Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0454 | ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGGCGAGTCTACAAAGGTCTGGATTTGGAGAATGGGGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAACATTGCTCAAGAGGACCTCAACATTATCATGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTGAAAACGAAGACTCACCTTCACATAATACTTGAGTATGTGGAGAACGGATCACTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTTCTCAGGTTTTGGAAGGCTTGGTGTATCTACATGAGCAAGGTGTAATTCATCGAGATATAAAGGGTGCAAACATACTGACAACCAAAGAGGGTCTTGTGAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAGGCCGATGTTAATACACATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCCGACATATGGAGTGTTGGATGTACTGTGATCGAACTACTTACATGCGTACCTCCATATTATGATCTACAACCTATGCCCGCTCTTTTTCGCATTGTACAGGACAAGCATCCTCCAATTCCGGATAGCCTATCACCAGACATCACTGATTTTCTACGCCAGTGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCGAAAACTTTGCTTTCTCATCCTTGGATACTGAACTGTCGACGGGCTTTGCATTCTTCTCTTCGTCATAGTGGCACATTGAGAAACGCTCAACAAGATGGATCAACTGAAGCAGAAATCTCTAGTGGAGACAATCAAAACTCTTGTGAAAGCCCTTCGGCAGAGAAAAATGAAGTTGCTGATTCTGATTTGAAAGCTGATTCGAGGAAGGAGTTGTCATCAGATGTTGCCACTGATACAAGCAAGTCCCAAAAAAATTTTGCTTCAGGCCCCAATTTTGTTGAGGAAGGAGAAAGCCTAGAAGAAGATACCCTATTGGATCAAGTTCCTACCTTATCTATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAGACTTGCTACCTCTGAGCCAACTGAGTTTCATGAATCTCATGGTAGAGCCCATGATGAAGTGAAAATGAATGGTGAAGCTCCATTGGCAGAATTAAAAAAAGATGCTTCTAGAAAACATGGAGAGAAAGAAACTTCTACAACATCTGGAAGTAGATCATTTGGTTTTGGACCTGAAAGTCAAGATAATAGTTTTGAAAAGGTTTCAAAGATGTCAATTGCTTTGGGAGGAAATGAGCTGAGTAAATTTAGCGACACTCCTGGAGATGCATCCTTAGATGATTTATTTCAACCTTTAGATAAGCTCCCTGGGGGTCAAGCTGCTGAAGCATCAACATCTTTATCTACCCCACAATCAAACATAGGTAATGTGCCAGTAAATGATGTTGGGAGAAATGACCTGGCCACAAAGTTGAGGGCTACAATTGCTCAAAAACAAATGGAAAATGAAATGGGACAGGCAAATGGTGGGGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCCGGAGAAAACCTTTATCCTTTGCAGGCGGTTGAATTTGGCAGATTAGTTGGTTCATTGAGGCCTGATGAACCCGAAGATATAATTGTATCTGCCTGTCAAAAACTGATTGCCATTTTCCATCAAAGACCTGAGCAGAAAATTGTTTATGTTACACAACATGGTCTACTCCCATTAACAGAGTTGCTTGAAGTTCCAAAAACTCGTATTATATGTTCGGTGCTCCAGCTTATCAATCAGATAGTTAGGGATAACGTTGACTTCCAAGAAAACGCCTGTCTTGTTGGTCTGATTCCTCTGGTGATGGGCTTTGCGGTTCCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCATGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCTGATTATGCAAAGTACAGGGAAATGGTTCACCTAGCTATCGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTCGAAATGGTTTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACTCTGTACAGCTTGAATGAGGCAACTCGCTTAGCTTCCATAACAGTTGGGGCTGGATATCCAGTTGATGGTTTAACTCAACGTCCCCGGTCAGGTCAACTAGATCCTACCCACCCTATATTCAGTCAGTATGAGGCCTCATTTCCTGTACATGATCAGCCTGATCTTTTGAAAGGCAGGCATGGAATAGTTGATCATCACCTGTCTACTGGAACACCAGAACCTTCTAGGGCTTCAACTTCAAATTCTCAAAGATCAGATGCCATTCAATCCGATCACCGACACTTTTCCGCAGAGGCTGATAGGCCTCAATCAAGCAATACCACAAATGAAGCCTTGGGAACTTCTAAACCGTCAGAGCTAGCATCTTTAGAAAAAGTTGTTAATTTAGCAACCAAGGAACCGTCTGGCTCTGCTTCTAAAGAACATGAAAATGTAGATAGATGGCGAACTGAGCGGGTGGCCAATTCTAACAGGACTTCCACAGATAGGCCTCCAAAATTGGTGGAACCTGCATCTAATGGTTTTCCTACAGCATTGTCGGCTACTCAGCAAGAGCAAGTTCGGCCCCTTCTAAGTCTGTTGGACAAAGAACCCCCTTCTCGACATTTTTCCGGTCAGCTTGAGTACATGCGCCACCTTTCTGGATTGGAGAGACATGAAACTATTATGCCTCTATTGCATGCATCAAATGAAAAGAAGATAAATGGGGAGCATGATTTCTTAATGGCAGAATTCGCTGATGTTTCTCAACGTGGAAAAGACAATGGAAATCTTGACCCCACTTCTAAGGTGTCTCTTAAAACGGTGGCAAAGAAGGTAGGATCCCTAGTGTCCAATGAAGGAGCTGCATCCACATCTGGAATTGCTTCACAGACGGCATCTGGGGTACTTTCAGGTTCAGGCGTATTAAATGCTAGACCAGGGAGTGCAACATCATCTGGACTTCTTTCGCACATGGTTTCAAGTTTGAATGCTGATGTCGCAAGGGAATACCTGGCGAAGGTGGCTGATCTTCTGCTCGAATTTGCTCAGGCAGATACGACTGTGAAGTCATATATGTGCAGCCAAAGCTTGCTTAATCGCCTTTTTCAGATGTTCAATAGGGTAGAGCCCCCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCAAACCTTGAACTCAAAGAAGGGTCTCTGGTATCGCAAATACATACTGAGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGGCAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTAATGCATTTTATTATATCAGACTCTCCTCTGAGAAAAGATGCGTTGCCTCTACTGTGCGATATGGCCCATGCATCTCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGATTAGATGTGTATTTGAGCCTACTAGACGATGAGCTTTGGTCTGTCACGGCATTGGATTCAATTGCTGTTTGCTTGGCTCATGACAATGACAACCGAAAAGTTGAACAGGCTTTGCTGAAAAGGATGCAGTTCAGAAATTGTGCCCTTCCACAACTGTCCATAGAGATTAGTACTGTTGTGCTGCGAGGAGGATGCCAAATGGCTTGTGAGAGTTCCTGTGGAGAAAAATCCAGAGTTTCCAAGGCACCAAAACCAAGAGTCTTCAGTATTATTTATGGAGAAATTGGACGCTGCAGTACCTTTGATATTTTAGCTCATATCAATATTAACTGGACATGTAATTCTAATTGCAGAAAATCTTCCCGAATCAATACGACATTGGCTGTCAATGGATTAACCCCATTGCTTATAGCAAGGCTGGACCATCAGGATGCGATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCTGTGTATGAGCATCATCCACGACCCAAACAATTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGAGATGGACAACGGTCTGGTGGGCAAGTGTTGGTGAAACAAATGGCTACATCTCTGCTTAAAGCACTTCATATAAATACCGTTTTGTAA | 4392 | 42.21 | MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWILNCRRALHSSLRHSGTLRNAQQDGSTEAEISSGDNQNSCESPSAEKNEVADSDLKADSRKELSSDVATDTSKSQKNFASGPNFVEEGESLEEDTLLDQVPTLSIHENSSLLTGSGRLATSEPTEFHESHGRAHDEVKMNGEAPLAELKKDASRKHGEKETSTTSGSRSFGFGPESQDNSFEKVSKMSIALGGNELSKFSDTPGDASLDDLFQPLDKLPGGQAAEASTSLSTPQSNIGNVPVNDVGRNDLATKLRATIAQKQMENEMGQANGGGDLLRLVMGVLKDDDIDIDGLVFDEKLPGENLYPLQAVEFGRLVGSLRPDEPEDIIVSACQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVRDNVDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYREMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGYPVDGLTQRPRSGQLDPTHPIFSQYEASFPVHDQPDLLKGRHGIVDHHLSTGTPEPSRASTSNSQRSDAIQSDHRHFSAEADRPQSSNTTNEALGTSKPSELASLEKVVNLATKEPSGSASKEHENVDRWRTERVANSNRTSTDRPPKLVEPASNGFPTALSATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRHLSGLERHETIMPLLHASNEKKINGEHDFLMAEFADVSQRGKDNGNLDPTSKVSLKTVAKKVGSLVSNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLRKDALPLLCDMAHASRNSREQLRAHGGLDVYLSLLDDELWSVTALDSIAVCLAHDNDNRKVEQALLKRMQFRNCALPQLSIEISTVVLRGGCQMACESSCGEKSRVSKAPKPRVFSIIYGEIGRCSTFDILAHININWTCNSNCRKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL | 1463 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4736736 | 4758047 | + | Lag0031092.1 | Lac11g0454 | 586312 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0454 | 1463 | SMART | serkin_6 | 20 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | PANTHER | ARMADILLO REPEAT-CONTAINING PROTEIN 3 | 304 | 1463 | IPR052441 | - | |
