Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0702 ATGGAGAATCTCAGGGCTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAGCAGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGAATTGGAATTTTGGCCCCAACTGCATACATTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTCGGTGAGCAACTGAGCCGAGATACAGATGGAAGCTTGAGCACGGTAGAAACTTTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGGGTTGCAGAACCTACAATTATTATGTATACCTATCTGTACAATTTTTCCAAAGAAAGGAAAGATATAGGGAAAGAGCTCTTCTTAGGTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTCTTCCTTCTTGCTATATTCAATGCTTCCAGGCTAATCAACAGATTTACAAGGATTGCTGGGGAACTTTTTGGCATGTTAATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGTAGTTCCCAAGGCTGAGGATCCAAGTTTAGAGAAGTATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATTGTATTTACTTTTGGCCTTCTCTATACTGCTTTGAAAAGCAGAAAGGCAAGGTCATGGTTGTATGGCACAGGCTGGCTAAGGAGTTTTATTGCAGACTATGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCCTTTGGAGTTCCTAGAAGACTTCAAAGTCCTCTCGCATGGCAATCTACTTCTCTGCTCCATTGGACCGTCATCAAGGACATGGGGAAGATACCTCCTGCATACATCTTTGCGGCCATTATTCCCGCTGTGATGATTGCAGGACTTTATTTTTTTGATCATAGTGTTGCTTCTCAAATGGCACAGCAAAAGGAGTTTAATCTCAAGAACCCTTCTGCCTATCACTATGACATCCTGTTGCTGGGATTTATGACATTGCTTTGCGGGTTGATCGGGCTTCCTCCTTCAAATGGGGTTTTACCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAAGCATAAAAAGGAAAGCTAGTGATTCTGAAATCTATGGCCACATGCAAGCTGTGTTCTTAGAAATGGAGAGTAGCCCAATTACAACATCAGTAGTCAAAGAGCTGGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAGTAAGGATGAAAATTCAAAGGATACATTTGACCCGGAGAGGCATATTGATGCTTATCTTCCTGTCCGAGTGAACGAGCAACGATTGAGCAATCTGCTGCAATCACTTCTGGTGGCAGCATCAGTTTTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTTTGGGGATACTTTGCCTACATGGCCATTGACAGTCTACCTGGAAACCAATTCTGGGAAAGACTTTTACTGCTCTTCGTAATGCCTAGTCGACGTTACAAGGTTCTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTACATCGCATCCTTCCCAAGCTACTCCAACCTCATTATTTGCAGGAGCTCGATGCAGCTGAGTACGAAGAACTAACCGGTACCCCGGTTCTCTCGCTTGGCCTTTCTATCAAGGAAAAGGATACCACTCATCAAATAGTTAATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATGCGTTGACAACCCATAGAGGGGAGTTGAAGGTCAGAACCAGAAGCTTCAACGACGATCGGCACGGTCAGGTCTATCCTGACCAAGGCAATGGCAAATACTAA 1926 43.61 MENLRAPFRGIVDDIRGRAACYKQDWVDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFSKERKDIGKELFLGWAGWVCVWTALLLFLLAIFNASRLINRFTRIAGELFGMLISVLFIQEAIKGVVSEFVVPKAEDPSLEKYQFHWLYTNGLLGIVFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVLVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLLHWTVIKDMGKIPPAYIFAAIIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKESIKRKASDSEIYGHMQAVFLEMESSPITTSVVKELEDLKEAVMKGESKDENSKDTFDPERHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQLHRILPKLLQPHYLQELDAAEYEELTGTPVLSLGLSIKEKDTTHQIVNNEDEVEICDAEILDALTTHRGELKVRTRSFNDDRHGQVYPDQGNGKY 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7207509 7212043 - Lag0031340.1 Lac11g0702 586560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0702 641 PANTHER ANION EXCHANGE PROTEIN 4 547 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Lac11g0702 641 Pfam HCO3- transporter integral membrane domain 7 181 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac11g0702 641 Pfam HCO3- transporter integral membrane domain 201 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac11g0702 641 Pfam HCO3- transporter integral membrane domain 454 549 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Lac11g0702 641 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0438 Lac-Chr11:4476716 Lac11g0702 Lac-Chr11:7207509 6.90E-205 dispersed
Lac2g1231 Lac-Chr2:10018798 Lac11g0702 Lac-Chr11:7207509 2.30E-10 transposed
Lac11g0702 Lac-Chr11:7207509 Lac6g0673 Lac-Chr6:5713728 2.20E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0702 K24194 - csv:101210964 1118.99