Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0424 ATGGAGAAGAAGAAGGAAGAGATTATAAAGATGGAGGACACTAGCACGAGCGGCGGCGACTGCGGCAGCGGCGGCGGCGGCGGCGGTGGTGGTGGGTATTTGTCATTTTCCGATAATATGATAGCAAATAGTTTCTTGGATTTTTCTGATGGTGAAAAATGCTCTGTTGGGTTCATGGAGCTGCTTGGTCTCAATAATCATGAGTTTAAGGATTACTGTTCCGAGGTTTTCAATCCTCCGGCCACCCCCAATTCCTCCTCCGTCTCCTCCGCCTCTAGCGACGCCGTTAACGACGACCCCACCGCCGCCGCCGCCGCCGATCACAAGGCTGATGATGATGACCCACAACAACAACAACAACAACACAGACCCACTAAACAATTGAAGGCAAAGAAGACGAATGGAAAGAGAGAAAAAGAGGCGAGATTTGCATTCATGACGAAGAGCGAAGTTGATCATCTCGAAGATGGATATCGATGGAGAAAGTATGGCCAAAAAGCTGTCAAAAACAGCCCTTTTCCTAGGAGCTATTATCGTTGCACAAGTGCAGCTTGTAATGTAAAGAAGAGAGTTGAACGATCTTATGTTGATCCAACCATTGTGGTGACCACCTATGAAGGCCAACACACTCACCCGAGCCCGGTCCTCACCCGGTCCGCCCTAGGCATTTCCATTCCACCACCGCCCTCCACCGATATATCGGGAGGAGGGTGTGTTGGCATTGCGGCCATGCCATGGCTCAAAGCTACCAACAACTCCCACGAAGGCAACATTCCAGCAATATCTCATCAGTACCTTCAAAACCCGACCTTCTTCACTGTCCAACATACGGATGGCGATTACAACCGCAACCTCATCGGAGCAGCGAACATGGCCGGGTTCCTTCAGGAGAAACGATTCTGCAACCCAAATCCTGCCTTTCTTGCAGACCATGGGCTGCTTCAAGATGTTGTTCCTCCCCACATGCTGAAACAGGAGTAA 981 50.36 MEKKKEEIIKMEDTSTSGGDCGSGGGGGGGGGYLSFSDNMIANSFLDFSDGEKCSVGFMELLGLNNHEFKDYCSEVFNPPATPNSSSVSSASSDAVNDDPTAAAAADHKADDDDPQQQQQQHRPTKQLKAKKTNGKREKEARFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSAACNVKKRVERSYVDPTIVVTTYEGQHTHPSPVLTRSALGISIPPPPSTDISGGGCVGIAAMPWLKATNNSHEGNIPAISHQYLQNPTFFTVQHTDGDYNRNLIGAANMAGFLQEKRFCNPNPAFLADHGLLQDVVPPHMLKQE 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4337707 4340871 + Lag0031062.1 Lac11g0424 586282

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0424 326 Gene3D WRKY domain 139 215 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0424 326 MobiDBLite consensus disorder prediction 81 97 - -
Lac11g0424 326 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0424 326 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0424 326 MobiDBLite consensus disorder prediction 104 119 - -
Lac11g0424 326 MobiDBLite consensus disorder prediction 81 138 - -
Lac11g0424 326 MobiDBLite consensus disorder prediction 1 29 - -
Lac11g0424 326 FunFam WRKY transcription factor 57 140 214 - -
Lac11g0424 326 SMART WRKY_cls 154 213 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0424 326 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0424 326 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 230 IPR044810 GO:0003700(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0424 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0424 Lac-Chr11:4337707 Lac1g3492 Lac-Chr1:54217786 7.40E-37 dispersed
Lac11g0974 Lac-Chr11:10736993 Lac11g0424 Lac-Chr11:4337707 2.40E-42 transposed
Lac11g0424 Lac-Chr11:4337707 Lac4g2544 Lac-Chr4:44646611 7.30E-45 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lac8g1900 . 164 438 WRKY Transcription Factor Family AT4G12020 51.4 4.5e-59 228.4
Lac12g0371 . 144 392 WRKY Transcription Factor Family AT2G04880 58.1 6.5e-79 292.4
Lac13g0351 . 19 494 WRKY Transcription Factor Family AT2G03340 53.7 3.1e-122 436.4
Lac8g2724 . 12 503 WRKY Transcription Factor Family AT2G03340 50.9 3.1e-114 409.8
Lac7g2888 . 196 449 WRKY Transcription Factor Family AT2G03340 52.5 1.5e-63 241.5
