Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0605 ATGCCGATCGATACCTCTGCAGTTTCAGGTCAAATTGTGTGTGTCACTGGCGCTGGAGGCTTCATTGCTTCTTGGCTCGTGAAGCTCCTTCTTGAGAAGGGCTACACTGTTAGAGGAACTGTCAGAAACGCAGATGATCCAAAGAATGCTCATTTGATGGACTTGCAAGGAGCTAAACACCGTTTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGACAGCCTCAAAGCTGCCATTATCGGCTGCGACGGCATTTTCCACACCGCGTCTCCGGTGACCGACGATCCCGAAAAGGTGGAGCAAGCCATAATCGGGACCAAAAACGTCATGACTGCCGCCGCGGAAGCAAAAGTCCGACGGGTGGTGTTCACGTCGTCGATCGGTACCGTCTACATGAACCCTAACCGGAGCCCGGACACAGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAAAACACCAAGAATTGGTATTGCTATGCAAAGACAATAGCAGAACAGACAGCATGGGAATTGGCAGAAGAAAGAGGAGTGGATCTTGTAGTGATCAATCCAATGTTGGTGTTGGGAACTTTGTTGCAAGCAGGAGTGAATGCAAGTGTGGTTCACATAATGAAGTATTTGACAGGATCTGCTAAGACATATGTGAATGCAGTTCAAGGTTATGTGGATGTTAAGGATGTTGCTAAAGCTCATGTTTTAGTTTATGAAACTCCTTCAGCCTCAGGCAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTGCCATGTTCTTCCCTGAATATCCCCTTCCCACCAAGTGTTCTGATGAGGTGAATCCCAGGAAGAAACCTTATAAATACACTGTTGAGAAACTCAAGTCATTGGGAATGGAATTCACACCAATCAAACAATGCATATATGAAACTGTGAAGAGTCTACAAGAAAAGGGTCATCTTCCTCTTCCCTCCCAATTTCAACATTGA 990 45.25 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNADDPKNAHLMDLQGAKHRLSLFSADLLDFDSLKAAIIGCDGIFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLEFCKNTKNWYCYAKTIAEQTAWELAEERGVDLVVINPMLVLGTLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILAMFFPEYPLPTKCSDEVNPRKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQFQH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6177867 6179166 - Lag0031243.1 Lac11g0605 586463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0605 329 Gene3D - 3 329 - -
Lac11g0605 329 CDD FR_SDR_e 13 298 - -
Lac11g0605 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Lac11g0605 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 316 IPR036291 -
Lac11g0605 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Lac11g0605 329 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0605 Lac-Chr11:6177867 Lac4g2745 Lac-Chr4:46323593 5.20E-147 dispersed
Lac11g0604 Lac-Chr11:6167817 Lac11g0605 Lac-Chr11:6177867 1.10E-35 tandem
Lac11g0605 Lac-Chr11:6177867 Lac11g0606 Lac-Chr11:6193196 1.20E-132 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0605 K09753 - csv:116401668 606.29