Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0810 ATGACAACAAAGCTACACGCAATTTTGGACCACCCCGATGTACGAGGAGCTGACGAGGACAATCGGACAGGAAGATGGACCAAGGAGGCAAAACCGGCAAGTGAGACGGGCCAAGACCGAAGGGGTCGGGTTTTAGGCCCGACCCCCTGCTCGGCCTCGGCCCATGGCCGAGGCCGAGCACATGGTCGGCCTCGGCCATGTGCCGAGGCCGACCCTCGGCTCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCCCCACTGCCTCTGGATGCCCCGGTTTCGCCCGCATCGGAGCCAGTGTGGCGAGCACCACACCGGTGCGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCTTCATCTACAAATCTACCGTTGATGGCACGTGGAGATACAAAGATGACGTTTATGATCGCATTTGGGTACCCACCATGGCTCCACTCCCAGAATCGACTTCAATAACCACATCGGACGAAATAGATGTCAGTGAGCCGTTGTTCTTCTTACCAGCTCAGGCGGTCATGAAGTCCGCGGCGACCCCGAGAGACGCCTCTGCTCCATTGGAATTCCACTTGATTCCACCAACCATCACCACAGAGTTTTTCATCTACCTGTACTTTTCAGAGTTTCTAAAGCTTCAAGCCAATGAGTCCAGAGTAGATTTATCCTCGAGTGGACTCACAGGAAGAATAGCTAGAGACATAGCAAATCTCACCTCACTAGAAACTTTGGATTTATCAAACAATAACTTGAGTGGACCAGTGCCTGAGTTTCTTGCTCAATTGCCATCACTGAAGATCCTAAATTTGGAAAGAAACGACCTTTCAGGACTTATTCCTTCTCAACTCATTAAAAACTCTAATGATGGCCTTTTAAACTTAAGCTTCGGTCAGAATCCAAACTTGTTCATCACAACTCCGAGTGAAGAAAAGAAACGAAACATAATTGTTCCTGTACTAGCATCAGTTTGTGGATTTGTGCTGCTTTTGTTCTTGATTTTAGGTGTTATCTTTTGGATCAAGACTAAACAAAGAAAACAAGGTGTTGAGATTGGAAGAACAAAACAAAATGTCGACCAGTTTGAAGAACGGGGTGCAACCAGAAAATGTTATTCTTACTCTGATATATTGAGAATGACAAACAATTTTGAACGACTTCTCGGAGAAGGTGGCTTTGGAAGAGTTTACTATGGTCAAATCAATAACACTGAAGTAGCTGTTAAGATGCTTTCTCCTCAATCAGCTCAAGGGTATCAACAATTTCAGACAGAGGTTGACCTTCTCATGAGGGTTCATCACAAAAACTTGACTGAACTTGTTGGATATTGTAATGAATCAACCAATAAAGGACTAATCTATGAATACATGGGGAGAGGGAACTTGGAATCTCTTATCTCAGGTGCACGATCAGGGAAGGTTTTGAATTGGAAAGATAGGCTTCTTATAGCAATGAATGCAGCACATGGATTGGAGTACCTTCACCACAGTATCAAACCAGCCATAATACATAGAGATGTAAAATCTACAAACATCTTATTGGACGATAATTTTCGAGCAAAAGTGTCTAATTTTGGATTATCGAGAATTTTTCCTATGGAAGGTAGCACCACTCATGTGACAGCTACCAATGTAGTCGGTACTCATGGCTACATTGACCCAGAGTACCACGTGTCGTTTAGATTAAATGAGAAAAGTGACGTTTATGGATTTGGAGTTATTCTTCTTGAAATCATTACTGGAAAACCAGCTTTGATAAGAACTAAAGACCAAGTAACTCATGTCTATCAATGGGTCAAGCCCTTGCTTTCTCAAGGTGATATTCAATCTATCATCGACCCACAAATAAAAGAAGATTTGGATGTGAACTCTATCTGGAAAGCAGTTGACTTAGCAATGTATTGTGCATCTTCGAAATCAATAGATAGGCCCAACATGAGTGAAGTTCTGATCGAGTTGAAAGAATGTTTGGCCATGGAATTGGCTCGTCATAATCATAGACAATCTGAATCTGTTGTTGTAGATTCCAGCATTATATCTGAACCATCGGCAAGGTAG 2058 44.22 MTTKLHAILDHPDVRGADEDNRTGRWTKEAKPASETGQDRRGRVLGPTPCSASAHGRGRAHGRPRPCAEADPRLARAGRARSVSSGPHCLWMPRFRPHRSQCGEHHTGAQVYCLAGHVFPFIYKSTVDGTWRYKDDVYDRIWVPTMAPLPESTSITTSDEIDVSEPLFFLPAQAVMKSAATPRDASAPLEFHLIPPTITTEFFIYLYFSEFLKLQANESRVDLSSSGLTGRIARDIANLTSLETLDLSNNNLSGPVPEFLAQLPSLKILNLERNDLSGLIPSQLIKNSNDGLLNLSFGQNPNLFITTPSEEKKRNIIVPVLASVCGFVLLLFLILGVIFWIKTKQRKQGVEIGRTKQNVDQFEERGATRKCYSYSDILRMTNNFERLLGEGGFGRVYYGQINNTEVAVKMLSPQSAQGYQQFQTEVDLLMRVHHKNLTELVGYCNESTNKGLIYEYMGRGNLESLISGARSGKVLNWKDRLLIAMNAAHGLEYLHHSIKPAIIHRDVKSTNILLDDNFRAKVSNFGLSRIFPMEGSTTHVTATNVVGTHGYIDPEYHVSFRLNEKSDVYGFGVILLEIITGKPALIRTKDQVTHVYQWVKPLLSQGDIQSIIDPQIKEDLDVNSIWKAVDLAMYCASSKSIDRPNMSEVLIELKECLAMELARHNHRQSESVVVDSSIISEPSAR 