Lac5g0962 . 223 472 WRKY Transcription Factor Family AT2G03340 53.8 3.2e-63 240.4
Lac13g0351 . 115 494 WRKY Transcription Factor Family AT1G13960 58.1 6.1e-101 365.2
Lac8g2724 . 139 503 WRKY Transcription Factor Family AT1G13960 50.3 3.2e-81 299.7
Lac7g2888 . 195 448 WRKY Transcription Factor Family AT1G13960 51.9 5.8e-67 252.3
Lac10g3270 . 154 393 WRKY Transcription Factor Family AT1G13960 53.3 1.1e-65 248.1
Lac5g0962 . 224 473 WRKY Transcription Factor Family AT1G13960 52.7 3.5e-64 243.0
Lac8g1900 . 164 438 WRKY Transcription Factor Family AT4G12020 51.4 4.5e-59 228.4
Lac5g0962 . 43 587 WRKY Transcription Factor Family AT4G26640 50.5 1.1e-127 454.5
Lac7g2888 . 193 443 WRKY Transcription Factor Family AT5G07100 56.1 4.5e-67 251.9
Lac10g3270 . 153 380 WRKY Transcription Factor Family AT5G07100 57.3 7.7e-67 251.1
Lac9g2348 . 164 407 WRKY Transcription Factor Family AT5G07100 52.4 2.0e-62 236.5
Lac13g0351 . 202 454 WRKY Transcription Factor Family AT2G38470 55.9 1.1e-66 251.9
Lac5g0656 . 378 662 WRKY Transcription Factor Family AT2G38470 51.4 4.1e-66 250.0
Lac8g2724 . 231 466 WRKY Transcription Factor Family AT2G38470 53.5 2.5e-63 240.7
Lac5g0962 . 228 470 WRKY Transcription Factor Family AT2G38470 50.9 1.6e-62 238.0
Lac8g2724 . 229 457 WRKY Transcription Factor Family AT4G26440 50.2 2.0e-66 251.1
Lac7g2888 . 204 444 WRKY Transcription Factor Family AT4G26440 51.0 1.8e-62 238.0
Lac8g0090 . 77 168 WRKY Transcription Factor Family AT3G01970 77.2 1.8e-38 156.4
Lac7g1265 . 122 216 WRKY Transcription Factor Family AT3G01970 72.6 1.5e-37 153.3
Lac1g3193 . 38 578 WRKY Transcription Factor Family AT1G62300 50.5 6.9e-112 402.1
Lac3g0633 . 202 363 WRKY Transcription Factor Family AT1G62300 57.0 2.6e-42 171.0
Lac3g0633 . 202 307 WRKY Transcription Factor Family AT1G68150 75.5 9.7e-41 165.2
Lac10g0367 . 256 341 WRKY Transcription Factor Family AT1G68150 87.2 2.8e-40 163.7
Lac1g3193 . 331 428 WRKY Transcription Factor Family AT1G68150 73.5 3.2e-36 150.2
Lac1g3193 . 40 574 WRKY Transcription Factor Family AT4G22070 51.0 1.2e-108 391.3
Lac5g2527 . 212 327 WRKY Transcription Factor Family AT4G22070 68.6 1.0e-38 159.1
Lac3g0633 . 193 363 WRKY Transcription Factor Family AT4G22070 52.3 6.4e-38 156.4
Lac12g0572 . 87 485 WRKY Transcription Factor Family AT4G04450 53.6 8.7e-94 341.7
Lac1g3193 . 132 575 WRKY Transcription Factor Family AT4G04450 52.3 3.7e-92 336.3
Lac3g0633 . 202 372 WRKY Transcription Factor Family AT4G04450 56.3 1.7e-41 167.9
Lac5g2527 . 220 338 WRKY Transcription Factor Family AT4G04450 68.1 3.6e-39 160.2
Lac12g0572 . 263 351 WRKY Transcription Factor Family AT1G18860 76.4 3.1e-37 154.1
Lac7g0034 . 106 216 WRKY Transcription Factor Family AT2G44745 82.5 1.1e-52 204.1
Lac1g2434 . 149 235 WRKY Transcription Factor Family AT2G44745 81.6 2.0e-38 156.8
Lac9g0429 . 151 237 WRKY Transcription Factor Family AT2G44745 81.6 4.9e-37 152.1
Lac9g0429 . 136 250 WRKY Transcription Factor Family AT4G39410 76.9 2.4e-45 180.3
Lac1g2434 . 143 232 WRKY Transcription Factor Family AT4G39410 84.4 6.0e-41 165.6
