Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0811 ATGGCCGCTGTCCTCAATTACTTCCTCCTTTCTCTTCTCTCCCTTTCTGCTCTCCTATCTTTCGTTTTCAGCCAGAATCCTCCAGGCTTCCTCAGTTTAGATTGTGGACTTCCAATGGATGTCAAGTATGAAGAGTCCAATAGCGGAATAATCTATGACTCTGATGCAGCATACATTGAAACTGGTACAATTCACAACATATCTTCCAATAGCATAAAAAACCACAACCAACAGTTATGGAGTCTAAGAAGCTTTCCTGAAGGGACCAGAAATTGCTACAAAGTTAGAGTAAAAGTCGACACCAAGTATTTGATTCGAGCTAGTTTTCTATACGGTGACTATGACGGTCGAAGAAAACTCCCTAGCTTCGATCTCCACTTCGGACCCAACTTTTGGACTTCTGTCAATCTTGATGCAATCGACATGGTGAAGCATTTGGAGATTATACATGTTTTTTCTTCCAATTATGCACAAGTTTGCCTCATCAACACTGGTGCCGGAACTCCGTTCATTTCGGCTCTTGAGCTAAGGCCTTTAAACAACTTGTCTTACCCAACAGAGTCACCGTCGATGTCACTAGCCAATTTCTTCCGCTTCGATGTGGGTTCTGTTAACAACCAAACTTACAGATACAAAGATGACGTTTACGATCGCATTTGGGTGCCCATGGCTCCAATCCCAGAATGGACTTCAACAACCACACCAAACCTAATAAATGTCAATGACCCATTGTTCTTCAATCCAGCTCCAATGGTCATGAATTCTGCGGCGACTCCAAAAGACGCCTCTGCGCCATTACAATTTCACTGGGTTTCACCAACCAACACCGCACAATTTTTTTTTTACATGTACTTCACAGAGTTTCTAAAGCTTCAATCCAATGAGTCCAGAGTGTTTGACATCATGCTCAATGGGGGGTTTTGGCATAATAAAAGTAAATTAATTTCTCCAACTTACTTGAACGAATATGTCGTTTACAGTACTAAACCGTTGACTGGTGGAATGTTCAATTTCTCAATTGTCAAAACCGTCAATTCCACTCTTCCTCCAGTCCTCAACGCCATTGAAGCTTATACGGTCATTAATTTTTTTCTATCTGAGACAAACCAACAAGATGTTGAGGGCATTTCAAATATCAAGAAAGTGTATGGAGTTGAAAGAAATTGGCAAGGAGATCCTTGTGCCCCAACAGAATTCATTTGGCAAGGACTCAAATGTAGCTCTGTGGATGATTCTGAGCCTCCTAGAATTACATCCTTGAATTTGTCCTCTAGTGGACTCACGGGGAAAATAGCTAAAGACATAGCATATCTCACAATGCTAGAAACTCTGGATTTATCAAACAATAACTTAAGTGGAACAGTACCTAACTTTCTTGCTCAGTTGCCATCATTGAGGGTCTTAAATTTAGAAAGAAACCAACTTTCAGGACTTATTCCTACTCAACTCATTGAAAAATTCAATGATGGTATTTTAAACTTAAGCTTCGGTGAAAATCCAAATTTGTTCATCACAATCCCAAGTGAAGGAAAGAAACGCAACATAGTTGTTCCTGTACTAGCATCAGTTTGCGGATTTGTTCTCCTTTTGTTCTTGATTTTCGGTGTTATCTTTTGGATCAAGACTAAACAAATAAAACAACTAGTTGCTGTGATTGGAACAACGAATCAAAATGTTGGCCAATCTCAACAATGGAGTGCAACCAAAAAATGCTATTCTTACTCTGATATCTTGAGAATGACAAACAATTTTGAGCGACCTCTCGGAGAAGGTGGCTTTGGAAGAGTTTATTATGGTCAGATCAACAACACTCAAGTAGCTGTTAAGATGCTTTCTCCTCAATCAACTCAAGGGTATCAACAATTTCAAACAGAGGTAGACCTTCTCATGAGGGTTCATCACAAAAATTTAATTGGTCTTGTTGGATATTGTAATGAATCAACCAATAAAGGACTAATCTATGAATACATGGAGAATGGGAACTTAGGATCTCTTATTCCAGGTGGCCGATCAACAAAGGTTTTGGATTGGAAAGATAGGCTTCTTATAGCAGTGGATGTAGCACATGGATTAGAGTACCTTCATTATGGTATCAAACCAGCTATAATCCATAGAGATGTAAAACCTACAAACATCTTATTGGACAACAATTTTCAAGCAAAAGTAGCTGATTTTGGGTTATCAAGAATTTTTCCTATGGAAGGCGGCATCACTCATGTGACAACCACCAATGCTGTTGGTACTCATGGCTACATTGATCCAGAGTACCACTCAACGTTCAGATTAAACGAGAAGAGTGATGTTTATGGATTTGGAGTGATTCTTCTCGAAATCATAACTGGAAAGCCGGCTTTGATAAGAACTGAAGACGAAGTAATTCATGTCTATCAATGGATCAAGCCCTTGTTCTCCCAAGGCAATATTCAGTCGATCATCGACCAGAAAATTGAAGGAGATGTAGATATGAACTCTGTTTGGAAAGCAGTGGACATAGCAATGTGTTGTGTATCTGTAAAATCCGTGGATAGGCCAAATATGAGTCAAGTTTTAGTGGAGTTGAAGGAATGTTTGGCCATCGAATTCGCTCATCATAATCATAGTCAACCTGATTCAGTTGTCGCAGATTCTAGTGTCCTATTTGGTCCCACAGCAAGTTGGTGGTCGAAGCTCCCCTTTCTCAAACCACGAAACCTCCGCGCGACCGTCGCTCCCTTCGATTCCGGTCTGAAACGAAGGGGATTCCCCCTTCGTTTCAAACCACGATTCGAGCTTGAAACGGGAGCGGCGTGCTACGATTCAGACCCACGACGAGGACGATCCCAGATCTGTTTGTGCTCGCGGGGGAGCGAAGGGGACGATCCCCCCTTTGTTTCAAACCACGATTCAAGCTTGAAACGGGAGCGGCGTGCAACGATTCAGACCCACGACGAGGACGATCCCAGCACTGAAGCGATTCGTTTCATGTTGTGCTCGTGGTTCCAGTCTGAAACGAATCGCTTCAGCTCCTCCTTCTCAGACCACGAAACCTCTGATAACCATGTTGTGCTCGCGGTTGTGCTCAAGAGGGAGGGCTTCGCGATTTGCTCGCGGTTGTGCTCAAGAGGGAGTCGTGATTGTGCTCGAGAGGGAGGGCTTCGACGAGAGGGAAATGAAGAAATGGGGAAAGAAAAGATGAAGGAAATGAGACTAAAATTTAAAAAAAAAACAACAAAAAAAAAAGACGGCGACGGCGGTCGTTCCCAGCAACGACGATTGCCGGCGGTCGGTCGCTGGTGGGAGGTGATTTTGGACCACTACGGTGTACAAGGAGCTGACGAGGACGACCGAGCGAAAATAGGACTGGGAGATGGACCCCAGAGGCAAAACTGGCAAGTGGAACGGGCCAAGACCGAGCCCGACCCCCTTGCTCTACCTCGGCCCAAGGCTGATGGTCGAGGCCGAGTCCCTCCGACTCGGTTCGATACATGTAGCCTCTAG 3477 43.34 MAAVLNYFLLSLLSLSALLSFVFSQNPPGFLSLDCGLPMDVKYEESNSGIIYDSDAAYIETGTIHNISSNSIKNHNQQLWSLRSFPEGTRNCYKVRVKVDTKYLIRASFLYGDYDGRRKLPSFDLHFGPNFWTSVNLDAIDMVKHLEIIHVFSSNYAQVCLINTGAGTPFISALELRPLNNLSYPTESPSMSLANFFRFDVGSVNNQTYRYKDDVYDRIWVPMAPIPEWTSTTTPNLINVNDPLFFNPAPMVMNSAATPKDASAPLQFHWVSPTNTAQFFFYMYFTEFLKLQSNESRVFDIMLNGGFWHNKSKLISPTYLNEYVVYSTKPLTGGMFNFSIVKTVNSTLPPVLNAIEAYTVINFFLSETNQQDVEGISNIKKVYGVERNWQGDPCAPTEFIWQGLKCSSVDDSEPPRITSLNLSSSGLTGKIAKDIAYLTMLETLDLSNNNLSGTVPNFLAQLPSLRVLNLERNQLSGLIPTQLIEKFNDGILNLSFGENPNLFITIPSEGKKRNIVVPVLASVCGFVLLLFLIFGVIFWIKTKQIKQLVAVIGTTNQNVGQSQQWSATKKCYSYSDILRMTNNFERPLGEGGFGRVYYGQINNTQVAVKMLSPQSTQGYQQFQTEVDLLMRVHHKNLIGLVGYCNESTNKGLIYEYMENGNLGSLIPGGRSTKVLDWKDRLLIAVDVAHGLEYLHYGIKPAIIHRDVKPTNILLDNNFQAKVADFGLSRIFPMEGGITHVTTTNAVGTHGYIDPEYHSTFRLNEKSDVYGFGVILLEIITGKPALIRTEDEVIHVYQWIKPLFSQGNIQSIIDQKIEGDVDMNSVWKAVDIAMCCVSVKSVDRPNMSQVLVELKECLAIEFAHHNHSQPDSVVADSSVLFGPTASWWSKLPFLKPRNLRATVAPFDSGLKRRGFPLRFKPRFELETGAACYDSDPRRGRSQICLCSRGSEGDDPPFVSNHDSSLKRERRATIQTHDEDDPSTEAIRFMLCSWFQSETNRFSSSFSDHETSDNHVVLAVVLKREGFAICSRLCSRGSRDCAREGGLRREGNEEMGKEKMKEMRLKFKKKTTKKKDGDGGRSQQRRLPAVGRWWEVILDHYGVQGADEDDRAKIGLGDGPQRQNWQVERAKTEPDPLALPRPKADGRGRVPPTRFDTCSL 1158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8628535 8638235 + Lag0031449.1 Lac11g0811 586669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0811 1158 Gene3D Transferase(Phosphotransferase) domain 1 657 875 - -
