Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0534 ATGGCGGACGCCGCTCTTCACTACATTCTTTATCTCCTTCTCTTCTTCCTCTCCTCTCTCTTCCTCTTCTTTCTCCTCCAAAAACCGTCGAGATCCGCCTCCGCCGCCGGGAAATTAACTCTCCCGCCGTCTCCGCCGTCGCTGCCTCTGATCGGCCACCTCCACCTCCTCCTCCCGGCGACTCACAGGTCCTTCTTCAACATCTCCTCCAAGTACGGTCCGCTGCTCCACATCCGCCTCGGCGCTCTGCAGTACGTGCTCGTCTCCTCCGCCTCGCTCGCCGCGGAGATCTTCAAAACGCACGATCTGACGTTCTCCTCGCGACCGGATTTCGCCTTCAGCGAGGAGTATCCGTACGGAAAAGTCGGATTCCTGGGCGCTCCGTACGGCGATTACTGGCGGTACATGAAGAAGCTGACGATGATGGAGGTTCTTGCGCCGCCGCAGCTTGCGCGATCGCGATTCGTCAGGAATGAAGAGATCGCTCGTATGCTTCAGAAGTTGCTCCTCTGTTCCAAGAAGAAGGAGTCAGTAGACTTGGGGGCAGAGTTGATCAAGCTCACAAACAACAGCATATGCAGAATGATGATGAGCACAAGATGCTCTGAAGAGAACAACGAAGCAGAGAAGATCAGAGCACTGGTAAACGACACCATTGAAATCGCTACAAAGCTCGCCTTCGGAGATCTCTTCAGCCAAGGTCCATTGAAGAGGCTTCCATTCTGGCTCTTCGGCAAGAAAGCTCTGAACATCAATGTCAGATTCGACGTTCTCTTGGAGAAGATTCTGCAACAGCACGAAGAACGAGCCAAAATTCACGGACTCGAAAGAGACGATCGCGATCTCATGGATATATTGCTGAAAGCGTATTTAGATGAGAGAGCCGAGTTCAAACTCACTAGAAATCACATCAAAGCCTTCCTGCTTGATTTGTTCATCGCCGGCACCGGAACGTCGGCGGAGGTTATGCAGTGGACGATGGCTGAACTAATGAACCATCCTGACGAGTTCCAAAAGGTCCGGCGAGAGATCGAATCGGTCGTCGGAACGAGACTCGTGGAAGAAACGGATATCACGAACCTTCCGTACATGCAAGCGGTGGTGAAGGAATGTCTCCGGCTGTATCCGGCGGTGCCGCAGTCCAGAAGAGCCTGCAGAGAGACGTGCAAGGTGAACGGATACGACATTCCAAAGGACACCATGGTTGCAGTCGACCTGTTTGCGATAATGCGCGATCCAAATCTGTGGGAGAATCCAGACGAATTTCGACCTGAGAGATTCTACAACGCGAATTCAGGCAAGGATGATAGCGATCAAGGAACGAAGCACATTCAGTACGAGATTAAGGGACAGAATTTCAGTTTTGTGCCATTTGGTGGAGGAAGAAGGGGCTGCCCTGGCTCGTTGTTGGCGTTCAACACGATCAACAGGACGGTGGCGGTACTGGTTCAGTGCTTCGATTGGAAGGTTGGGAAAGATGGAAATGGAGAGAAGGTTAACATGGAGATTGGAACTGGAATTAGTTTGCCAATGGCTCATCCTTTGATCTGTGTGCCAGTTTCTCATTCGACACCTTTTGTTGCTTAG 1587 51.92 MADAALHYILYLLLFFLSSLFLFFLLQKPSRSASAAGKLTLPPSPPSLPLIGHLHLLLPATHRSFFNISSKYGPLLHIRLGALQYVLVSSASLAAEIFKTHDLTFSSRPDFAFSEEYPYGKVGFLGAPYGDYWRYMKKLTMMEVLAPPQLARSRFVRNEEIARMLQKLLLCSKKKESVDLGAELIKLTNNSICRMMMSTRCSEENNEAEKIRALVNDTIEIATKLAFGDLFSQGPLKRLPFWLFGKKALNINVRFDVLLEKILQQHEERAKIHGLERDDRDLMDILLKAYLDERAEFKLTRNHIKAFLLDLFIAGTGTSAEVMQWTMAELMNHPDEFQKVRREIESVVGTRLVEETDITNLPYMQAVVKECLRLYPAVPQSRRACRETCKVNGYDIPKDTMVAVDLFAIMRDPNLWENPDEFRPERFYNANSGKDDSDQGTKHIQYEIKGQNFSFVPFGGGRRGCPGSLLAFNTINRTVAVLVQCFDWKVGKDGNGEKVNMEIGTGISLPMAHPLICVPVSHSTPFVA 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5510429 5513467 - Lag0031172.1 Lac11g0534 586392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0534 528 FunFam Cytochrome P450 family protein 33 517 - -
Lac11g0534 528 Gene3D Cytochrome P450 36 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 520 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lac11g0534 528 CDD CYP93 73 519 - -
Lac11g0534 528 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 Pfam Cytochrome P450 42 509 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 SUPERFAMILY Cytochrome P450 38 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g0534 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0531 Lac-Chr11:5494181 Lac11g0534 Lac-Chr11:5510429 1.30E-102 dispersed
Lac11g0532 Lac-Chr11:5497655 Lac11g0534 Lac-Chr11:5510429 3.60E-36 dispersed
Lac11g0534 Lac-Chr11:5510429 Lac4g2676 Lac-Chr4:45708659 1.90E-183 dispersed
Lac2g2819 Lac-Chr2:44071189 Lac11g0534 Lac-Chr11:5510429 4.50E-29 dispersed
Lac11g0533 Lac-Chr11:5498410 Lac11g0534 Lac-Chr11:5510429 1.70E-160 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0534 K23814 - csv:101210137 919.842