Lac11g0424 . 136 326 WRKY Transcription Factor Family AT2G47260 52.1 8.7e-41 165.2
Lac11g0974 . 137 220 WRKY Transcription Factor Family AT2G47260 84.5 1.3e-36 151.4
Lac5g2176 . 66 174 WRKY Transcription Factor Family AT5G41570 73.4 1.7e-43 173.3
Lac1g3492 . 41 268 WRKY Transcription Factor Family AT4G18170 51.5 1.1e-48 191.4
Lac12g0876 . 145 242 WRKY Transcription Factor Family AT4G18170 78.6 7.0e-40 162.2
Lac7g0975 . 146 310 WRKY Transcription Factor Family AT5G49520 51.9 3.2e-42 170.2
Lac12g0876 . 144 263 WRKY Transcription Factor Family AT5G49520 66.7 2.1e-38 157.5
Lac1g3492 . 91 188 WRKY Transcription Factor Family AT5G49520 72.4 2.4e-37 154.1
Lac5g2176 . 35 176 WRKY Transcription Factor Family AT1G64000 61.1 2.2e-44 176.4
Lac11g0974 . 130 244 WRKY Transcription Factor Family AT1G69310 65.0 9.1e-39 158.3
Lac7g0975 . 146 308 WRKY Transcription Factor Family AT1G69310 52.1 1.9e-36 150.6
Lac1g3492 . 88 259 WRKY Transcription Factor Family AT1G29860 57.6 1.2e-48 191.0
Lac12g0876 . 145 237 WRKY Transcription Factor Family AT1G29860 81.7 5.2e-39 159.1
Lac9g2256 . 148 295 WRKY Transcription Factor Family AT1G29860 52.1 8.3e-37 151.8
Lac7g1265 . 118 216 WRKY Transcription Factor Family AT5G13080 83.8 2.8e-44 175.6
Lac8g0090 . 74 170 WRKY Transcription Factor Family AT5G13080 81.4 2.9e-41 165.6
Lac2g0685 . 1 289 WRKY Transcription Factor Family AT4G31550 62.8 9.1e-86 314.3
Lac3g0363 . 1 240 WRKY Transcription Factor Family AT4G31550 50.2 2.5e-51 199.9
Lac2g0685 . 1 345 WRKY Transcription Factor Family AT2G24570 61.7 1.4e-109 393.7
Lac3g0363 . 1 294 WRKY Transcription Factor Family AT2G24570 51.5 4.2e-69 259.2
Lac11g2645 . 192 338 WRKY Transcription Factor Family AT2G24570 55.8 3.4e-42 169.9
Lac4g2208 . 193 338 WRKY Transcription Factor Family AT2G24570 54.7 1.7e-41 167.5
Lac11g2645 . 1 342 WRKY Transcription Factor Family AT2G30590 51.7 5.0e-85 312.4
Lac4g2208 . 1 348 WRKY Transcription Factor Family AT2G30590 53.1 6.5e-85 312.0
Lac2g0348 . 213 372 WRKY Transcription Factor Family AT2G30590 59.9 7.0e-47 185.7
Lac9g1320 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 9.5e-44 175.3
Lac3g0363 . 130 279 WRKY Transcription Factor Family AT2G30590 55.8 2.0e-41 167.5
Lac2g0685 . 165 326 WRKY Transcription Factor Family AT2G30590 55.5 1.7e-40 164.5
Lac4g2208 . 1 348 WRKY Transcription Factor Family AT5G28650 53.2 3.2e-80 296.2
Lac9g1320 . 181 287 WRKY Transcription Factor Family AT5G28650 72.0 1.9e-40 164.1
Lac7g0201 . 132 228 WRKY Transcription Factor Family AT1G30650 65.5 1.3e-36 151.8
Lac10g1260 . 161 295 WRKY Transcription Factor Family AT4G01250 58.6 2.0e-36 150.6
Lac7g0201 . 90 236 WRKY Transcription Factor Family AT5G52830 58.0 1.8e-41 167.5
Lac7g0201 . 133 228 WRKY Transcription Factor Family AT2G34830 67.9 2.0e-37 154.5
Lac12g0754 . 20 300 WRKY Transcription Factor Family AT3G58710 54.4 3.4e-51 199.5
Lac12g0371 . 144 392 WRKY Transcription Factor Family AT2G04880 58.1 6.5e-79 292.4
Lac2g0685 . 1 289 WRKY Transcription Factor Family AT4G31550 62.8 9.1e-86 314.3
Lac3g0363 . 1 240 WRKY Transcription Factor Family AT4G31550 50.2 2.5e-51 199.9