Lac11g0811 1158 Pfam Leucine rich repeat 415 475 IPR001611 GO:0005515(InterPro)
Lac11g0811 1158 Pfam Malectin-like domain 33 360 IPR024788 -
Lac11g0811 1158 CDD STKc_IRAK 588 855 - -
Lac11g0811 1158 Gene3D Ribonuclease Inhibitor 375 491 IPR032675 -
Lac11g0811 1158 PRINTS Leucine-rich repeat signature 462 475 - -
Lac11g0811 1158 PRINTS Leucine-rich repeat signature 441 454 - -
Lac11g0811 1158 FunFam Leucine-rich repeat receptor-like kinase 371 504 - -
Lac11g0811 1158 Pfam Protein tyrosine and serine/threonine kinase 584 852 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0811 1158 ProSiteProfiles Protein kinase domain profile. 582 857 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0811 1158 SUPERFAMILY Protein kinase-like (PK-like) 558 853 IPR011009 -
Lac11g0811 1158 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 657 866 - -
Lac11g0811 1158 FunFam Leucine-rich repeat receptor-like protein kinase 556 656 - -
Lac11g0811 1158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0811 1158 SUPERFAMILY L domain-like 387 485 - -
Lac11g0811 1158 SMART serkin_6 582 857 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0811 1158 ProSiteProfiles Leucine-rich repeat profile. 440 462 IPR001611 GO:0005515(InterPro)
Lac11g0811 1158 PANTHER OS07G0107800 PROTEIN-RELATED 24 862 - -
Lac11g0811 1158 ProSitePatterns Protein kinases ATP-binding region signature. 588 609 IPR017441 GO:0005524(InterPro)
Lac11g0811 1158 MobiDBLite consensus disorder prediction 1132 1148 - -
Lac11g0811 1158 MobiDBLite consensus disorder prediction 1107 1158 - -
Lac11g0811 1158 Gene3D Phosphorylase Kinase; domain 1 555 656 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0805 Lac-Chr11:8528748 Lac11g0811 Lac-Chr11:8628535 0.00E+00 dispersed
Lac11g0811 Lac-Chr11:8628535 Lac11g0825 Lac-Chr11:8823229 5.20E-226 dispersed
Lac2g1825 Lac-Chr2:18069051 Lac11g0811 Lac-Chr11:8628535 8.90E-20 dispersed
Lac8g1563 Lac-Chr8:33295895 Lac11g0811 Lac-Chr11:8628535 1.90E-40 dispersed
Lac11g0810 Lac-Chr11:8617789 Lac11g0811 Lac-Chr11:8628535 2.00E-214 tandem
Lac11g0811 Lac-Chr11:8628535 Lac11g0812 Lac-Chr11:8678619 1.50E-289 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85743 PF12819 Malectin_like 7.60E-103 CL0202 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0811 - - - 0.0