGCAAGCCAAGCATTGATCTCAGGAACTTTCTCTATAATTCAACAGTCAATTTCACTTGGATGCTTCCCTACAGTTAAAGTGGTTCACACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTATTGGTGTCACTTTGGGCTTCAAGGACACTACAAAGATTGGCAATGCATATGGTAAAATGCCCTTTTCTTTGGTCTCTTTTAGATGA 1557 42.0 MTLTSSFLVLIMVMIWKTRILFIITYILIIGSVELLYLSSVLYKFDQGGYLPLAFAAVLMTVMYVWNSVFRKKYFYELSHKISSEKLNEVVNATSIRRIPGVALFYSDLVQGIPPIFGHYVKHVPALHSVLVFVTIKSLPVSKVPAEKRFLFRQVEVKEIDVFRCVVRYGYADVHTKQESFEKILLERLEKFERDQWNKLSNDENGVDGRVEGEDEKGFGGVAEAWKDGVVHLIGETEVVAQKEAGFGKKIMINYAYSFLKRNLRQTDQVFHIPHKHMLKDCLDISRDIGVPVVHGSKIWNRQSWLHFCSNNLHLVWVQRWIGVYNFIKYDPSVIKALNPMYIVHYFQRNNKDAWISLGGIVLSITRTEALFTDIGHFSVRSIQLSMSAVTYPALICAYVGQASFLRKHNDLVSDTFYKSIPGSLYWPMFVLAVSASIIASQALISGTFSIIQQSISLGCFPTVKVVHTSAKYEGQVYVPEINYLLMLACIGVTLGFKDTTKIGNAYGKMPFSLVSFR 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3494361 3497112 - Lag0030981.1 Lac11g0343 586201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0343 518 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 319 508 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac11g0343 518 Pfam K+ potassium transporter integral membrane domain 1 87 IPR053951 -
Lac11g0343 518 Pfam K+ potassium transporter integral membrane domain 320 508 IPR053951 -
Lac11g0343 518 Pfam K+ potassium transporter C-terminal domain 100 278 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0343 Lac-Chr11:3494361 Lac4g2402 Lac-Chr4:43563122 2.00E-92 dispersed
Lac11g0340 Lac-Chr11:3478648 Lac11g0343 Lac-Chr11:3494361 5.60E-131 proximal
Lac11g0343 Lac-Chr11:3494361 Lac11g0344 Lac-Chr11:3541095 6.40E-144 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0343 K03549 - csv:101215797 439.113