Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0438 | ATGGAGGAAAGTTTTGTTCCTTTTCGAGGAATCAAGAATGACCTGAAGGGGAGGTTGGTTTGTTACAAACAAGACTGGACTGGTGGGTTGAGAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGAGTGCTGACTGCAGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCTATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTAGCAGAGCCTACTGTTATTATGTACACCTTCATGTTTAATTTTGCGAAGGAACGACCTGAGTTGGGCCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCCTAATGGCTATATTAGGAGCTTGCTCCATCATCAATAGGTTCACTCGTCTGGCCGGTGAATTGTTCGGTTTGCTTATCGCAATGCTTTTCATGCAACAAGCGGTCAAAGGACTTGTGGATGAGTTTCGCATCCCTGAACGTGAAAATCCGAAATTGGTCGAGTTTTTACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTGTCATTTGGCCTTCTACTCACTGCTTTAAGGAGTCGAAAAGCACGGTCGTGGCGATATGGATCTGGTTGGCTAAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATATCCTATATACCTTCAAGAAGTGTCCCGCAAGGTATCCCGAGGCGACTCTTCAGCCCGAATCCATGGTCTCCCGGTGCATACGACAATTGGACTGTTATTAAGGATATGCTTGATGTTCCAGTCATTTATATTTGTGGAGCTTTCATCCCGGCGACGATGATTGCGGTGCTTTACTATTTCGACCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGTCTTCTTGGAATTCCTCCATCCAATGGAGTCATCCCACAATCTCCAATGCATACAAAGAGCCTGGCTACTCTCAAACACCAGTTGCTGCGGAATAAACTTGTAGAGACGGCACGGAGTAGTATGAGAAAGAATGCTAGCTTGGGACAGTTGTATGGAAATATGCAAGAAGCATACCATCAAATGCAGACCCCCCTGATCTACCAACAGCCTTCAGCTCGTGGACTGAATGAGCTAAAAGAAACAACCATTCAGGCAGCATCTAGTATGGGCAGTTTCGATGCTCCGGTCGATGAGACAATATTCGACATCGAAAAGGAAATTGATGATCTATTGCCTGTTGAGGTGAAAGAACAGCGTGTCAGTAATTTGCTTCAAGCTACAATGGTGGGAGGATGTGTTGCAGCCATGCCGGTCCTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTTGCCTTTATGGCGATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCGACTTTCGTCGAAACCGTGCCATTCAAATCCATTGCACTTTTTACCATTTTCCAAACTGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCAATTGCTGGGGTCATGTTTCCTCTGATGATCATGCTCCTTGTCCCCGTCAGACAATACCTTCTTCCCAAGTTTTTCAAAGGTGCACATCTCCAAGACCTCGATGCAGCTGAATACGAAGAAGCACCGGCCTTACCGTTCAATCTTGCGACGGAAGCCGAGCTGGGAGCTGGAGCCTCGTTTGGTGGGGATGGAGAGATTTTAGACGAGGTTATCACCCGAAGCCGTGGTGAGTTTAGGCATATTAGCAGTCCTAAAATCACAAGCTCCACGGCAACACCGACATGTGACCGAAAAAGTTTCGACAGCCCTCGTCGCTCTTTCAGCCCTCGGGTGAGCGAGCTAAGAGGAGAGCACAGTCCTCGAGCGGGTGGACGAGGGACACCGGGTCAGAGAAGTGCAGAAGCTAAACCATCCAGTCTTGGAAAGAGCCCTCTTAACACAGCATCAAAGTAG | 2151 | 46.44 | MEESFVPFRGIKNDLKGRLVCYKQDWTGGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAVKGLVDEFRIPERENPKLVEFLPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSRSVPQGIPRRLFSPNPWSPGAYDNWTVIKDMLDVPVIYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGNMQEAYHQMQTPLIYQQPSARGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQATMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRHISSPKITSSTATPTCDRKSFDSPRRSFSPRVSELRGEHSPRAGGRGTPGQRSAEAKPSSLGKSPLNTASK | 716 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4476716 | 4480310 | + | Lag0031076.1 | Lac11g0438 | 586296 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0438 | 716 | MobiDBLite | consensus disorder prediction | 664 | 686 | - | - | |
Lac11g0438 | 716 | MobiDBLite | consensus disorder prediction | 648 | 663 | - | - | |
Lac11g0438 | 716 | MobiDBLite | consensus disorder prediction | 648 | 716 | - | - | |
Lac11g0438 | 716 | PANTHER | ANION EXCHANGE PROTEIN | 4 | 639 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Lac11g0438 | 716 | MobiDBLite | consensus disorder prediction | 698 | 716 | - | - | |
Lac11g0438 | 716 | Pfam | HCO3- transporter integral membrane domain | 460 | 602 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lac11g0438 | 716 | Pfam | HCO3- transporter integral membrane domain | 202 | 373 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lac11g0438 | 716 | Pfam | HCO3- transporter integral membrane domain | 7 | 180 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Lac11g0438 | 716 | FunFam | probable boron transporter 2 | 18 | 60 | - | - | |
Lac11g0438 | 716 | Gene3D | Helical hairpin bin | 18 | 60 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g0452 | Lac-Chr10:3562649 | Lac11g0438 | Lac-Chr11:4476716 | 0.00E+00 | dispersed | |
Lac11g0438 | Lac-Chr11:4476716 | Lac11g0702 | Lac-Chr11:7207509 | 6.90E-205 | dispersed | |
Lac11g0438 | Lac-Chr11:4476716 | Lac6g0673 | Lac-Chr6:5713728 | 5.30E-221 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0438 | K24194 | - | csv:101205388 | 1358.97 |