Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0476 ATGTTCAGCTCCGGCAACGTCACCGTCATCTCCTCCGGTGCATTCCCGTCCCGGAGATCAGTTCCATGGCAACTCTTGTCCCTTCCGGACATCCAGATTTTGGAAATCTTCATTGCAATATCTGTTTTTACAGCAATAAAATTATTAAGGCAGAGGAGAAAACAGGGGCTACCTGTGTGGCCGGTCGTCGGAATGCTACCGTCTTTAGTCGCGGGACTCCGAAGCAACCTGTATGAATGGATCACCGAAGTGCTGTACCATCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTTAGTAGCTTGAATTGTGTTGTAACTTCAGACCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCCCCTGTACCCAAAAGGCTCCTTCTTCCGCGACACAGTCCGAGACCTACTTGGCGACGGAATCTTCAACGCCGACGGTGAGATTTGGCACCGGCAGAGAAAGACGGCGAGCATCGAATTTCACTCAACAAAGTTCCGGCGACTCACTGTGGAGTCTCTTCACGAGTTAGTCCACTCTCGGCTCCTCCCTGTTTTACACAGGCATTTCGTCGAACACTTGGTGCCAATCGATCTCCAAGACATTCTTCTCCGCCTAACTTTCGACAATGTCTGTATGATCGCATTCGGCGTCGATCCCGGCTGTTTGAGCCCTAATTTACCGGCGATTCCATTCGCCAACGCCTTCGAGGCGGCGACGGAAGCCACTGTCCTTCGATTCGTAACTCCAAATTTCATATGGAAAACAATGAGGTATTTCAATTTAGGGACAGAAAAGAGTTTCAAATGTGCCCTAAAAGAGGTCAATCAATTCGCGGAGAACGTAATTGAAAAGAGGAAAAAGGAAAAAATCAATGAAATCGAGAGATCGGACCTGTTGTCGGTGTTCATGGGACTGAAGGACGAGAACGGAGAGCCGTTTTCGGACAAGTTCTTGAAAGATATCTGCGTGAATTTCATACTTGCCGGAAGAGATACCTCGTCGGTGGCGTTGAGTTGGTTCTTTTGGCTGATTGATCGGAATCCGGAGGTGGAAGAGAGGATTCTGGAGGAGATATGCCGGATATTGGAAATGAGAGGAGAGACGGCGGCGGCGGCGGTGGAATCTTCGGCCGGCGATGTGGCGTTCGAAGTAGAAGAGATAAAGAAGATGGAATATTTGCAGGCAGCTCTGTCTGAAGCTCTGAGACTGTTCCCTTCTGTGCCTGTTGATCATAAGGAGGTTATAGAAGATGATATCTTACCAGATGGAACAGAGCTAAAGGAAGGAACAAAAGTGATCTATGCAATATATGCAATGGGCAGAATGGAGGCCATATGGGGGAAAGATTGTAGAGAATTCAAGCCAGAGAGATGGTTGAGAGACGGTCGGTTTGTAGCCGAGTCGGCGTATCGGTTCACCGCCTTCAACGGTGGGCCTCGGCTGTGCTTGGGGAAGGACTTTGCCTACTACCAAATGAAGTACACCGCCGCCACCGTCGTCCTCCGCTACCGTGTGAGGGTGGCAGAGAAGCACCCTGTGGTGCCAAAACTTGCCTTGACAATGTACATGAAGCATGGCTTGAAGGTGAACTTGTTTAAACGTGAGAAGGAAGAGCTACAGAAGTATTTCAAAAGTAAATAA 1644 48.54 MFSSGNVTVISSGAFPSRRSVPWQLLSLPDIQILEIFIAISVFTAIKLLRQRRKQGLPVWPVVGMLPSLVAGLRSNLYEWITEVLYHQNGTFRFKGPWFSSLNCVVTSDPRNIEHILKTEFPLYPKGSFFRDTVRDLLGDGIFNADGEIWHRQRKTASIEFHSTKFRRLTVESLHELVHSRLLPVLHRHFVEHLVPIDLQDILLRLTFDNVCMIAFGVDPGCLSPNLPAIPFANAFEAATEATVLRFVTPNFIWKTMRYFNLGTEKSFKCALKEVNQFAENVIEKRKKEKINEIERSDLLSVFMGLKDENGEPFSDKFLKDICVNFILAGRDTSSVALSWFFWLIDRNPEVEERILEEICRILEMRGETAAAAVESSAGDVAFEVEEIKKMEYLQAALSEALRLFPSVPVDHKEVIEDDILPDGTELKEGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRFVAESAYRFTAFNGGPRLCLGKDFAYYQMKYTAATVVLRYRVRVAEKHPVVPKLALTMYMKHGLKVNLFKREKEELQKYFKSK 547
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 4952055 4955289 - Lag0031114.1 Lac11g0476 586334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0476 547 Pfam Cytochrome P450 57 521 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 FunFam Cytochrome P450 48 538 - -
Lac11g0476 547 CDD CYP86A 92 528 - -
Lac11g0476 547 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 SUPERFAMILY Cytochrome P450 56 535 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0476 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g0476 547 PANTHER CYTOCHROME P450 47 528 - -
Lac11g0476 547 Gene3D Cytochrome P450 52 546 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2284 Lac-Chr10:34921126 Lac11g0476 Lac-Chr11:4952055 2.90E-104 dispersed
Lac11g0476 Lac-Chr11:4952055 Lac11g2077 Lac-Chr11:36645245 1.00E-123 dispersed
Lac11g0476 Lac-Chr11:4952055 Lac4g2600 Lac-Chr4:45092971 9.60E-215 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0476 K15402 - vvi:100254406 758.059