Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0775 ATGTTCTGGTCAATGAATCCTGTACGAATTCGCACTTTGTTCTTCCTTCTATACTTTGCCGTTCTTCTTCAAGATCATTCCCTCTGTTCCTCTTATCCCACGCCCTTAAATTGTACGGATACAACCCGTTTATGCACCTCGTTTCTGGCCTTCAAACCTCAGCCAAATCAGACCCTTTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTCACTGTGGAAGGCAATGGCCGGGACTATGTGTTCATCAGGAAGAACTGTTCCTGTGCCTCTGGATTGAAGAAATACATCACCAACACTACTTTCACCATCAAATCGAATCGTGGTTATGTGTATGACATAGTCATGGAAGCGTACGATGGGCTTGCGCTGTTGCCCAACACGACCCGAATGGCGAGGAATGGCGCTGTTGTGTCTTTGAGGCTGTTTTGTGCCTGTTCAAGCGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGGGATACCATTGAGTCTTTAGCTAGCCGATTTGGGGTCAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCCAGCAATGTCACTGTGGGTGCTTTGTATTATATTCCCTTGAATTCGGTTCCTGGCGATCCTTATCCACTGGAGACAGACGTTTCTTCTACTCCTACTCCTGCTCCTTCCTATTCTCTGAACAATTTCTCAGATAATGCTGAGAGCCCCAAGCGTCATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTATTAGGCATAGTAGGTTATGCTTGCTGTAGGTGGTTGAAATGCTTTTCTAGATCAAGGAGTAGCCACTCCAAAGATCCTGGTGGCAAGGTTTCCCACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGTTGTGCTTCAGGAAGGTATATTTGCTGCAGTTCTGCAGATTGGAAACAAGCCAGTGCGGAATCTAGCGATAACCAGAGTGCAATTCCAAAAGCCATCGAGAGCAATGTATTCGATGTAGACAAACCTGTGGTTTTCTCATGCGAAGAAATTTTTTCCTCAACTGATGGTTTCTCTGATTCGAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTATTATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCAACAAAAACTAAAGAGTTTATGGCAGAGATGAAAGTCCTCTGCAAGGTTCATCATGCAAACCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTCTTTCTTATTTATGAATATGCCCAAAAAGGTCCCCTCAAAAGTCATTTACATGATCCTCTTAACAAGGGTCATACATCACTATCTTGGATTATGAGACTTCAAATTGCTTTGGACGCTGCGAGAGGTCTCGAATACATTCACGAGCATACTAAAACTCATTATGTCCATAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTAGGGCAAAGATATCTGACTTTGGGTTGGCCAAACTTGTTGGAAAAACAAATGAGGGTGAAGCCACAGTAACCAAAGTTGTCGGTACATACGGTTATTTGGCTCCTGAATATTTGAGTAACGGTCTTGCTACAACCAAAAGTGATGTATATGCTTTCGGTGTCGTTCTCTTTGAGCTTATATCTGGAAAGGAGGCGATTATACGAATTGAGGGCACAACTGTGAAAAATCCTGAAAGACGTTCTTTAGCATCCATTATGTTAGCTGTTCTTCGGAATGCGCCCGATCCTATGAATATGGCAAGTCTGAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCCATGTTAGCAAAGCAGTGTGTGGATGAGGATCCCATCTTACGACCCGACATGAAGCAAGTCGTAATATCCTTGTCACAGATCCTACTCTCTTCGGTCGAGTGGGAAGCGACGTTAGCTGGTAACAGCCAAGTTTTTAGTGGTCTTGTCCAAGGAAGATAG 2013 43.22 MFWSMNPVRIRTLFFLLYFAVLLQDHSLCSSYPTPLNCTDTTRLCTSFLAFKPQPNQTLSVIQSMFDVLPEDVTVEGNGRDYVFIRKNCSCASGLKKYITNTTFTIKSNRGYVYDIVMEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIENPSNVTVGALYYIPLNSVPGDPYPLETDVSSTPTPAPSYSLNNFSDNAESPKRHPPYIWIVGSLGIILVLILLGIVGYACCRWLKCFSRSRSSHSKDPGGKVSHKFHILGKSSFCCASGRYICCSSADWKQASAESSDNQSAIPKAIESNVFDVDKPVVFSCEEIFSSTDGFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKSHLHDPLNKGHTSLSWIMRLQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFELISGKEAIIRIEGTTVKNPERRSLASIMLAVLRNAPDPMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8160377 8164906 - Lag0031413.1 Lac11g0775 586633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0775 670 FunFam PTI1-like tyrosine-protein kinase 3 432 656 - -
Lac11g0775 670 SMART serkin_6 360 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0775 670 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 28 659 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Lac11g0775 670 SMART LysM_2 158 202 IPR018392 -
Lac11g0775 670 ProSiteProfiles Protein kinase domain profile. 360 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0775 670 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524(InterPro)
Lac11g0775 670 Pfam Protein tyrosine and serine/threonine kinase 365 640 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0775 670 Pfam LysM domain 161 196 IPR018392 -
Lac11g0775 670 Gene3D Phosphorylase Kinase; domain 1 332 431 - -
Lac11g0775 670 SUPERFAMILY LysM domain 157 202 IPR036779 -
Lac11g0775 670 Gene3D Transferase(Phosphotransferase) domain 1 433 657 - -
Lac11g0775 670 FunFam Kinase family protein 335 431 - -
Lac11g0775 670 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Lac11g0775 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0775 670 Gene3D LysM domain 154 207 IPR036779 -
Lac11g0775 670 SUPERFAMILY Protein kinase-like (PK-like) 342 642 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0775 Lac-Chr11:8160377 Lac13g0168 Lac-Chr13:1184429 2.50E-95 dispersed
Lac7g0674 Lac-Chr7:5416788 Lac11g0775 Lac-Chr11:8160377 2.50E-57 dispersed
Lac9g2604 Lac-Chr9:44561748 Lac11g0775 Lac-Chr11:8160377 1.50E-37 dispersed
Lac11g0775 Lac-Chr11:8160377 Lac12g0558 Lac-Chr12:5951816 1.50E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85735 PF07714 PK_Tyr_Ser-Thr 3.30E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0775 - - - 0.0