Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0344 ATGGCTAATCGGATCTCTGGTGTTTCAGAAGTGTCCCCGGCTGCCGTTCCCGACATGTCGTCCGGTGTCGACGTAGAAGAAGAAGAAGAAGTTGCGCCTTCTCTTTCTGATCTTCACTCTCAAGAGAGGAAGCTCTCATGGCAAAAACTCCGACGATACGACTCCTTGGATTTAGAGTCTCGTAAACTCGACGGTCATCATCCTCATCGTTCCGACGCCAAGAACAAGGAATGGAGCGTGATATTACAACTGGCTTTCCAGAGCATTGGTATAGTGTACGGCGACATCGGAACCTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGAATAAAGCACAACGACGACGTTTTAGGAGCACTCTCTTTGATCTTCTACACCATAACTCTCATTCCGGTCATCAAGTACGTCTTCATCGTTCTCAGAGCCAACGACAACGGAGAAGGCGGAACGTTTGCGCTGTACTCTTTAATCTGTCGATACGCGAAATTAGGGCTAATTCCGAACGAAGAGATTGAAGATCGAGATGTGTCGAATTACCAGTTGAGTTTGCCGAATGAGAGAGAGAAGAGAGCTTCGAAGATCCAGTCGAGGCTGGAGAAGAGCCATTTCGCGAAGGTGTTTCTTCTGTTTGCGACGATGCTTGGAACCTCCATGGTTATCGGCGATGGCGTTCTCACTCCTTGTATCTCAGTTTTATCTGCTGTGGGAGGGATCAAGGAAGCTACCCCTGCAATGACAGAAGGTAAGATTGTTTGGGTATCAGTAGGGATATTGGTGTGCCTGTTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATAATCTTCATTTGGTTTGGTTTCATCGGTGGGATCGGTGTTTACAACTTCATAAAATACGACCCATCTGTGATTAAGGCCTTAAATCCAATGTACATTGTTCATTACTTCCAAAGGAACAACAAGGATGCTTGGATCTCTCTTGGTGGCATTGTTCTTTCCATTACAGGAACTGAAGCGTTGTTCGCCGACGTCGGGCATTTCAGCGTGCGATCTATCCAGCTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATCTGTGCATATGTAGGCCAAGCCTCCTTTCTTCGCAAGCATAACGATCTAGTTTCGGACACATTCTACAAGTCAACTCCTGGAGGTCTGTATTGGCCAATGTTTGTGGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAACTTTCTCAATAATTCAACAGTCACTTTCACTTGGATGCTTCCCTAGAGTTAAAGTGGTTCACACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTATTGGTGTCACTTTGGGCTTCAAGAACACTACAAAGATTGGCAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCCTTCCTAGTTCTGATAATGGTGATGATATGGAAAACTCATATCCTTTTCATAATCACTTACATCCTCATCATTGGTAGTGTTGAATTGATTTATCTGAGTTCAGTCCTTTACAAGTTCGACCAAGGAGGCTATCTCCCCTTGGCTTTTGCAGCTGTTTTGATGACTGTAATGTATGTGTGGAATAGTGTCTTTAGAAAAAAGTACTTTTATGAGCTCAGCCACAAAATCTCCTCAGAAAAGCTCAATGAGATCGTCAATACCACCAGCTTTAGAAGAATTCCTGGCGTGGCACTGTTCTACTCTGAGCTTGTTCAAGGCATCCCACCCATCTTCAAGCATTATGTCGAGCACGTGCCTGCATTGCACTCTGTGCTCGTCTTCGTCACCATTAAATCACTTCCCGTGAGCAAGGTTCCGGCCGAAGAACGTTTCCTCTTTCGTGAAGTAGAGGCCAAGGAGATTGACGTGTTTCGTTGTGTCGTTAGATATGGGTACGCAGACGTGCACACCGAACAAGAATCATTCGAGAGGATATTACTTGAGAGATTGGAGGAGTTCGAAAGAGAACAACGGAATAAATTGTCTAACGGCGAAAACGGAGTCGACAGGAGAGTTGAAGGTGAAGATGAGAAAGGATTTGGAGGAGTTGCAGAAGCATGGAAGGATGGAGTTGTTCATTTGATTGGGGAAACTGAGGTGGTTGCTCAAAAAGAGGCTGGCTTTGGAAAGAAGATTATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAAACTGATCAAGTGTTCCATATTCCTCACAAGCATATGCTCAAAGTAGGAATGACTTATGAACTTTAG 2316 44.82 MANRISGVSEVSPAAVPDMSSGVDVEEEEEVAPSLSDLHSQERKLSWQKLRRYDSLDLESRKLDGHHPHRSDAKNKEWSVILQLAFQSIGIVYGDIGTSPLYVYSSTFPDGIKHNDDVLGALSLIFYTITLIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKLGLIPNEEIEDRDVSNYQLSLPNEREKRASKIQSRLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGKIVWVSVGILVCLFMVQRFGTDKVGYTFAPIIFIWFGFIGGIGVYNFIKYDPSVIKALNPMYIVHYFQRNNKDAWISLGGIVLSITGTEALFADVGHFSVRSIQLSMSAVTYPALICAYVGQASFLRKHNDLVSDTFYKSTPGGLYWPMFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACIGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILFIITYILIIGSVELIYLSSVLYKFDQGGYLPLAFAAVLMTVMYVWNSVFRKKYFYELSHKISSEKLNEIVNTTSFRRIPGVALFYSELVQGIPPIFKHYVEHVPALHSVLVFVTIKSLPVSKVPAEERFLFREVEAKEIDVFRCVVRYGYADVHTEQESFERILLERLEEFEREQRNKLSNGENGVDRRVEGEDEKGFGGVAEAWKDGVVHLIGETEVVAQKEAGFGKKIMINYAYSFLKRNLRQTDQVFHIPHKHMLKVGMTYEL 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3541095 3550670 - Lag0030982.1 Lac11g0344 586202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0344 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 69 770 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac11g0344 771 MobiDBLite consensus disorder prediction 1 39 - -
Lac11g0344 771 Pfam K+ potassium transporter C-terminal domain 584 771 IPR053952 -
Lac11g0344 771 Pfam K+ potassium transporter integral membrane domain 84 571 IPR053951 -
Lac11g0344 771 NCBIfam potassium uptake protein 84 770 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0340 Lac-Chr11:3478648 Lac11g0344 Lac-Chr11:3541095 0.00E+00 dispersed
Lac11g0344 Lac-Chr11:3541095 Lac4g2402 Lac-Chr4:43563122 1.10E-301 dispersed
Lac11g0343 Lac-Chr11:3494361 Lac11g0344 Lac-Chr11:3541095 6.40E-144 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0344 K03549 - csv:101215797 1231.08