Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0606 ATGCCCCTCGCCGCCGCCGTGGCTTCCGGCAAAACTGTTTGTGTCACCGGCGCCGGCGGCTTCATTGCCTCTTGGCTGGTGAAGCTCCTCCTCCAAAAGGGTTACACTGTACGAGGCACTGTTAGAAACCCAGATGATCAGAAGAATGCTCATTTGAAAGAGCTGGATGGAGCTAAGGAAAGGCTTACGTTGTACGGTGCTGATCTTCTTGATTTTGAGAGCCTCAAAGCTGCCATTATCGGTTGTGACGGCGTTTTCCACACGGCGTCTCCGGTGACGGATGATCCAGAAAAGGTGGAGCAAGCAATAATCGGGACGAAGAACGTCATAACGGCAGCGGCGGAGGCCAAGGTCCGACGGGTGGTTTTCACATCATCGATCGGAACTGTATACATGAACCCTAATCGGAGCCCTGACATGGTAGTAGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAGCACAAAGAACTGGTATTGCTATGCAAAAACAATGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGGGGTGGATCTAGTGGTGGTGAATCCAATGTTGGTGCTTGGACCTTTATTACAAGACACAATAAATGCAAGTGTTGATCATATAATGAAGTACTTGACTGGATCTGTGAAGACATATGTGAATGCTGTTCAAGGTTATGTTCATGTTAAGGATGTTGCTAAAGCTCACTTGTTACTGTTCGAAACTCCCTCTGCTTTTGGTAGATACATTTGTGCTGAAACTATGCTTCATCGTGGAGATTTGGTTCAGATTTTGGCTAAGTTCTTCCCTGAGTATCCCATTCCTACCAACTCCGATGGCCGCCGACAGCCGGCGAACGGCGACGCCGCCCGGGTTTTTTCGAGGAGGGAGGAGACCCACAAACAAGGAGAAATCGGGAGTTTGGTCGCCCACAAGGAGAAATTGAGAGTTTGGTCGCCAGCAAGGAGAAATCAGGAGGGAGTTTGGTCGCCGAGATGGTTGCTGAACGAGACTCGAAATCGTAGGGGGGTGCTGGAACAACGTGCGAAGATCTCCGTTCGTTGGGTTCGACTCGCGTTCGATTGGAGGCGGCGTTCGTGGGTATGCAGGCGGCAGCGAGTTCAGAAAAAGACCATCTCGACGATTTCTCTTTGCCGGCGAGTTTCGAAAGACCGTTTAGCAGGCTCCCTCCCGATTTCTCCTTGCCAGGACCAAACTCCATCTCGACGAGCTCGAAAACACCCACACTGCAACAATCTTGACGGCGTTCGTGGGTATGCAGGCGACGACGCAAGGCAGTGTTCGTGGGTCTCCTCCCTCCTCGTTTAA 1323 51.02 MPLAAAVASGKTVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDQKNAHLKELDGAKERLTLYGADLLDFESLKAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVITAAAEAKVRRVVFTSSIGTVYMNPNRSPDMVVDESCWSDLDFCKSTKNWYCYAKTMAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQDTINASVDHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLLFETPSAFGRYICAETMLHRGDLVQILAKFFPEYPIPTNSDGRRQPANGDAARVFSRREETHKQGEIGSLVAHKEKLRVWSPARRNQEGVWSPRWLLNETRNRRGVLEQRAKISVRWVRLAFDWRRRSWVCRRQRVQKKTISTISLCRRVSKDRLAGSLPISPCQDQTPSRRARKHPHCNNLDGVRGYAGDDARQCSWVSSLLV 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6193196 6198536 - Lag0031244.1 Lac11g0606 586464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0606 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 280 IPR036291 -
Lac11g0606 440 CDD FR_SDR_e 13 274 - -
Lac11g0606 440 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 305 IPR050425 GO:0016616(PANTHER)
Lac11g0606 440 Gene3D - 4 313 - -
Lac11g0606 440 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Lac11g0606 440 FunFam Cinnamoyl-CoA reductase 1 6 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0604 Lac-Chr11:6167817 Lac11g0606 Lac-Chr11:6193196 4.20E-35 dispersed
Lac11g0606 Lac-Chr11:6193196 Lac4g2745 Lac-Chr4:46323593 7.70E-122 dispersed
Lac11g0605 Lac-Chr11:6177867 Lac11g0606 Lac-Chr11:6193196 1.20E-132 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0606 K09753 - csv:101219069 509.22