Lac11g0454 | 1463 | Pfam | Protein kinase domain | 20 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 283 | 349 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 313 | 333 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 834 | 849 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 863 | 879 | - | - | |
Lac11g0454 | 1463 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 133 | 145 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 277 | IPR011009 | - | |
Lac11g0454 | 1463 | FunFam | MAP3K epsilon protein kinase 1 | 1072 | 1219 | - | - | |
Lac11g0454 | 1463 | Gene3D | Transferase(Phosphotransferase) domain 1 | 17 | 308 | - | - | |
Lac11g0454 | 1463 | PRINTS | Tyrosine kinase catalytic domain signature | 127 | 145 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | PRINTS | Tyrosine kinase catalytic domain signature | 89 | 102 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | PRINTS | Tyrosine kinase catalytic domain signature | 193 | 215 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | PRINTS | Tyrosine kinase catalytic domain signature | 236 | 258 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 899 | 916 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 283 | 312 | - | - | |
Lac11g0454 | 1463 | ProSitePatterns | Protein kinases ATP-binding region signature. | 26 | 49 | IPR017441 | GO:0005524(InterPro) | |
Lac11g0454 | 1463 | SMART | arm_5 | 609 | 649 | IPR000225 | GO:0005515(InterPro) | |
Lac11g0454 | 1463 | SMART | arm_5 | 694 | 737 | IPR000225 | GO:0005515(InterPro) | |
Lac11g0454 | 1463 | SMART | arm_5 | 1150 | 1194 | IPR000225 | GO:0005515(InterPro) | |
Lac11g0454 | 1463 | SMART | arm_5 | 1196 | 1235 | IPR000225 | GO:0005515(InterPro) | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 466 | 510 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 389 | 428 | - | - | |
Lac11g0454 | 1463 | FunFam | MAP3K epsilon protein kinase 1 | 571 | 779 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 490 | 508 | - | - | |
Lac11g0454 | 1463 | FunFam | MAP3K epsilon protein kinase 1 | 17 | 299 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 373 | 445 | - | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 429 | 445 | - | - | |
Lac11g0454 | 1463 | Gene3D | - | 575 | 778 | IPR011989 | - | |
Lac11g0454 | 1463 | Gene3D | - | 1059 | 1294 | IPR011989 | - | |
Lac11g0454 | 1463 | SUPERFAMILY | ARM repeat | 582 | 1281 | IPR016024 | - | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 827 | 935 | - | - | |
Lac11g0454 | 1463 | ProSiteProfiles | Protein kinase domain profile. | 20 | 267 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g0454 | 1463 | MobiDBLite | consensus disorder prediction | 373 | 388 | - | - | |
Lac11g0454 | 1463 | CDD | STKc_Cdc7_like | 19 | 267 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0454 | Lac-Chr11:4736736 | Lac12g2311 | Lac-Chr12:40265493 | 8.60E-61 | dispersed | |
Lac11g0454 | Lac-Chr11:4736736 | Lac11g0043 | Lac-Chr11:370305 | 1.80E-50 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85727 | PF00069 | Pkinase | 1.30E-67 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0454 | - | - | - | 0.0 |