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8617789 8622175 + Lag0031448.1 Lac11g0810 586668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0810 685 MobiDBLite consensus disorder prediction 8 38 - -
Lac11g0810 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0810 685 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 457 666 - -
Lac11g0810 685 MobiDBLite consensus disorder prediction 1 66 - -
Lac11g0810 685 Gene3D Ribonuclease Inhibitor 211 294 IPR032675 -
Lac11g0810 685 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0810 685 PANTHER OS07G0107800 PROTEIN-RELATED 221 663 - -
Lac11g0810 685 SMART serkin_6 382 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0810 685 Gene3D Transferase(Phosphotransferase) domain 1 457 680 - -
Lac11g0810 685 ProSitePatterns Protein kinases ATP-binding region signature. 388 409 IPR017441 GO:0005524(InterPro)
Lac11g0810 685 Pfam Leucine rich repeat 222 276 IPR001611 GO:0005515(InterPro)
Lac11g0810 685 FunFam Leucine-rich repeat receptor-like kinase 211 305 - -
Lac11g0810 685 PRINTS Leucine-rich repeat signature 263 276 - -
Lac11g0810 685 PRINTS Leucine-rich repeat signature 242 255 - -
Lac11g0810 685 FunFam Leucine-rich repeat receptor-like protein kinase 356 456 - -
Lac11g0810 685 SUPERFAMILY Protein kinase-like (PK-like) 366 653 IPR011009 -
Lac11g0810 685 Pfam Malectin-like domain 129 220 IPR024788 -
Lac11g0810 685 Gene3D Phosphorylase Kinase; domain 1 366 456 - -
Lac11g0810 685 CDD STKc_IRAK 388 655 - -
Lac11g0810 685 SUPERFAMILY L domain-like 202 303 - -
Lac11g0810 685 Pfam Protein tyrosine and serine/threonine kinase 384 648 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0807 Lac-Chr11:8594433 Lac11g0810 Lac-Chr11:8617789 7.80E-213 dispersed
Lac11g0810 Lac-Chr11:8617789 Lac11g0812 Lac-Chr11:8678619 5.80E-169 dispersed
Lac6g0517 Lac-Chr6:4328748 Lac11g0810 Lac-Chr11:8617789 6.20E-54 dispersed
Lac6g0853 Lac-Chr6:7460453 Lac11g0810 Lac-Chr11:8617789 5.90E-22 dispersed
Lac9g1453 Lac-Chr9:32838965 Lac11g0810 Lac-Chr11:8617789 9.50E-31 dispersed
Lac11g0810 Lac-Chr11:8617789 Lac11g0811 Lac-Chr11:8628535 2.00E-214 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85742 PF07714 PK_Tyr_Ser-Thr 3.30E-41 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0810 - - - 0.0