Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0888 ATGGGATCGGAGCAGTTGATGGCCGGAGGCGGGCCTCGATACGTTCAAATGCAATCGGAGCCGCCTACGGCTTCGATGTCGTCCTTTTTCTCGTTCCATCAGGACGCTCCTGAGCCGACGAGGATTTTCGATGAGTTACCGAAGGCCACAATCATTTCCGTATCTCGCCCTGATGCCGGCGATATCAGTCCGATGCTCCTTTCTTATACAATCGAATGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTCTATTTGCATTTTGCATTAAAGAAACGGGCGTTCATTGAGGAAATTCATGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAAAACACAACAGTCCCAGATGAGGATGGACCAGATGATGAGACCGATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCATCCAGCGCTGCCCTGCCTATTATTCGGCCAGCCTTAGGAAGGCAGCAGTCTATGTCTGATAGAGCTAAGAATGCAATGCAAGGGTATCTCAATCACTTCTTGAGTAACATGGATATCGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAACTTATCATTTTCACCGGAATACGGCCCAAAGTTGAAAGAGGATTATGTCATGGTGAAACATCTACCTAAAATTGCAAAGGAAGATGACTCTAGGAAATGTTGTCTATGCCTATGGTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGCTTTTTGGCCTTGTTGGGAGATCCTTTTGATACCCAACCAATGGATATTATAGTTTTTGATGTGCTACCTACTTCTGATGGCAATGGAGATGGACGAGTATCTTTGGCTAAGGAAATTAAGGAGCGAAATCCATTACGACATTCATTTAAGGTGACGTGTGGAAATAGGAATATTAGGATAAGAGCAAAGAATGGATCCAAGGTTAAAGATTGGGTTGCTGCAATCAATGATGCTGGACTGAGGCCTCCTGAGGGCTGGTGTCATCCTCACCGTTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACTGAAGATGGTAGTAAGGCTCAGTGGTTTATCGATGGCCTAGCAGCTTTTGAAGCTATTGCCTTTTCCATTGAACGTGCAAAATCAGAGATTTTCATTTGTGGCTGGTGGCTTTGCCCAGAATTGTATCTGCGGCGTCCCTTTATTTCAAATGCTTCATCTAGGCTCGACGCATTACTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATACTTCTATACAAAGAGGTTGCCCTTGCTTTAAAAATTAACAGTGTTTATAGCAAGAGAAAACTTCTCGGCATCCATGAGAATGTGAGAGTATTAAGATACCCTGACCACTTCTCCAGTGGCGTGTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATTATCATATTTGCTTTATCGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCAGAACATAAAGTTGGCGACTGTCCTCCTTCAGTATGGCCTGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAAAGATGAGTTGGATCGTGGGAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAATGAGCAAGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAGTAGCCGAGAGTTGGAGGTTGAAAAGAAGAATTTTGACAATCCTAAAGGAACAACAATGCAGGATTCATTTTCTCGAGGATCATCTTTTCACGACATTCCATTGCTTTTGCCTCAAGAAGCTGATGGACCAGATGATCAAAATGAAGATTCAAAAGTAAATGGACTGGAGCCCGTTGCTATTCCCCTTGATCAGCCAAGTAAGATCAGCAGCGGTCTCTCGTTCTCTTTCAGGAAGATCAAAGTTGAACCCATAGGTCCAGATATGCCTCTGAAAGGCTTTGTTGATGATTTTGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGAAGGGAAAAAAGCACATCATCGTGTCATAAGTAGTTCAGATTTTGAGTGGTGGGAAACACAAGATAGGGGACATCATGGTGGCTTCACCGATGAATCTGGACAAGTTGGTCCATGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAGTGGTCTGCTGGGACAAGCCAAACTGAAGAGAGCATTCACATTGCATATTGCTCTCTTATAGAGAAAGCAGAACATTTTATCTATATTGAGAATCAATTTTTTATATCAGGCCTCTCAGGAGATGATTCAATACGTAATCGCGTGTTAGAAGCCTTATACCGCCGCATAATGAGAGCCTACCGTGAAAAGAAGACTTTTAGGGTTATTATTGTCGTACCACTGTTACCTGGATTTCAGGGGGGTCTGGATGACAGTGGTGCAGCATCAGTTAGAGCTATAATGCATTGGCAGTATCGAACTATATGTCGAGGACAGAATTCAATATTACATAATCTTTATGAAGTTCTTGGTTCAAAAGTTCATGATTATATATCATTCTTTGGCCTCAGAGCTTATGGTAAACTCTTTGATGGTGGTCCTGTGGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATTATCGATGATTGCATTGCTTTGATTGGGTCGGCTAACATCAACGACAGGAGTTTACTTGGTTCTAGGGATTCTGAGATTGCTATCGTTATTGAAGATAACGAACTTATGAATTCATATATGGGAGGACAACCATGGAAAGCGGGAAAGTTTTGTTGGAGTCTCCGTCTCTCTCTTTGGTCTGAACATCTCGGTCTTCGTCCCGGACAGATCAATCAAATAGTTGACCCAGTTTGCGATTCAACCTACAAGGATACGTGGATGGCAACTGCTAAGACAAACACAACAATATACCAGGATGTTTTCTCTTGCCTTCCAAATGACCTGATAAATTCCAGAGCTGGACTGAGACAAAGCGTCGCGTTCTGGAAAGAGAGACTGGGCCACACCACAATAGATTTAGGAATTGCACCTGAGAAGCTTGAGTTTTATAAGAATGGAGAAATTGAAAGGATTGATCCAGTAGAGAGATTAAGTTCAGTGAAGGGGCATCTTGTTTCCTTCCCATTGGAATTCCTCAGCAAAGAAGATTTGAGACCTGTGTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTGA 3345 42.84 MGSEQLMAGGGPRYVQMQSEPPTASMSSFFSFHQDAPEPTRIFDELPKATIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGENTTVPDEDGPDDETDPLHHDESSKNRDVPSSAALPIIRPALGRQQSMSDRAKNAMQGYLNHFLSNMDIVNSREVCRFLEVSNLSFSPEYGPKLKEDYVMVKHLPKIAKEDDSRKCCLCLWFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDGNGDGRVSLAKEIKERNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTEDGSKAQWFIDGLAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWSSRELEVEKKNFDNPKGTTMQDSFSRGSSFHDIPLLLPQEADGPDDQNEDSKVNGLEPVAIPLDQPSKISSGLSFSFRKIKVEPIGPDMPLKGFVDDFDHLDSHGKLSGEGKKAHHRVISSSDFEWWETQDRGHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKTFRVIIVVPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYEVLGSKVHDYISFFGLRAYGKLFDGGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELMNSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVCDSTYKDTWMATAKTNTTIYQDVFSCLPNDLINSRAGLRQSVAFWKERLGHTTIDLGIAPEKLEFYKNGEIERIDPVERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9601803 9612923 + Lag0031526.1 Lac11g0888 586746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0888 1114 Coils Coil 98 118 - -
Lac11g0888 1114 MobiDBLite consensus disorder prediction 122 152 - -
Lac11g0888 1114 PIRSF PLD_euk 697 1114 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Lac11g0888 1114 PIRSF PLD_euk 34 627 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Lac11g0888 1114 SMART pld_4 911 938 IPR001736 GO:0003824(InterPro)
Lac11g0888 1114 SMART pld_4 476 503 IPR001736 GO:0003824(InterPro)
Lac11g0888 1114 PANTHER PHOSPHOLIPASE D 171 1095 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Lac11g0888 1114 Pfam Phospholipase D Active site motif 476 503 IPR001736 GO:0003824(InterPro)
Lac11g0888 1114 SUPERFAMILY Phospholipase D/nuclease 751 959 - -
Lac11g0888 1114 CDD PLDc_vPLD1_2_yPLD_like_1 369 514 - -
Lac11g0888 1114 Gene3D Endonuclease Chain A 741 968 - -
Lac11g0888 1114 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 911 938 IPR001736 GO:0003824(InterPro)
Lac11g0888 1114 Gene3D Endonuclease Chain A 364 601 - -
Lac11g0888 1114 SUPERFAMILY Phospholipase D/nuclease 321 596 - -
Lac11g0888 1114 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 476 503 IPR001736 GO:0003824(InterPro)
Lac11g0888 1114 Gene3D - 242 339 IPR011993 -
Lac11g0888 1114 Pfam PLD-like domain 913 960 IPR025202 -
Lac11g0888 1114 SUPERFAMILY PH domain-like 245 339 - -
Lac11g0888 1114 FunFam Phospholipase 745 965 - -
Lac11g0888 1114 CDD PLDc_vPLD1_2_yPLD_like_2 771 955 - -
Lac11g0888 1114 ProSiteProfiles PH domain profile. 250 341 IPR001849 -
Lac11g0888 1114 CDD PH_PLD 192 339 - -
Lac11g0888 1114 SMART PH_update 215 343 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0888 Lac-Chr11:9601803 Lac1g3046 Lac-Chr1:51104677 4.00E-42 dispersed
Lac11g0888 Lac-Chr11:9601803 Lac6g2572 Lac-Chr6:43414622 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0888 K01115 - csv:101211856 2140.15