Lac7g0034 . 106 216 WRKY Transcription Factor Family AT2G44745 82.5 1.1e-52 204.1
Lac1g2434 . 149 235 WRKY Transcription Factor Family AT2G44745 81.6 2.0e-38 156.8
Lac9g0429 . 151 237 WRKY Transcription Factor Family AT2G44745 81.6 4.9e-37 152.1
Lac9g0429 . 136 250 WRKY Transcription Factor Family AT4G39410 76.9 2.4e-45 180.3
Lac1g2434 . 143 232 WRKY Transcription Factor Family AT4G39410 84.4 6.0e-41 165.6
Lac7g0201 . 132 228 WRKY Transcription Factor Family AT1G30650 65.5 1.3e-36 151.8
Lac2g0685 . 1 345 WRKY Transcription Factor Family AT2G24570 61.7 1.4e-109 393.7
Lac3g0363 . 1 294 WRKY Transcription Factor Family AT2G24570 51.5 4.2e-69 259.2
Lac11g2645 . 192 338 WRKY Transcription Factor Family AT2G24570 55.8 3.4e-42 169.9
Lac4g2208 . 193 338 WRKY Transcription Factor Family AT2G24570 54.7 1.7e-41 167.5
Lac8g1900 . 164 438 WRKY Transcription Factor Family AT4G12020 51.4 4.5e-59 228.4
Lac5g0962 . 43 587 WRKY Transcription Factor Family AT4G26640 50.5 1.1e-127 454.5
Lac11g2645 . 1 342 WRKY Transcription Factor Family AT2G30590 51.7 5.0e-85 312.4
Lac4g2208 . 1 348 WRKY Transcription Factor Family AT2G30590 53.1 6.5e-85 312.0
Lac2g0348 . 213 372 WRKY Transcription Factor Family AT2G30590 59.9 7.0e-47 185.7
Lac9g1320 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 9.5e-44 175.3
Lac3g0363 . 130 279 WRKY Transcription Factor Family AT2G30590 55.8 2.0e-41 167.5
Lac2g0685 . 165 326 WRKY Transcription Factor Family AT2G30590 55.5 1.7e-40 164.5
Lac10g1260 . 161 295 WRKY Transcription Factor Family AT4G01250 58.6 2.0e-36 150.6
Lac11g0424 . 136 326 WRKY Transcription Factor Family AT2G47260 52.1 8.7e-41 165.2
Lac11g0974 . 137 220 WRKY Transcription Factor Family AT2G47260 84.5 1.3e-36 151.4
Lac5g2176 . 66 174 WRKY Transcription Factor Family AT5G41570 73.4 1.7e-43 173.3
Lac7g2888 . 193 443 WRKY Transcription Factor Family AT5G07100 56.1 4.5e-67 251.9
Lac10g3270 . 153 380 WRKY Transcription Factor Family AT5G07100 57.3 7.7e-67 251.1
Lac9g2348 . 164 407 WRKY Transcription Factor Family AT5G07100 52.4 2.0e-62 236.5
Lac7g0201 . 90 236 WRKY Transcription Factor Family AT5G52830 58.0 1.8e-41 167.5
Lac1g3492 . 41 268 WRKY Transcription Factor Family AT4G18170 51.5 1.1e-48 191.4
Lac12g0876 . 145 242 WRKY Transcription Factor Family AT4G18170 78.6 7.0e-40 162.2
Lac13g0351 . 19 494 WRKY Transcription Factor Family AT2G03340 53.7 3.1e-122 436.4
Lac8g2724 . 12 503 WRKY Transcription Factor Family AT2G03340 50.9 3.1e-114 409.8
Lac7g2888 . 196 449 WRKY Transcription Factor Family AT2G03340 52.5 1.5e-63 241.5
Lac5g0962 . 223 472 WRKY Transcription Factor Family AT2G03340 53.8 3.2e-63 240.4
Lac1g3193 . 40 574 WRKY Transcription Factor Family AT4G22070 51.0 1.2e-108 391.3
Lac5g2527 . 212 327 WRKY Transcription Factor Family AT4G22070 68.6 1.0e-38 159.1
Lac3g0633 . 193 363 WRKY Transcription Factor Family AT4G22070 52.3 6.4e-38 156.4
Lac13g0351 . 202 454 WRKY Transcription Factor Family AT2G38470 55.9 1.1e-66 251.9
Lac5g0656 . 378 662 WRKY Transcription Factor Family AT2G38470 51.4 4.1e-66 250.0
Lac8g2724 . 231 466 WRKY Transcription Factor Family AT2G38470 53.5 2.5e-63 240.7
