Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0581 ATGGAGAAGAAGACCTATCCGATAGGTGAAGATTTTTACGTTCTGTATGAGGAGGTTGGGCAGGGGGTGAGTGCTGCGGTTCACCGTGCTCTGTGTAAACCTCTTAACGAGATCGTCGCCGTTAAGATCCTCGATTTTGAGCGTGAGAATTGTGATCTGGTTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGATCACCCGAATGTCCTTAAATCACACTGCTCCTTTGTCAATGGCCATAATTTGTGGATTGTTATGCCCTACATGGCTGGGGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAATATTACGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATAAAAGCAGGTAATGTTCTCATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCATGCCTTTTTGATTCAGGTGATAGGCAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTTTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAATGCACCTCCAGGCCTTGATTATGAGAGAGATAGAAAATTTTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAAGCAAGCCCGTTCAAGTGATTATATTGCACGTACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCGCTTAAGAGAAAGGAAGAAGATATGCTTGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTGTCACAGAATGAATATAAACGAGGAATTAGTGGATGGAACTTCAATCTCGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAATCCATAAGTGAAATCAGTGAAGGAGGGAGCTCAAATTCCTTATGTGCTCTTGATGTGCAAGAAAAGAGATTACAATGCCAAAATTTTTCAGAAATTTCAGATACTGAAGAGAATGGCTTGCTGCGGAGACAACCCTCCATGAAAATTAATGATACAGTAGATGGTAAAAAGTCTAGCAACGATTCAACTATTACTGGTTCTTCCTCTCAACATCATTCACCCCGCCAAGATAATCAAACTGAGAATGGTTCCAGTGAAGAGCTTTATTTGGAGAACAGCAAAAAATTTTTGGGGAATACTCCTAATACTAGCCAACATAAAAGAAGTATTTCTTCTAATCCCGCTATTCAACAAGAAGGCAGTTCGCCACTGAACAGAAGAGAGAGTTATGAGACAGAGAAGAATGCTGCAAATGGTGGCAGTGTTGCAATAGGAAACACTTCTCAGGCGGTAGATGATGTGCTTTCCGATTCTTATTCTAAAGATTCCAAGTCATCATTAACAAGTCCAGCAACAAATGACGAGGAACAGGACGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACTTCGGAGAATGTTGATGTAGATAAGGCAGTTGCATCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTGATTACCTCGACTCCTGCTACTCCTCTACCTTCTAATCTACCAAGTCCTCTACTGACACCTCTACCTTCATCTGATGCTATTCCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCACAATTGGAGACTTTCCAGCGGAGGGTGTCGTTGATGTCTCAGGGGCACATATAGCAACAATGGAGAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTAATTAACGAAGTAACTGAATTACAGTGGAGATTCAAGAGTTGTTATTTCATGAATTGCACCAAGGTCCTCCAAGAGATTTTGATCCAGTGGGAGTGGTTACACAACATGGCAGGGTTTAGGCTTGGACGATTTGGAAGAGGGTTTGGAATCAGGTTCTGGCGGAGTAAGAGCGGATTCAGGGAGGAAGATCCAAATGCTAAGAGATGTAAACGGATCGATGTGGATATCTTTGGTAGCAACGCCGTCGGTGAACAAAGGATTATCGGAAGCAACGGTTTCCTCGGGTCGAGATGTGACTCCAAAAGGGCTCGATTCGTCAAGTGGAGCTTGGATCAGATTCTGCAGACGATGCTTCAAGAGAAATTTGAAGAACACGCTGTAGAGCTTCACAGCCACGCTTGGCATTTCTCTCGGTCTCCGTTCTCAATCCCTCTCGCTCTCCCTCTCTGTTTCCTTCCCTTTCTCCCTCCCTCCCTCTTCTCTCGTGTTTTCAGAATTCAGAGTAAAAATCGCAGAGCCGAATCGGAAGGAGACGACAAAGATATAATCATGGGTGAATAG 2562 42.58 MEKKTYPIGEDFYVLYEEVGQGVSAAVHRALCKPLNEIVAVKILDFERENCDLVSIYREVQTMILVDHPNVLKSHCSFVNGHNLWIVMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGVEYLHNHGHIHRDIKAGNVLIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEGGSSNSLCALDVQEKRLQCQNFSEISDTEENGLLRRQPSMKINDTVDGKKSSNDSTITGSSSQHHSPRQDNQTENGSSEELYLENSKKFLGNTPNTSQHKRSISSNPAIQQEGSSPLNRRESYETEKNAANGGSVAIGNTSQAVDDVLSDSYSKDSKSSLTSPATNDEEQDEKAKAPVIQQKGRFKVTSENVDVDKAVASPILQKSHSMQVITSTPATPLPSNLPSPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQITIGDFPAEGVVDVSGAHIATMEKSLLEAAHEREKDLINEVTELQWRFKSCYFMNCTKVLQEILIQWEWLHNMAGFRLGRFGRGFGIRFWRSKSGFREEDPNAKRCKRIDVDIFGSNAVGEQRIIGSNGFLGSRCDSKRARFVKWSLDQILQTMLQEKFEEHAVELHSHAWHFSRSPFSIPLALPLCFLPFLPPSLFSRVFRIQSKNRRAESEGDDKDIIMGE 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5908676 5919380 + Lag0031219.1 Lac11g0581 586439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0581 853 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0581 853 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 697 IPR047173 GO:0043539(InterPro)
Lac11g0581 853 MobiDBLite consensus disorder prediction 404 478 - -
Lac11g0581 853 SUPERFAMILY Protein kinase-like (PK-like) 12 275 IPR011009 -
Lac11g0581 853 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Lac11g0581 853 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Lac11g0581 853 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0581 853 Gene3D Transferase(Phosphotransferase) domain 1 94 326 - -
Lac11g0581 853 Coils Coil 657 677 - -
Lac11g0581 853 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Lac11g0581 853 CDD STKc_OSR1_SPAK 13 274 - -
Lac11g0581 853 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0581 853 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Lac11g0581 853 MobiDBLite consensus disorder prediction 389 539 - -
Lac11g0581 853 MobiDBLite consensus disorder prediction 487 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0581 Lac-Chr11:5908676 Lac8g2588 Lac-Chr8:43528216 3.30E-153 dispersed
Lac11g0581 Lac-Chr11:5908676 Lac7g2113 Lac-Chr7:34628092 6.80E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85730 PF00069 Pkinase 2.60E-58 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0581 K08835 - csv:101211076 1107.05