Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0812 ATGGCAACTCTCCGATTCTGCATCCTCGTTCTTCTTTCCACTTTCGCTCTCTGCAAATTCTTCGTCTCTGCACAGAATCCTTCAGGTTTCATCAGTATAGACTGCGGAATTCCCGCGAACTCCACCTACACAGATCAGATCACCGGAATAGTCTACGAATCCGATGCGGCGTTCGTAAGTTCCGGCGAAGTCCACAACATTTCGGCGGATAGCATGCAGGAAGGCTTGAAACAGCCGCTGTGGAATTTGAGGAGCTTTCCGGAAGGAATGAGGAATTGCTACAAATTGAAAGTGAGGTTAGGGAAGAAGTATTTGATTCGAGCGGCTTTTATGTACGGGAATTACGATGGGCGAAGGGATTTGCCTGAATTTGATCTGTATTTTGGAGCGAACCTGTGGGCTAGGATTGCGTTTGAGGATGATTCTCCGATGAGTAAGGAGATTTTGCATATTGTTTCGTCGAGTGAAGTACAAATCTGCGTTGTGAATGTTGGAACTGGAATTCCGTTCATTTCGGTTCTGGAATTGAGGCCTCTGGAAGACCGTGCTTACGAGACGGGATCTCTGACGTTGGCTGCTTTCTCACGCGAAGATTTTGGCTCTAACAGGAATCAAGTTATCAGGTATAAAGACGACGCCTACGATCGAATCTGGAGTCCATCGGTCCCGGTCCAAGGAGTGACTACCATAAACACTTCGGAGCAAGTTTCCGTCGACGACCCGCTCTTCTTCCAGCCGGCTCCGGCGGTCATGAACACGGCGGAGACGCCGATCAACGCAAGCGATACGATAGGTTACTTTTGGCTGCCCACGGATCCCACGGCCGCATATTTCCTCTACTTGTACTTTGCGGAGCTGAAGGTGCTTCAAGCCAACGAGTCCAGACAGTTCGACGTATTACTGAATGGAAAACGGTGGCATAATGAATCGATTTCTCCTCGCTATTTATCCGAAATGGCCTTGTTCAGTACCTCACCTATGACTGGCGGAACCTACGAGATCACCCTCGTCAAAACTGCCAATTCAACCCTTCCTCCCATCCTCAATGCTGTTGAGGTTTATGAAGTCGTCAACTTCTCGCAATCCGACACCAGTGGACAAGATGTTGTGGCAATTGAAAATATCAAGACAATTTATGGAGTTAGAAGAAACTGGCAGGGAGATCCCTGTGCCCCAAGGAGATTCATTTGGCAAGGAGTCAACTGCAGCTTTGTGGATTCTGAGCCTCCCAGAATCATATCCTTGGATTTGAACTCCAGTGGACTCACAGGAGAAATACCTCGAGATATCGGAAATCTTAAAATGCTGGAGACTCTAGATCTATCAAACAATAATTTGACCGGACCAGTGCCTGAATTTCTCGCTCAATTGCCATCCTTGCGAGTCCTAAACTTGGAAAAAAACAAGCTTTCAGGACTAATACCAGCCCAGCTCGTAGAGAAGTCCAATAATGGCTCTCTGTTATTAAGATTTGGCGAAAATTCAAATCTGTTTACTACGCCTCCAAGCAAAAAGAAGAGAACCAATGTTGTTGCTCCTGTAGTAGCCTCAGTTGTTGGATTTCTTCTGCTGTCATTCTTAATTGCAGTGGCTATCTTTTGGAGGACAAAAAGAAGAAAATCGAAAGGAGCTGTAATTGGAGTGGCGAAACAAACTGTTGATAATTCTCAAAATTTGGACACGGCTAGGAGATGCTATTCATACTCGGATGTTCTAAGAATGACAAACAATTTCGAGCACGTGCTTGGAGAAGGTGGCTTTGGACGAGTTTACTACGGCAAAGTCGAGAATGTTGAAGTAGCTGTAAAAATGCTATCTCCTCGTTCAGTTCAAGGATATCAACAATTTCAAGCAGAGGTTGACCTTCTTATGAGGGTTCATCATAGAAACTTGACTGGTCTTGTTGGGTATTGCAATGAACCGACCAACAAAGGACTTATCTATGAGTACATGGGCAAAGGGAACTTGGGATCTCTCATCTCAGATGGCAAGTCAGCTTTGTTGAACTGGAAAGACAGACTTCATATAGCAGTGGATGCAGCACAAGGGTTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGACGTAAAATCTTCCAACATCTTGTTGGATGACAACTTTCGAGCAAAAGTATCTGATTTTGGCTTGTCGAGAATTTTTCCCGTCGACGATGGTGCCACTCATGTGACAACGAATGTGGTTGGCACTCCTGGTTACCTCGACCCTGAATACTACACATCCTATAGATTAAATGAGAAAAGTGATGTTTATGGCTTCGGAATTGTTCTTCTAGAAATCATAACTGGAAGACCAGTTTTGACAAAGTCTGTAGACAAGGTAACTCACATCTATCAATGGGTTAACTCGATGCTTTCTCAAGGTGATATCAACTCCATTATTGATCCGAAATTGAAAGAAGATTTTGATGTTAACACCATTTGGAAAGCGGTCGAAATAGCGATGTCATGTGCATCTCCCGCTTCTACAAACAGGCCAACCATGAGCCAAGTTGTGATAGATTTGAATGAATGTTTGAATGCTCACAATAATAACTATCTTCAACCTGAATCAGTCGTTGAAGATCAGATTTCTCTGTTTGGTCCAGAAGCAAGGTAG 2628 44.41 