Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0737 ATGGATTTCTGGCCGGAATTTCTCGCCAGCAGCTGGGGAAAAGAGTTCGTCGCCGGCGGAATCGGCGGCGTCGCCGGCGTCGTCTCCGGCTACCCACTCGACACCCTCCGCATTCGACAACAACACTCCACCTCCGGCTCCGCCATCAGCGTCCTCCGCAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACAGAGGAATGGGCGCTCCACTCGCTTCCGTCACTTTTCAGAACGCCATCGTTTTCCAGACGAACGCCGTGCTGTGCAGGGCATTTGATCCGGCGGCGAGTGAGACCCGTCCGCCGTCGTACAAGGCGGTGGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTGATTCTAACGCCGGTGGAGCTGGTGAAGATCCGTCTTCAATTACAGGACTTGGGAAATTCAAGCCACTCAGATCTGAGCTCGTCTCGGCCCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAGAGGGCTATACAGAGGCTTAACAATCACGATGCTCAGAGACGCTCCTTCTCACTGTTTTTACTTTGGGACTTACGAATTCATGAGAGAGAAGCTTCATCCCGGCTGCAGAAACTCCGGCCAAGAGACGTTGAGAACGATGCTCGTCGCCGGCGGCCTGGCCGGCGTCGCCAGCTGGGTTTGCTGCTACCCACTCGACGTGGTGAAAACCAGACTTCAAGCTCAGTCCAAATTCTCCTTTCAAAAGTACAGTGGAATCATGGATTGTTTCTACAAGAGCGTCAAGGAAGAAGGCTACAGTGTTCTTTGGCGCGGATTGGGAACCGCCATTGCCAGAGCTTTCGTGGTCAATGGCGCCATTTTCTCTGCTTATGAACTCAGCTTGAGATGTCTGTTCAGCAATGGCGGATTTCATGCTGAAAACACGATTTGA 930 55.48 MDFWPEFLASSWGKEFVAGGIGGVAGVVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAASETRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGNSSHSDLSSSRPGPMQVAKNIFKTEGYRGLYRGLTITMLRDAPSHCFYFGTYEFMREKLHPGCRNSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFSFQKYSGIMDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLFSNGGFHAENTI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7733082 7734126 + Lag0031375.1 Lac11g0737 586595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0737 309 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085(InterPro)
Lac11g0737 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Lac11g0737 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
Lac11g0737 309 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085(InterPro)
Lac11g0737 309 Gene3D Mitochondrial carrier domain 9 301 IPR023395 -
Lac11g0737 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Lac11g0737 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 297 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Lac11g0737 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Lac11g0737 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Lac11g0737 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Lac11g0737 309 Pfam Mitochondrial carrier protein 211 298 IPR018108 -
Lac11g0737 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Lac11g0737 309 Pfam Mitochondrial carrier protein 11 87 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0737 Lac-Chr11:7733082 Lac11g2408 Lac-Chr11:40340593 7.00E-45 dispersed
Lac10g3242 Lac-Chr10:46490785 Lac11g0737 Lac-Chr11:7733082 3.30E-26 transposed
Lac2g2589 Lac-Chr2:39443175 Lac11g0737 Lac-Chr11:7733082 2.40E-14 transposed
Lac8g1658 Lac-Chr8:34658460 Lac11g0737 Lac-Chr11:7733082 1.70E-06 transposed
Lac11g0737 Lac-Chr11:7733082 Lac4g2872 Lac-Chr4:47263774 3.60E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0737 K15109 - csv:101222749 578.941