Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0889 ATGGTGCTGTTTCCGGCAGTTATTGAGGGAATGGTGAGAAATATGTCGATAAAGAAAAAGAATAATGATGTTTCAAAAAAAAAGAAGAAAAAGAATAATGAAGACGGCGGCAAAGAAGCGGCTCGAGAAATGGCGAAAGAGGCAAAAAGGAACAAATCGATGATTTGTTTATCCGGAAGTGTTAAAACAAGCAAGTTTGATGATATTTCTTCTGTTTGCTCCAAGAGAGGAAATAAAGGAACTAATCAGGATTCCTTGGTTGTTTGGGAGGACTATGGATGCCAAGAAGACATGGTTTTCTGTGGGATCTTTGATGGACATGGTCCGTGGGGCCACATGGTTAGCAAACATGTCATAAAGTCACTGCCTGCTCAATTATTGACCAATTGGCAACGAAAACTTTCAATGGAAGCCGACCAAAACCTTCTTCCTTCCAAAATATGGAAGCATTCTTGCTTAAAAACATATGCTGCCATTGATGAGGAGCTCAAGCAACACCCTCGCATTGATTCTTTTTACAGTGGCACGACGGCTTTGACAGTGGTTAAACAGGGCCGACATCTGGTTGTTGCAAATGCTGGCGATTCACGAGCTGTGTTGGCTGTAACTTCTGATGATGGCTGCTTGCATCCAGTTCAACTCTCCGTTGATTTCAGACCTAATTTACCTGAGGAGGCTGAGAGAATAAAGCAATCGAAAGGGCGGGTGGTATGTTTAAAAGACGAACCAGGCGTGTATAGAGTGTGGAGTCCGAAGTCGGGGACGCCAGGTTTGGCAATTTCAAGAGCATTTGGCGATTACTGCACCAAACAGTACGGCCTCATTTCTGTGCCTGATGTAACCCATCGAATCATTACCACTGGAGATCACTTTGTCATTGTGGCTACTGATGGGGTATGGGACGTCATGTCGAATCAGGAAGCAGTTCACATAGTTTCTTCAACGCCAAATAGGGAAATGTCGGCCAAAAGGCTAGTGGATTGTGCTGCTCTTGCATGGAAATCCAAGAAACGAGGCATTGCAAGGGACGACATATCGGCCATTTGCCTCTTTTTTCATGCTTCATCCTCAGAAAATCAGTGA 1083 44.04 MVLFPAVIEGMVRNMSIKKKNNDVSKKKKKKNNEDGGKEAAREMAKEAKRNKSMICLSGSVKTSKFDDISSVCSKRGNKGTNQDSLVVWEDYGCQEDMVFCGIFDGHGPWGHMVSKHVIKSLPAQLLTNWQRKLSMEADQNLLPSKIWKHSCLKTYAAIDEELKQHPRIDSFYSGTTALTVVKQGRHLVVANAGDSRAVLAVTSDDGCLHPVQLSVDFRPNLPEEAERIKQSKGRVVCLKDEPGVYRVWSPKSGTPGLAISRAFGDYCTKQYGLISVPDVTHRIITTGDHFVIVATDGVWDVMSNQEAVHIVSSTPNREMSAKRLVDCAALAWKSKKRGIARDDISAICLFFHASSSENQ 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9618874 9622743 + Lag0031527.1 Lac11g0889 586747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0889 360 Pfam Protein phosphatase 2C 72 329 IPR001932 -
Lac11g0889 360 PANTHER PROTEIN PHOSPHATASE 39 351 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac11g0889 360 SUPERFAMILY PP2C-like 68 353 IPR036457 -
Lac11g0889 360 SMART PP2C_4 59 350 IPR001932 -
Lac11g0889 360 CDD PP2Cc 69 352 IPR001932 -
Lac11g0889 360 ProSiteProfiles PPM-type phosphatase domain profile. 69 352 IPR001932 -
Lac11g0889 360 MobiDBLite consensus disorder prediction 21 44 - -
Lac11g0889 360 Gene3D - 59 355 IPR036457 -
Lac11g0889 360 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0889 Lac-Chr11:9618874 Lac3g2944 Lac-Chr3:46915633 2.90E-103 dispersed
Lac11g0889 Lac-Chr11:9618874 Lac6g2567 Lac-Chr6:43380901 3.40E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0889 - - - 0.0