Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0678 ATGGCGCATATTTTGCTTCATGGCACCCTTCATGTCACCATTTATGAGGTGGATAAGCTTCATACCGGTGCTCGCAATTTCTTAAAATCGTTGGTTGAAAACGTAGAGGAAGCAGTAGGATTTGGCAGAGGAGTAACGAGGCTATATGCAACCATTGATTTAGAAAAGGCCAGAGTTGGAAGAACAAGAAGACTTGAGAAAGAACATTCAAACCCAAAATGGTACGAAACTTTCCACATCTACTGTGCTCACATGGCTTCCAACATCATCTTCACTGTCAAAGACGACAACCCCATTGGAGCAACCTTAATCGGCAGAGCATATTTGTCTGTTCGAGAGATCATCCACGGTGAAGAAGTTGACCAATGGGTTCCTATCTTAGACGAACGCAAGAATCCCATTCGTGGGGAGCCCAAAATCCATGTCAAATTACAATATTTCGATGTCACAAAGGATCAAAACTGGGGTCGTGGCATCAAAAGCCCCAAGTTTCCTGGAGTTCCCTACACTTATTTCTCTCAGAGACGAGGCTGTAAGGTAACTCTGTACCAAGATGCTCATGTTCCTGACAACTTTGTTCCCAAAATCCCTCTTGCTGGGGGCAAGTTTTATGAGCCACATAGATGTTGGGAAGATGTTTTTGATGCAATTACTAATGCCAAACACTTGATTTACATTACTGGTTGGTCTGTTTACACTGAGATTTCTTTGGTGAGGGATAGAAGAAGGCCAAAGCCTGGTGGAGACATAATGCTCGGTGAATTGCTTAAGAGAAAGGCGAGTGAGGGAGTTAGAGTTCTTTTGCTTGTTTGGAATGATACAACTTCTGTGCCGATATTGAAGGAAGAAGGGCTGATGGCAACTCATGATGAAGACACTGCTAAGTACTTTGCTAATACTGATGTGCATTGTGTGTTGTGTCCTCGCAATCCTGATGATGGGGCTAATGTTATTCAGGACATTGCTGTTGGGACAATGTTCACTCATCACCAGAAGATTGTTGTAGTGGACAGTGCTTTGCCTAGTGGGGATCCAAACAGGAGGAGAATTGTGAGTTTTGTTGGTGGGATTGACCTTTGTGATGGTAGGTATGATACTCCATTTCATTCCCTTTTCAGGACTTTGGATTCTGCTCATCATGATGATTTCCATCAGCCAAACTTTGCTGGTACTTCCATAAACAAAGGCGGTCCGAGAGAGCCGTGGCACGATATCCATTCCCGGCTCGAAGGACCGGTTGCGTGGGATGTTTTGTACAACTTTGAGCAGAGATGGAAGAAGCAAGGTGGGAAAGATTTGCTTTTGAAACTGAGGGATCTAGATGACATCTTTATCACTCCATCACCTGTGACGTTCCCAGATGACTTTGATAGTTGGAATGTTCAAGTTTTCAGGTCGATCGATGGCGGGGCGGCTTTCGGCTTCCCCGACTCACCGGAAGAAGCAGCCAAAGCAGGGCTCATAAGTGGAAAGGACAACACTATTGATCGAAGTATTCAAGATGCTTACATCAATGCCATTCGACGAGCAAAGAATTTCATTTACATTGAAAACCAGTATTTCCTTGGAAGCTCGTTCGAATGGAGAGGTGATGATGTGAAGCCTGAGATGATCAATGCCCTGCACCTGATCCCAAAGGAACTTTCACTTAAGATTGTGAGTAAGATTGAAGCTCGAGAGCGGTTCACCGTGTACATTGTCGTCCCGATGTGGCCGGAAGGATTTCCAGAAGGGGGAACAGTTCAAGCAATATTAGATTGGCAAAGAAGAACAATGGAAATGATGTATAAAGATATAGTTTTAGCTCTTAGAGCTAATGGAATAGAAGAGGATCCTAGAAACTATCTGACATTCTTTTGTGTAGGTAATCGCGAAGTTAAAAAGCCTGGAGAATATGAGCCATCAGAATCACCTGAAGAAAATTCTGATTACCTTAGAGCCCAGCAAGCCAGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATTGTTGACGACGAATACATAATCGTGGGATCAGCCAACATCAACCAAAGATCAATGGATGGTGCAAGGGACTCAGAGATAGCCATGGGAGCTTACCAGCCATATCATTTGTCAACTCGAGAGCCAGCAAGAGGCCAAGTCCATGGCTTCCGTTTGGCATTATGGTATGAACATTTAGGATTGCTTCATGAATCCTTCCTCATGCCAGAAAGTATTGAGTGTGTTAAAAGAGTAAACCAACTTGCTGAAAAGTATTGGGATCTATACTCAAGTGAGAGCTTTGAACATGACCTTCCCGGCCACTTGCTTCGCTACCCCATCGGCATCACCGGTGACGGTGAAGTTACCGAGCTTCCGGGGTTCGAGTACTTCCCCGATACTAAGGCTCGAGTTCTAGGTAACAAATCTAACTATCTCCCTCCAATCCTCACTACTTGA 2424 44.27 