Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0805 ATGGCCGCTGTCCTCAGCTTCCTCCTTTATCTTCTCTCACTTTCTCCTCTTCTAGCTTTCGTTTCCACCCAGAATCCTTCAGGCTTCATCAGTTTAGATTGTGGACTCCCGACGGATGTCAAGTATGAAGAACCGAATAGCGGGATAATCTATGAGTCTGATGCAACATTCATAGAAACTGGCACAATTCACAACATTTCTTCCGATAGCATCACAAACCACAACCAACAGTTATGGAGTCTGAGAAGCTTTCCTGAAGGGACCAGAAATTGCTACAAAGTTAGAGTAAAAGCCGACACCAAGTATTTGATTCGAGCTAGCTTTCTATACGGCGACTATGACGGTCGAAAAAAACTCCCTAGCTTCAATCTCCATTTTGGACCCAACTTTTGGACTTCCGTCAATCTCCCTGCAATCGACATGGTGAAGCATCTGGAGATTATACATGTTGTTTCTTCAAATTATGCACAAGTTTGCCTCATTGACACTGGTGCCGGAACTCCATTCATTTCGGCTCTAGAGCTAAGGCCTTTAAACAACTTGTCTTACCCAACAGGGTCACCGCCGATGTCACTAGCCAATTTCTTCCGCTTCGATGTGGGTTCTGTTTACAACCAAACTTACAGATACAAAGATGACATTTACGATCGCATTTGGGTACCCATGGCTCCACTCCCAGAATGGACTTCCATAACCACACCCAACCCAATAAATGTCAATGACCCATTGTTCTTCAATCCAGCTCCCGCGGTCATGAATTCTGCAGCGACTCCAAAAGACGCCACTGCGCCATTACAATTCCACTGGATTTCACCAACCAACGCCACACAGTTTTTCGTGTACATGTACTTCACAGAGTTTCTAAAGCTTCAATCCAATCAGTCCAGAGTGTTTGACATCATGCTCAATGGGAAAAAATGGTATACTAAATCGGTTTCTCCAAATTACTTGGACGAATTTGTTGTTTACAGTACTATACCATGGACGGGTGGAATGTTCAATTTCTCCATCATCAAAGCCTCCAATTCCACTCTTCCTCCGGTCCTCAACGCCATTGAAGCTTATACGGTCATCAATCTCCCTTTATCGGAGACAAACCAACAAGATGTTGAGGGCGTTTCAAATATCAAGAAAGCGTATGGAGTTGAAAGAAATTGGCAAGGAGATCCATGTTCCCCTACAGAATTTATTTGGCAAGGACTCGAATGTAGGTTTGTTGACGATTCTGAGCCTCCCAGAATTACATCCTTGAATTTGTCCTCGAGTGGACTCACAGGGAAAATAGATAAAGACATAGCATATCTTACAATGCTAGAAACTCTGGATTTATCAAACAATAATTTAAGTGGAACGGTACCTGAGTTTCTTGGTCAATTGCCATCATTGACGGTCTTAAATTTAGAAAGAAACCAACTTTCAGGACTTATTCCTACCCAACTCATTGAAAAGTTGAATGATGGTACTTTAAACTTAAGCTTCGGTGAAAATCCAAACTTGTTCATCACAACTCCAAGTGAAAAAAGAAAAGACAACATAGTTGTTCCTGTACTAGCATCCGTTTGTGGATTTGTTCTGCTTTTGGTCTTGATTTTCGGTGTTATCTTTTGGATCAAGATTAAACAAAGAAAACAACAAGGTGTTGAGATTGCAAGAACAAAACAAAATGTCGAGCAATCTCAACAATGGGGTGCGACCAAAAAATGCTATTCTTACTCTGATATCTTGAGAATGACAAACAATTTGGAGCGACCTCTCGGAGAAGGTGGATTTGGAAGAGTTTACTATGGTCAAATCAACGACACTGAAGTAGCTGTCAAGATGCTTTCTCCTCAATCAGCTCAAGGGTATCAACAATTTCAAACAGAGGTTGACCTTCTCATGAGGGTTCATCACAAAAACTTGACTGAACTTGTTGGATATTGTAATGAATCAGCCAATAAAGGACTAATCTATGAATACATGGGAAGAGGGAACTTAGAATCTCTTATCTCAGGTGCACAATCAGGGAAGGTTTTGAATTGGAAAGATAGGCTTCTTATAGCAATGGATGCAGCACATGGATTGGAGTACCTTCATCACGGTATCAAACCGGCTATAATACATAGAGATGTGAAGTCTACAAACATCTTATTGGACACAAATTTTCGAGCAAAAGTGTCTGATTTTGGGTTATCTAGAATTTTTCCTATAGAAGGTGGCACCACTCATGTGACAGCCACCAATGTAGTCGGTACTCACGGCTACATTGACCCAGAGTACCACTTGTCGTTTAGATTAAATGAGAAAAGTGACGTTTATGGATTCGGAGTTATCCTTCTTGAAATCATAACTGGAAAACCAGCTTTGATAAAAACTAAAGACCAAGTAACTCATGTCTATCAATGGGTCAAGCCATTGCTTTCTCAAGGCGATATTCAATCTATCATCGACCCACAAATAGAAGAAGATTTGGATGTGAACTCTATCTGGAAAGCAGTTGACTTAGCAATGTGTTGTGCATCTTCAAAATCAATAGATAGACCCAATATGAGTGAAGTTTTGATCGAGTTGAAAGAATGTTTGACCATGGAATTGGCTCGTCATAATCATAGTCAATCTGAATATGTTGTTGCAGATTCCAGCATTATATTTGGACCATCGGCAAGGTACCGCATAAGTTCAAGGTATCCACCTTTAAGCAGGTTAGTGAAGAAGTGGTTTGAAAAATTGCCAAGGAGATTCATTAGTTCTTTCAGAGAATTGGCGCGTGCGTTCATCACCCAACTCCTAGGAGCCAGAGACCAACTCAAGCTTTACATCAATCTCCTAACTTTCAAACAACAGTCAGCGTCTTCTTCGATTTCTATCACTCTTCGGTCCGATTTCTATCACTCGCCTTCGTTTCTCGCCTTCGTCTTCTCCGACATTCATCTTCTCCCATCCTCTTCTCCACATTCTATCAGCGTCTTCTCCACATTCTATCAGCTCTTCTCCGATTTCTATCAGTCTTCAGTTGAAAATATTGATGATGGGGATGAGTTGGACTCAGAAATTAAACAATCCTTCTTCAAACATAAAGACACAATTGATAGGAAGGATTTAGGAGCCATATATCTCCAAGGATTTCCAATAGTCCTAATATATTGGGCATTGGAAATCATTCCGAAATTATCTGAGGAAACCTTAGGATTTGCTAGGAAAATCCAAAGCCCCACCTCTACCCCAAGGATGACTCATTGGGAGATATTGGACACGCCAGGTTGGAGCCAATTCGATGAAAAGGTCTTCTCCGCTGAAGATTTCTCTGTTGTTCCATTAGTGCCAACTGATGAAGAAATGGCATCAAAAAATATGGAACACTTCATCAAAGAAATGGAGAAGGAGAAGGAGGAAAGGATGGAAAGAGAAAAGAATGAAATGGAAAAGAAAAGACACGAGGAAGAAGAAGAAAAAAGAAAAAGAGAAGAAAATGAAGAAAAAGAAAAAAGAAAAAGAGAGAAAAGGAAGAAGAAGAAAAAAGAGAACAAGGAAAGAATGAAAAAGAAAAAGAAAGGATATCATTGTTGGAACATGATATCAAAAATTTGA 3567 40.23 MAAVLSFLLYLLSLSPLLAFVSTQNPSGFISLDCGLPTDVKYEEPNSGIIYESDATFIETGTIHNISSDSITNHNQQLWSLRSFPEGTRNCYKVRVKADTKYLIRASFLYGDYDGRKKLPSFNLHFGPNFWTSVNLPAIDMVKHLEIIHVVSSNYAQVCLIDTGAGTPFISALELRPLNNLSYPTGSPPMSLANFFRFDVGSVYNQTYRYKDDIYDRIWVPMAPLPEWTSITTPNPINVNDPLFFNPAPAVMNSAATPKDATAPLQFHWISPTNATQFFVYMYFTEFLKLQSNQSRVFDIMLNGKKWYTKSVSPNYLDEFVVYSTIPWTGGMFNFSIIKASNSTLPPVLNAIEAYTVINLPLSETNQQDVEGVSNIKKAYGVERNWQGDPCSPTEFIWQGLECRFVDDSEPPRITSLNLSSSGLTGKIDKDIAYLTMLETLDLSNNNLSGTVPEFLGQLPSLTVLNLERNQLSGLIPTQLIEKLNDGTLNLSFGENPNLFITTPSEKRKDNIVVPVLASVCGFVLLLVLIFGVIFWIKIKQRKQQGVEIARTKQNVEQSQQWGATKKCYSYSDILRMTNNLERPLGEGGFGRVYYGQINDTEVAVKMLSPQSAQGYQQFQTEVDLLMRVHHKNLTELVGYCNESANKGLIYEYMGRGNLESLISGAQSGKVLNWKDRLLIAMDAAHGLEYLHHGIKPAIIHRDVKSTNILLDTNFRAKVSDFGLSRIFPIEGGTTHVTATNVVGTHGYIDPEYHLSFRLNEKSDVYGFGVILLEIITGKPALIKTKDQVTHVYQWVKPLLSQGDIQSIIDPQIEEDLDVNSIWKAVDLAMCCASSKSIDRPNMSEVLIELKECLTMELARHNHSQSEYVVADSSIIFGPSARYRISSRYPPLSRLVKKWFEKLPRRFISSFRELARAFITQLLGARDQLKLYINLLTFKQQSASSSISITLRSDFYHSPSFLAFVFSDIHLLPSSSPHSISVFSTFYQLFSDFYQSSVENIDDGDELDSEIKQSFFKHKDTIDRKDLGAIYLQGFPIVLIYWALEIIPKLSEETLGFARKIQSPTSTPRMTHWEILDTPGWSQFDEKVFSAEDFSVVPLVPTDEEMASKNMEHFIKEMEKEKEERMEREKNEMEKKRHEEEEEKRKREENEEKEKRKREKRKKKKKENKERMKKKKKGYHCWNMISKI 1188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8528748 8541895 + Lag0031443.1 Lac11g0805 586663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0805 1188 PRINTS Leucine-rich repeat signature 459 472 - -
