Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac11g0476 | ATGTTCAGCTCCGGCAACGTCACCGTCATCTCCTCCGGTGCATTCCCGTCCCGGAGATCAGTTCCATGGCAACTCTTGTCCCTTCCGGACATCCAGATTTTGGAAATCTTCATTGCAATATCTGTTTTTACAGCAATAAAATTATTAAGGCAGAGGAGAAAACAGGGGCTACCTGTGTGGCCGGTCGTCGGAATGCTACCGTCTTTAGTCGCGGGACTCCGAAGCAACCTGTATGAATGGATCACCGAAGTGCTGTACCATCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTTAGTAGCTTGAATTGTGTTGTAACTTCAGACCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCCCCTGTACCCAAAAGGCTCCTTCTTCCGCGACACAGTCCGAGACCTACTTGGCGACGGAATCTTCAACGCCGACGGTGAGATTTGGCACCGGCAGAGAAAGACGGCGAGCATCGAATTTCACTCAACAAAGTTCCGGCGACTCACTGTGGAGTCTCTTCACGAGTTAGTCCACTCTCGGCTCCTCCCTGTTTTACACAGGCATTTCGTCGAACACTTGGTGCCAATCGATCTCCAAGACATTCTTCTCCGCCTAACTTTCGACAATGTCTGTATGATCGCATTCGGCGTCGATCCCGGCTGTTTGAGCCCTAATTTACCGGCGATTCCATTCGCCAACGCCTTCGAGGCGGCGACGGAAGCCACTGTCCTTCGATTCGTAACTCCAAATTTCATATGGAAAACAATGAGGTATTTCAATTTAGGGACAGAAAAGAGTTTCAAATGTGCCCTAAAAGAGGTCAATCAATTCGCGGAGAACGTAATTGAAAAGAGGAAAAAGGAAAAAATCAATGAAATCGAGAGATCGGACCTGTTGTCGGTGTTCATGGGACTGAAGGACGAGAACGGAGAGCCGTTTTCGGACAAGTTCTTGAAAGATATCTGCGTGAATTTCATACTTGCCGGAAGAGATACCTCGTCGGTGGCGTTGAGTTGGTTCTTTTGGCTGATTGATCGGAATCCGGAGGTGGAAGAGAGGATTCTGGAGGAGATATGCCGGATATTGGAAATGAGAGGAGAGACGGCGGCGGCGGCGGTGGAATCTTCGGCCGGCGATGTGGCGTTCGAAGTAGAAGAGATAAAGAAGATGGAATATTTGCAGGCAGCTCTGTCTGAAGCTCTGAGACTGTTCCCTTCTGTGCCTGTTGATCATAAGGAGGTTATAGAAGATGATATCTTACCAGATGGAACAGAGCTAAAGGAAGGAACAAAAGTGATCTATGCAATATATGCAATGGGCAGAATGGAGGCCATATGGGGGAAAGATTGTAGAGAATTCAAGCCAGAGAGATGGTTGAGAGACGGTCGGTTTGTAGCCGAGTCGGCGTATCGGTTCACCGCCTTCAACGGTGGGCCTCGGCTGTGCTTGGGGAAGGACTTTGCCTACTACCAAATGAAGTACACCGCCGCCACCGTCGTCCTCCGCTACCGTGTGAGGGTGGCAGAGAAGCACCCTGTGGTGCCAAAACTTGCCTTGACAATGTACATGAAGCATGGCTTGAAGGTGAACTTGTTTAAACGTGAGAAGGAAGAGCTACAGAAGTATTTCAAAAGTAAATAA | 1644 | 48.54 | MFSSGNVTVISSGAFPSRRSVPWQLLSLPDIQILEIFIAISVFTAIKLLRQRRKQGLPVWPVVGMLPSLVAGLRSNLYEWITEVLYHQNGTFRFKGPWFSSLNCVVTSDPRNIEHILKTEFPLYPKGSFFRDTVRDLLGDGIFNADGEIWHRQRKTASIEFHSTKFRRLTVESLHELVHSRLLPVLHRHFVEHLVPIDLQDILLRLTFDNVCMIAFGVDPGCLSPNLPAIPFANAFEAATEATVLRFVTPNFIWKTMRYFNLGTEKSFKCALKEVNQFAENVIEKRKKEKINEIERSDLLSVFMGLKDENGEPFSDKFLKDICVNFILAGRDTSSVALSWFFWLIDRNPEVEERILEEICRILEMRGETAAAAVESSAGDVAFEVEEIKKMEYLQAALSEALRLFPSVPVDHKEVIEDDILPDGTELKEGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRFVAESAYRFTAFNGGPRLCLGKDFAYYQMKYTAATVVLRYRVRVAEKHPVVPKLALTMYMKHGLKVNLFKREKEELQKYFKSK | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4952055 | 4955289 | - | Lag0031114.1 | Lac11g0476 | 586334 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac11g0476 | 547 | Pfam | Cytochrome P450 | 57 | 521 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | FunFam | Cytochrome P450 | 48 | 538 | - | - | |
| Lac11g0476 | 547 | CDD | CYP86A | 92 | 528 | - | - | |
| Lac11g0476 | 547 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | E-class P450 group I signature | 395 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | P450 superfamily signature | 396 | 407 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | PRINTS | P450 superfamily signature | 483 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | SUPERFAMILY | Cytochrome P450 | 56 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac11g0476 | 547 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 476 | 485 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac11g0476 | 547 | PANTHER | CYTOCHROME P450 | 47 | 528 | - | - | |
| Lac11g0476 | 547 | Gene3D | Cytochrome P450 | 52 | 546 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g2284 | Lac-Chr10:34921126 | Lac11g0476 | Lac-Chr11:4952055 | 2.90E-104 | dispersed | |
| Lac11g0476 | Lac-Chr11:4952055 | Lac11g2077 | Lac-Chr11:36645245 | 1.00E-123 | dispersed | |
| Lac11g0476 | Lac-Chr11:4952055 | Lac4g2600 | Lac-Chr4:45092971 | 9.60E-215 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac11g0476 | K15402 | - | vvi:100254406 | 758.059 |