Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0372 ATGGCATTGCTTGCTAAAGAAAGTGTAGAAAGTGGACAACAAATTTCTAGTATTATTGGGACTGGCAAATGTGAAAGTTACTTAATTTTTAGTGGTGAAACTTCCCTTGGGGGTGCATTTCGGATATTCCTATATTTTATGGGTCTTGCTTATTGTTTCATTGGATTGTCTGCTATTACTGCTCGATTTTTCCGGTCTATGGAGAATGTTGTGAAGCACTCAAAGAAGGTGGTAGAGATAGATCCAGACACCAATGCTGAAATTATTCGATATGAGAAGGTCTGGAATTTTACGGTTGCAGATATCAGCTTACTGGCATTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTCTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTCCCCATTCATGCTGTTTGCGTTGTAGTGCCTAAGGCAGGAGAGTTGAAAAAAATATCTGACATAGGAGTTTGGCTAGTTGAACTCGTTTGGTCTTTCTGGGCTTATGTTTGGCTGTACATTATTTTGGAGGTGTGGACTCCAAATGTTATCACTCTTTGGGAAGCTTTGTTGACTGTGCTGCAATATGGATTATTGCTGACACATGCTTATGCTCAAGATAAGCGATGGCCCTACGTGTCCCTTCCTTTTGCAAGAACTGAGAGGCCAGAAGAATGGGTGCCACCTGAGACTGCTACATGCAGACAGGATGATGTCTATGGAGAGATATTTGAAGCCCGTGAGAATGGGGAGAGAAGCATTGTGGACATTTTCTCTGTCCATGATAAAAATGAGAAAGTGTATCATGAAGTTCCTGGACACGATGTTGCTGAATCCTCGTGTAGTAATTTTCCGGAGGAGATGGATAAAAACGTAGACCATCCTCGTGTGCTTACAGTTTGGAAACAACAATTTGTGGATGCACTCGCGTTGGAAACTTTGGAATCAAGAAAGCTGAGTAACACCTATGTACGACTAGCGAGATTATGCTGGCAGCTGTTTCTTGCTCCGTGGAGACTTTTGTTTGCTTTTGTGCCTCCTTATCACATTGCTCATGGATGGCTTTCCTTTATTGGCTCCCTTATTTTCATAAGTGGGATAGCTTATATCGTCACTAAGCTCACAGATCTTATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCTGGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCTGAGCGGCAGACAACCGCAGACTCTGCCATTGCAAACATTACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGGTGATAAGCTGTGCATACAATTTCATAGCGTATAGAGAGCCGTTGAGGATAGAGGATGCAGCAGGGCTGAGCTTCTCTTTGCTGGTGTTTTTTTCGACCTCTGTGGGATGCATTGCTGTTCTTGTGGTTAGGCGTCTAACATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGATTACGTGCATCTATTTCATGCTTCTTTGGGTCATCTTTGTTGTTCTGTCTTCCCTCAAGGTTTCAGATATCATCTGA 1614 43.0 MALLAKESVESGQQISSIIGTGKCESYLIFSGETSLGGAFRIFLYFMGLAYCFIGLSAITARFFRSMENVVKHSKKVVEIDPDTNAEIIRYEKVWNFTVADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELVWSFWAYVWLYIILEVWTPNVITLWEALLTVLQYGLLLTHAYAQDKRWPYVSLPFARTERPEEWVPPETATCRQDDVYGEIFEARENGERSIVDIFSVHDKNEKVYHEVPGHDVAESSCSNFPEEMDKNVDHPRVLTVWKQQFVDALALETLESRKLSNTYVRLARLCWQLFLAPWRLLFAFVPPYHIAHGWLSFIGSLIFISGIAYIVTKLTDLISCVSGINPYVIAFTALAGGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWVISCAYNFIAYREPLRIEDAAGLSFSLLVFFSTSVGCIAVLVVRRLTLGAELGGPRLWAWITCIYFMLLWVIFVVLSSLKVSDII 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3815109 3820044 + Lag0031010.1 Lac11g0372 586230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0372 537 Pfam Sodium/calcium exchanger protein 366 529 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac11g0372 537 Pfam Sodium/calcium exchanger protein 45 216 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac11g0372 537 Gene3D - 98 237 IPR044880 -
Lac11g0372 537 Gene3D - 325 531 IPR044880 -
Lac11g0372 537 PANTHER SODIUM/CALCIUM EXCHANGER 11 223 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0372 K03452 - csv:101205540 916.761