MATLRFCILVLLSTFALCKFFVSAQNPSGFISIDCGIPANSTYTDQITGIVYESDAAFVSSGEVHNISADSMQEGLKQPLWNLRSFPEGMRNCYKLKVRLGKKYLIRAAFMYGNYDGRRDLPEFDLYFGANLWARIAFEDDSPMSKEILHIVSSSEVQICVVNVGTGIPFISVLELRPLEDRAYETGSLTLAAFSREDFGSNRNQVIRYKDDAYDRIWSPSVPVQGVTTINTSEQVSVDDPLFFQPAPAVMNTAETPINASDTIGYFWLPTDPTAAYFLYLYFAELKVLQANESRQFDVLLNGKRWHNESISPRYLSEMALFSTSPMTGGTYEITLVKTANSTLPPILNAVEVYEVVNFSQSDTSGQDVVAIENIKTIYGVRRNWQGDPCAPRRFIWQGVNCSFVDSEPPRIISLDLNSSGLTGEIPRDIGNLKMLETLDLSNNNLTGPVPEFLAQLPSLRVLNLEKNKLSGLIPAQLVEKSNNGSLLLRFGENSNLFTTPPSKKKRTNVVAPVVASVVGFLLLSFLIAVAIFWRTKRRKSKGAVIGVAKQTVDNSQNLDTARRCYSYSDVLRMTNNFEHVLGEGGFGRVYYGKVENVEVAVKMLSPRSVQGYQQFQAEVDLLMRVHHRNLTGLVGYCNEPTNKGLIYEYMGKGNLGSLISDGKSALLNWKDRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFRAKVSDFGLSRIFPVDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKSVDKVTHIYQWVNSMLSQGDINSIIDPKLKEDFDVNTIWKAVEIAMSCASPASTNRPTMSQVVIDLNECLNAHNNNYLQPESVVEDQISLFGPEAR 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8678619 8685489 + Lag0031450.1 Lac11g0812 586670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0812 875 ProSiteProfiles Protein kinase domain profile. 576 849 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0812 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0812 875 Gene3D Phosphorylase Kinase; domain 1 548 650 - -
Lac11g0812 875 Gene3D Ribonuclease Inhibitor 371 488 IPR032675 -
Lac11g0812 875 Gene3D - 198 357 - -
Lac11g0812 875 FunFam Leucine-rich repeat receptor-like protein kinase 554 650 - -
Lac11g0812 875 Pfam Protein tyrosine and serine/threonine kinase 578 844 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g0812 875 SUPERFAMILY Protein kinase-like (PK-like) 560 845 IPR011009 -
Lac11g0812 875 FunFam Leucine-rich repeat receptor-like kinase 355 499 - -
Lac11g0812 875 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524(InterPro)
Lac11g0812 875 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 651 857 - -
Lac11g0812 875 Pfam Leucine rich repeat 414 470 IPR001611 GO:0005515(InterPro)
Lac11g0812 875 PRINTS Leucine-rich repeat signature 436 449 - -
Lac11g0812 875 PRINTS Leucine-rich repeat signature 457 470 - -
Lac11g0812 875 PANTHER OS07G0107800 PROTEIN-RELATED 22 853 - -
Lac11g0812 875 SMART serkin_6 576 849 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac11g0812 875 SUPERFAMILY L domain-like 383 483 - -
Lac11g0812 875 Pfam Malectin-like domain 33 356 IPR024788 -
Lac11g0812 875 Gene3D Transferase(Phosphotransferase) domain 1 651 868 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0810 Lac-Chr11:8617789 Lac11g0812 Lac-Chr11:8678619 5.80E-169 dispersed
Lac11g0812 Lac-Chr11:8678619 Lac11g0819 Lac-Chr11:8742219 3.40E-238 dispersed
Lac3g1130 Lac-Chr3:9414838 Lac11g0812 Lac-Chr11:8678619 3.30E-54 dispersed
Lac11g0811 Lac-Chr11:8628535 Lac11g0812 Lac-Chr11:8678619 1.50E-289 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85744 PF12819 Malectin_like 2.50E-106 CL0202 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0812 - - - 0.0