MAHILLHGTLHVTIYEVDKLHTGARNFLKSLVENVEEAVGFGRGVTRLYATIDLEKARVGRTRRLEKEHSNPKWYETFHIYCAHMASNIIFTVKDDNPIGATLIGRAYLSVREIIHGEEVDQWVPILDERKNPIRGEPKIHVKLQYFDVTKDQNWGRGIKSPKFPGVPYTYFSQRRGCKVTLYQDAHVPDNFVPKIPLAGGKFYEPHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDRRRPKPGGDIMLGELLKRKASEGVRVLLLVWNDTTSVPILKEEGLMATHDEDTAKYFANTDVHCVLCPRNPDDGANVIQDIAVGTMFTHHQKIVVVDSALPSGDPNRRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFAGTSINKGGPREPWHDIHSRLEGPVAWDVLYNFEQRWKKQGGKDLLLKLRDLDDIFITPSPVTFPDDFDSWNVQVFRSIDGGAAFGFPDSPEEAAKAGLISGKDNTIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFEWRGDDVKPEMINALHLIPKELSLKIVSKIEARERFTVYIVVPMWPEGFPEGGTVQAILDWQRRTMEMMYKDIVLALRANGIEEDPRNYLTFFCVGNREVKKPGEYEPSESPEENSDYLRAQQARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSTREPARGQVHGFRLALWYEHLGLLHESFLMPESIECVKRVNQLAEKYWDLYSSESFEHDLPGHLLRYPIGITGDGEVTELPGFEYFPDTKARVLGNKSNYLPPILTT 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7033408 7036594 - Lag0031316.1 Lac11g0678 586536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0678 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824(InterPro)
Lac11g0678 807 SUPERFAMILY Phospholipase D/nuclease 497 737 - -
Lac11g0678 807 PANTHER PHOSPHOLIPASE D 5 794 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Lac11g0678 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Lac11g0678 807 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Lac11g0678 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Lac11g0678 807 SMART C2_3c 9 123 IPR000008 -
Lac11g0678 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Lac11g0678 807 Gene3D Endonuclease Chain A 475 697 - -
Lac11g0678 807 Gene3D C2 domain 6 156 IPR035892 -
Lac11g0678 807 Pfam Phospholipase D Active site motif 655 680 IPR001736 GO:0003824(InterPro)
Lac11g0678 807 Pfam Phospholipase D Active site motif 326 363 IPR001736 GO:0003824(InterPro)
Lac11g0678 807 SUPERFAMILY Phospholipase D/nuclease 150 435 - -
Lac11g0678 807 FunFam Phospholipase D delta 200 443 - -
Lac11g0678 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824(InterPro)
Lac11g0678 807 Pfam C2 domain 9 125 IPR000008 -
Lac11g0678 807 Gene3D Endonuclease Chain A 200 439 - -
Lac11g0678 807 SMART pld_4 325 363 IPR001736 GO:0003824(InterPro)
Lac11g0678 807 SMART pld_4 653 680 IPR001736 GO:0003824(InterPro)
Lac11g0678 807 CDD C2_plant_PLD 2 147 - -
Lac11g0678 807 FunFam Phospholipase D 466 699 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0678 Lac-Chr11:7033408 Lac5g0583 Lac-Chr5:6529221 3.60E-194 dispersed
Lac12g1850 Lac-Chr12:34910714 Lac11g0678 Lac-Chr11:7033408 7.90E-200 transposed
Lac12g2427 Lac-Chr12:41355974 Lac11g0678 Lac-Chr11:7033408 2.20E-172 transposed
Lac1g3046 Lac-Chr1:51104677 Lac11g0678 Lac-Chr11:7033408 4.10E-196 transposed
Lac11g0678 Lac-Chr11:7033408 Lac4g2792 Lac-Chr4:46650671 0.00E+00 wgd
Lac11g0678 Lac-Chr11:7033408 Lac6g0638 Lac-Chr6:5414661 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0678 K01115 - csv:101215246 1565.82