Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0531 ATGGTGATGAGCACAGCATGCTCGGGAGAAAAGAACGACGCAGAAAGAATACGATATTTAGTGAAGGAAGCAATGGAGGTACTTACAAAGATATGCTTTGGAGATGTATTGGGGCCATTGAAGAATTTGGGATTCTTGCTTTATGGGAAGAGGGCTCTTGATGTTGGCAGAAGTTCTGATGAACTAATGGAGAACATCTTGAAGGAACATGAAGAAGAAAGTGATGAAAAGAACCCAAAGGATTTGATGGATATTCTCTTGGAAATTCACCAACATGATAATGTTGCAGTTAAGATCACAAGAACCCATATCAAAGCATTTATTATGGATCTCTTCATGGCCGGTACTGACACTTCGTCAGTAGCCATGCAATGGACAATGGCTGAACTCATCAACCATCCTCAAGTGTTCAAAAGGGTTAGAGAGGAGATTGAATCAGTGGTTGGAACATCAGGACGACTTGTAGAAGAAGAAGACATCCCTCAACTCCCTTATTTGCAAGCTGTTGTAAAAGAAACTTTGAGGCTCCACCCACCAGCCCCAGTTACAATAAGAGAATGTCGTCAAAGTTGCAAAATTAGAGGCTATGATGTGCCACAAAAGACAAGTGTGGCAGTCAATCTCTATGCTATCATGAGAGACCCAGAAGTGTGGAGTGAACCAAACGAATTTCGTCCGGAGAGGTTTTTGACTTCGTCGAATCGAGAGATAGATTCAAACTCGAACCAAATGGAGACCAAGGGACAGAGTTTCGACTTCATTCCGTTTGGGGGTGGAAGGAGAGCATGCCCCGGTGCGACGTTGGCATTTAACATGATGAACACAACAATGGCAGCCCTAGTTCAGTGCTTTGATTGGAAGGTGGTTGGAGATGGAAGTGGGGAAGAAGCTAAGGTTGATATGAGACCAGGACAAGGCTTGACTTTAGGCATGGCCAACCCTCTTTTGCTTGTTCCTATTTTACATTTTGATGCATTTGGTGCTTCAATACATAATTAA 999 43.04 MVMSTACSGEKNDAERIRYLVKEAMEVLTKICFGDVLGPLKNLGFLLYGKRALDVGRSSDELMENILKEHEEESDEKNPKDLMDILLEIHQHDNVAVKITRTHIKAFIMDLFMAGTDTSSVAMQWTMAELINHPQVFKRVREEIESVVGTSGRLVEEEDIPQLPYLQAVVKETLRLHPPAPVTIRECRQSCKIRGYDVPQKTSVAVNLYAIMRDPEVWSEPNEFRPERFLTSSNREIDSNSNQMETKGQSFDFIPFGGGRRACPGATLAFNMMNTTMAALVQCFDWKVVGDGSGEEAKVDMRPGQGLTLGMANPLLLVPILHFDAFGASIHN 332
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 5494181 5495378 - Lag0031169.1 Lac11g0531 586389
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0531 332 FunFam Predicted protein 112 317 - -
Lac11g0531 332 SUPERFAMILY Cytochrome P450 2 318 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 Gene3D Cytochrome P450 1 315 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS P450 superfamily signature 263 274 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS P450 superfamily signature 114 131 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS P450 superfamily signature 254 263 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 Pfam Cytochrome P450 10 292 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 256 265 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g0531 332 PRINTS E-class P450 group I signature 207 231 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS E-class P450 group I signature 263 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS E-class P450 group I signature 103 120 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS E-class P450 group I signature 123 149 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PRINTS E-class P450 group I signature 167 185 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0531 332 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 319 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2550 Lac-Chr10:39480771 Lac11g0531 Lac-Chr11:5494181 4.60E-61 dispersed
Lac11g0531 Lac-Chr11:5494181 Lac11g0534 Lac-Chr11:5510429 1.30E-102 dispersed
Lac11g0531 Lac-Chr11:5494181 Lac11g0533 Lac-Chr11:5498410 4.70E-164 proximal
Lac11g0531 Lac-Chr11:5494181 Lac13g0151 Lac-Chr13:1076732 7.50E-45 wgd
Lac11g0531 Lac-Chr11:5494181 Lac4g2676 Lac-Chr4:45708659 1.10E-96 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0531 K23814 - vvi:100247724 418.698