Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0588 | ATGGCGGATCTCAAAGAGCGGTTGCTTCCTCCGAAACCTGCATCTGCTATAAATCTCAGGGAGGCTATTAATAATCGACCATCAGCCTCTGGAAGGGTACCTTTTCAAGGTGTGGATGTTCTAGGACTGAAGAAGCGAGGCCAGGGGCTTAGATCTTGGATTCGGGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACTATGATGCGTCGTTGTGATCTACCTGCACGTGATTTACGCTTGCTTGATCCTTTATTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTGGTTAATCTAGAGCAGATTCGATGTATTATAACAGCTGACGAAGTTTTGCTGTTAAATTCCCTTGATAGTTATGTATTGCAGTATGTAGTAGAGCTACAAAGGCGGTTGAAAACCACTGGGGTTGATGAGGTTTGGCAGAATGATGGAAATCATGGAGCTGACTTAAATCGAAGAAGGGGAAGTAGGAATTTCGATAATGTATTTGGAAATACCTCTCCTGATTATTTGCCCTTTGAGTTTAGGGCTTTAGAAGTTGCTTTGGAGGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATTGAAGCATATCCATTGCTAGATGAACTTACGTCAAAAATCAGTACACTAAATTTGGAGCGTGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTATCTCACCGAGAAGAAAATAAGAATGGAGTCCTTTGTTTATGGTGATCAGTCTGTGACTGGATACAGATCAATTGATGGAGCATCTATTTCTGCTCCCGTTTCTCCTGTATCTTCACCACCTGATACTCGCAAGCTTGAGAAGAGCCTGAGCATTGCAAGGAGCCGGCATGAGAGCATGAGAAGTTCAGAAAGTGCCACTGAAAATATAGAGGAGCTCGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAACAAGTTGACATCGTTGAAGGAGTACATCGATGACACAGAAGATTTCATTAACATCCAGTTGGATAACGTACGGAATCAGTTGATTCAATTTGAGCTTCTACTCACAACTGCAACATTCGTTGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGAATCCAGACGCATTTAAGTGGGTCCTTGTAATTACCGGAGATGGTTAG | 1284 | 42.45 | MADLKERLLPPKPASAINLREAINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDGNHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKIRMESFVYGDQSVTGYRSIDGASISAPVSPVSSPPDTRKLEKSLSIARSRHESMRSSESATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGNPDAFKWVLVITGDG | 427 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5970602 | 5973816 | + | Lag0031226.1 | Lac11g0588 | 586446 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0588 | 427 | Gene3D | Magnesium transport protein CorA, transmembrane region | 385 | 425 | - | - | |
Lac11g0588 | 427 | Gene3D | Magnesium transport protein CorA, transmembrane region | 125 | 378 | - | - | |
Lac11g0588 | 427 | Coils | Coil | 228 | 255 | - | - | |
Lac11g0588 | 427 | Pfam | Magnesium transporter MRS2-like | 326 | 375 | - | - | |
Lac11g0588 | 427 | Pfam | Magnesium transporter MRS2-like | 57 | 269 | - | - | |
Lac11g0588 | 427 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 384 | 423 | IPR045863 | - | |
Lac11g0588 | 427 | Gene3D | - | 41 | 124 | - | - | |
Lac11g0588 | 427 | CDD | Mrs2_Mfm1p-like | 53 | 425 | IPR039204 | - | |
Lac11g0588 | 427 | FunFam | Magnesium transporter MRS2-1 | 41 | 124 | - | - | |
Lac11g0588 | 427 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 424 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0588 | Lac-Chr11:5970602 | Lac6g0802 | Lac-Chr6:6877473 | 3.30E-101 | dispersed | |
Lac11g0588 | Lac-Chr11:5970602 | Lac11g2650 | Lac-Chr11:42485541 | 4.30E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0588 | K16075 | - | csv:101217419 | 777.319 |