Lac11g0805 1188 PRINTS Leucine-rich repeat signature 438 451 - -
Lac11g0805 1188 Pfam Leucine rich repeat 412 472 IPR001611 GO:0005515(InterPro)
Lac11g0805 1188 Pfam Protein tyrosine and serine/threonine kinase 581 793 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0805 1188 SUPERFAMILY Protein kinase-like (PK-like) 558 850 IPR011009 -
Lac11g0805 1188 PANTHER OS07G0107800 PROTEIN-RELATED 23 858 - -
Lac11g0805 1188 SUPERFAMILY L domain-like 398 482 - -
Lac11g0805 1188 FunFam Leucine-rich repeat receptor-like protein kinase 552 653 - -
Lac11g0805 1188 CDD STKc_IRAK 585 852 - -
Lac11g0805 1188 Gene3D Transferase(Phosphotransferase) domain 1 655 875 - -
Lac11g0805 1188 MobiDBLite consensus disorder prediction 1119 1156 - -
Lac11g0805 1188 Pfam Malectin-like domain 32 357 IPR024788 -
Lac11g0805 1188 MobiDBLite consensus disorder prediction 1157 1182 - -
Lac11g0805 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0805 1188 SMART serkin_6 579 919 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0805 1188 MobiDBLite consensus disorder prediction 1119 1188 - -
Lac11g0805 1188 ProSiteProfiles Protein kinase domain profile. 579 854 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0805 1188 FunFam Leucine-rich repeat receptor-like kinase 368 501 - -
Lac11g0805 1188 Gene3D Ribonuclease Inhibitor 371 490 IPR032675 -
Lac11g0805 1188 ProSitePatterns Protein kinases ATP-binding region signature. 585 606 IPR017441 GO:0005524(InterPro)
Lac11g0805 1188 Coils Coil 1104 1177 - -
Lac11g0805 1188 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 654 863 - -
Lac11g0805 1188 Gene3D Phosphorylase Kinase; domain 1 585 654 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0802 Lac-Chr11:8501784 Lac11g0805 Lac-Chr11:8528748 0.00E+00 dispersed
Lac11g0805 Lac-Chr11:8528748 Lac11g0811 Lac-Chr11:8628535 0.00E+00 dispersed
Lac13g0861 Lac-Chr13:7007242 Lac11g0805 Lac-Chr11:8528748 1.00E-24 dispersed
Lac3g1466 Lac-Chr3:13370265 Lac11g0805 Lac-Chr11:8528748 3.20E-22 dispersed
Lac3g1838 Lac-Chr3:20454658 Lac11g0805 Lac-Chr11:8528748 1.90E-27 dispersed
Lac3g2577 Lac-Chr3:39055820 Lac11g0805 Lac-Chr11:8528748 4.10E-11 dispersed
Lac11g0805 Lac-Chr11:8528748 Lac11g0807 Lac-Chr11:8594433 3.60E-214 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85740 PF12819 Malectin_like 9.60E-103 CL0202 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0805 - - - 0.0