Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0445 | ATGGCAGCCATGGCTCTTTCATCTACCTTCACAGGAAAAGCTGTTCCTTTGAATGCACCAACCGAGCTGTCTTCCTCGGTTCGCAGCAACGGGAGAGTTTCAATGAGGAAATCTGGAAAGCCAGCATCTTCCTCGGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCACCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCTGGTCTATCAGCTGACCCCGAGACCTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATGTCAAGTAGTCCTGATGGGTGCAGTTGAAGGTTACCGAATTGCTGGAGGACCACTTGGAGAAATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTCGGGCTGGCCGATGATCCAGAGGCGTTTGCAGAGCTTAAGGTAAAAGAACTTAAGAACGGCCGGCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCATTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA | 798 | 49.62 | MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4584187 | 4584984 | - | Lag0031083.1 | Lac11g0445 | 586303 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0445 | 265 | MobiDBLite | consensus disorder prediction | 21 | 47 | - | - | |
Lac11g0445 | 265 | Pfam | Chlorophyll A-B binding protein | 65 | 232 | IPR022796 | - | |
Lac11g0445 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 3 | 265 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Lac11g0445 | 265 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 56 | 258 | - | - | |
Lac11g0445 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - | |
Lac11g0445 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Lac11g0445 | 265 | MobiDBLite | consensus disorder prediction | 21 | 45 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0445 | Lac-Chr11:4584187 | Lac1g3495 | Lac-Chr1:54257968 | 2.50E-136 | dispersed | |
Lac11g0445 | Lac-Chr11:4584187 | Lac5g1661 | Lac-Chr5:33724674 | 2.80E-95 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0445 | K08912 | - | csv:101203342 | 525.013 |