Lac5g0962 . 228 470 WRKY Transcription Factor Family AT2G38470 50.9 1.6e-62 238.0
Lac8g2724 . 229 457 WRKY Transcription Factor Family AT4G26440 50.2 2.0e-66 251.1
Lac7g2888 . 204 444 WRKY Transcription Factor Family AT4G26440 51.0 1.8e-62 238.0
Lac7g0201 . 133 228 WRKY Transcription Factor Family AT2G34830 67.9 2.0e-37 154.5
Lac13g0351 . 115 494 WRKY Transcription Factor Family AT1G13960 58.1 6.1e-101 365.2
Lac8g2724 . 139 503 WRKY Transcription Factor Family AT1G13960 50.3 3.2e-81 299.7
Lac7g2888 . 195 448 WRKY Transcription Factor Family AT1G13960 51.9 5.8e-67 252.3
Lac10g3270 . 154 393 WRKY Transcription Factor Family AT1G13960 53.3 1.1e-65 248.1
Lac5g0962 . 224 473 WRKY Transcription Factor Family AT1G13960 52.7 3.5e-64 243.0
Lac12g0572 . 87 485 WRKY Transcription Factor Family AT4G04450 53.6 8.7e-94 341.7
Lac1g3193 . 132 575 WRKY Transcription Factor Family AT4G04450 52.3 3.7e-92 336.3
Lac3g0633 . 202 372 WRKY Transcription Factor Family AT4G04450 56.3 1.7e-41 167.9
Lac5g2527 . 220 338 WRKY Transcription Factor Family AT4G04450 68.1 3.6e-39 160.2
Lac8g0090 . 77 168 WRKY Transcription Factor Family AT3G01970 77.2 1.8e-38 156.4
Lac7g1265 . 122 216 WRKY Transcription Factor Family AT3G01970 72.6 1.5e-37 153.3
Lac7g0975 . 146 310 WRKY Transcription Factor Family AT5G49520 51.9 3.2e-42 170.2
Lac12g0876 . 144 263 WRKY Transcription Factor Family AT5G49520 66.7 2.1e-38 157.5
Lac1g3492 . 91 188 WRKY Transcription Factor Family AT5G49520 72.4 2.4e-37 154.1
Lac5g2176 . 35 176 WRKY Transcription Factor Family AT1G64000 61.1 2.2e-44 176.4
Lac11g0974 . 130 244 WRKY Transcription Factor Family AT1G69310 65.0 9.1e-39 158.3
Lac7g0975 . 146 308 WRKY Transcription Factor Family AT1G69310 52.1 1.9e-36 150.6
Lac1g3193 . 38 578 WRKY Transcription Factor Family AT1G62300 50.5 6.9e-112 402.1
Lac3g0633 . 202 363 WRKY Transcription Factor Family AT1G62300 57.0 2.6e-42 171.0
Lac12g0572 . 263 351 WRKY Transcription Factor Family AT1G18860 76.4 3.1e-37 154.1
Lac12g0754 . 20 300 WRKY Transcription Factor Family AT3G58710 54.4 3.4e-51 199.5
Lac1g3492 . 88 259 WRKY Transcription Factor Family AT1G29860 57.6 1.2e-48 191.0
Lac12g0876 . 145 237 WRKY Transcription Factor Family AT1G29860 81.7 5.2e-39 159.1
Lac9g2256 . 148 295 WRKY Transcription Factor Family AT1G29860 52.1 8.3e-37 151.8
Lac4g2208 . 1 348 WRKY Transcription Factor Family AT5G28650 53.2 3.2e-80 296.2
Lac9g1320 . 181 287 WRKY Transcription Factor Family AT5G28650 72.0 1.9e-40 164.1
Lac7g1265 . 118 216 WRKY Transcription Factor Family AT5G13080 83.8 2.8e-44 175.6
Lac8g0090 . 74 170 WRKY Transcription Factor Family AT5G13080 81.4 2.9e-41 165.6
Lac3g0633 . 202 307 WRKY Transcription Factor Family AT1G68150 75.5 9.7e-41 165.2
Lac10g0367 . 256 341 WRKY Transcription Factor Family AT1G68150 87.2 2.8e-40 163.7
Lac1g3193 . 331 428 WRKY Transcription Factor Family AT1G68150 73.5 3.2e-36 150.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008754 1 1 0 1 0 1 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 1 2 1 34
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22895 PF03106 WRKY 6.60E-26 CL0274 Lac TF