Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0438 ATGGAGGAAAGTTTTGTTCCTTTTCGAGGAATCAAGAATGACCTGAAGGGGAGGTTGGTTTGTTACAAACAAGACTGGACTGGTGGGTTGAGAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGAGTGCTGACTGCAGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCTATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTAGCAGAGCCTACTGTTATTATGTACACCTTCATGTTTAATTTTGCGAAGGAACGACCTGAGTTGGGCCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCCTAATGGCTATATTAGGAGCTTGCTCCATCATCAATAGGTTCACTCGTCTGGCCGGTGAATTGTTCGGTTTGCTTATCGCAATGCTTTTCATGCAACAAGCGGTCAAAGGACTTGTGGATGAGTTTCGCATCCCTGAACGTGAAAATCCGAAATTGGTCGAGTTTTTACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTGTCATTTGGCCTTCTACTCACTGCTTTAAGGAGTCGAAAAGCACGGTCGTGGCGATATGGATCTGGTTGGCTAAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATATCCTATATACCTTCAAGAAGTGTCCCGCAAGGTATCCCGAGGCGACTCTTCAGCCCGAATCCATGGTCTCCCGGTGCATACGACAATTGGACTGTTATTAAGGATATGCTTGATGTTCCAGTCATTTATATTTGTGGAGCTTTCATCCCGGCGACGATGATTGCGGTGCTTTACTATTTCGACCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGTCTTCTTGGAATTCCTCCATCCAATGGAGTCATCCCACAATCTCCAATGCATACAAAGAGCCTGGCTACTCTCAAACACCAGTTGCTGCGGAATAAACTTGTAGAGACGGCACGGAGTAGTATGAGAAAGAATGCTAGCTTGGGACAGTTGTATGGAAATATGCAAGAAGCATACCATCAAATGCAGACCCCCCTGATCTACCAACAGCCTTCAGCTCGTGGACTGAATGAGCTAAAAGAAACAACCATTCAGGCAGCATCTAGTATGGGCAGTTTCGATGCTCCGGTCGATGAGACAATATTCGACATCGAAAAGGAAATTGATGATCTATTGCCTGTTGAGGTGAAAGAACAGCGTGTCAGTAATTTGCTTCAAGCTACAATGGTGGGAGGATGTGTTGCAGCCATGCCGGTCCTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTTGCCTTTATGGCGATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCGACTTTCGTCGAAACCGTGCCATTCAAATCCATTGCACTTTTTACCATTTTCCAAACTGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCAATTGCTGGGGTCATGTTTCCTCTGATGATCATGCTCCTTGTCCCCGTCAGACAATACCTTCTTCCCAAGTTTTTCAAAGGTGCACATCTCCAAGACCTCGATGCAGCTGAATACGAAGAAGCACCGGCCTTACCGTTCAATCTTGCGACGGAAGCCGAGCTGGGAGCTGGAGCCTCGTTTGGTGGGGATGGAGAGATTTTAGACGAGGTTATCACCCGAAGCCGTGGTGAGTTTAGGCATATTAGCAGTCCTAAAATCACAAGCTCCACGGCAACACCGACATGTGACCGAAAAAGTTTCGACAGCCCTCGTCGCTCTTTCAGCCCTCGGGTGAGCGAGCTAAGAGGAGAGCACAGTCCTCGAGCGGGTGGACGAGGGACACCGGGTCAGAGAAGTGCAGAAGCTAAACCATCCAGTCTTGGAAAGAGCCCTCTTAACACAGCATCAAAGTAG 2151 46.44 MEESFVPFRGIKNDLKGRLVCYKQDWTGGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAVKGLVDEFRIPERENPKLVEFLPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSRSVPQGIPRRLFSPNPWSPGAYDNWTVIKDMLDVPVIYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGNMQEAYHQMQTPLIYQQPSARGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQATMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRHISSPKITSSTATPTCDRKSFDSPRRSFSPRVSELRGEHSPRAGGRGTPGQRSAEAKPSSLGKSPLNTASK 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4476716 4480310 + Lag0031076.1 Lac11g0438 586296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0438 716 MobiDBLite consensus disorder prediction 664 686 - -
Lac11g0438 716 MobiDBLite consensus disorder prediction 648 663 - -
Lac11g0438 716 MobiDBLite consensus disorder prediction 648 716 - -
Lac11g0438 716 PANTHER ANION EXCHANGE PROTEIN 4 639 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Lac11g0438 716 MobiDBLite consensus disorder prediction 698 716 - -
Lac11g0438 716 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac11g0438 716 Pfam HCO3- transporter integral membrane domain 202 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac11g0438 716 Pfam HCO3- transporter integral membrane domain 7 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac11g0438 716 FunFam probable boron transporter 2 18 60 - -
Lac11g0438 716 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0452 Lac-Chr10:3562649 Lac11g0438 Lac-Chr11:4476716 0.00E+00 dispersed
Lac11g0438 Lac-Chr11:4476716 Lac11g0702 Lac-Chr11:7207509 6.90E-205 dispersed
Lac11g0438 Lac-Chr11:4476716 Lac6g0673 Lac-Chr6:5713728 5.30E-221 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0438 K24194 - csv:101205388 1358.97